RNA–Protein interactions for RNA: ENSMUST00000021921.10

Ptch1-201, Transcript of Protein patched homolog 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ptch1, Length 7,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1-201ENSMUST00000021921 Chmp4bQ9D8B3 224 aaKnown RBP18.7■□□□□ 0.58
Ptch1-201ENSMUST00000021921 Tpm3P21107 285 aaKnown RBP18.69■□□□□ 0.58
Ptch1-201ENSMUST00000021921 Tpd52l1O54818 204 aa18.68■□□□□ 0.58
Ptch1-201ENSMUST00000021921 IbspQ61711 324 aa18.68■□□□□ 0.58
Ptch1-201ENSMUST00000021921 MlecQ6ZQI3 291 aaKnown RBP18.68■□□□□ 0.58
Ptch1-201ENSMUST00000021921 Dnttip2Q8R2M2 758 aaKnown RBP18.67■□□□□ 0.58
Ptch1-201ENSMUST00000021921 Ccer2J3QPU5 274 aa18.66■□□□□ 0.58
Ptch1-201ENSMUST00000021921 Kiaa0754Q69ZZ9 979 aa18.66■□□□□ 0.58
Ptch1-201ENSMUST00000021921 Odf2A3KGV1 830 aaKnown RBP18.65■□□□□ 0.58
Ptch1-201ENSMUST00000021921 NudcO35685 332 aaKnown RBP18.65■□□□□ 0.58
Ptch1-201ENSMUST00000021921 Sox12Q04890 314 aa18.64■□□□□ 0.58
Ptch1-201ENSMUST00000021921 Tpm4Q6IRU2 248 aa18.64■□□□□ 0.57
Ptch1-201ENSMUST00000021921 Fnbp4Q6ZQ03 1031 aa18.64■□□□□ 0.57
Ptch1-201ENSMUST00000021921 Krt82Q99M74 516 aa18.63■□□□□ 0.57
Ptch1-201ENSMUST00000021921 Ppm1gQ61074 542 aa18.63■□□□□ 0.57
Ptch1-201ENSMUST00000021921 Taok2Q6ZQ29 1240 aa18.63■□□□□ 0.57
Ptch1-201ENSMUST00000021921 Ccdc43Q9CR29 222 aaKnown RBP18.63■□□□□ 0.57
Ptch1-201ENSMUST00000021921 KnstrnQ9D9Z1 312 aaKnown RBP18.63■□□□□ 0.57
Ptch1-201ENSMUST00000021921 Sall2Q9QX96 1004 aa18.62■□□□□ 0.57
Ptch1-201ENSMUST00000021921 Ppp1r18Q8BQ30 594 aa18.61■□□□□ 0.57
Ptch1-201ENSMUST00000021921 Ccdc96Q9CR92 584 aa18.61■□□□□ 0.57
Ptch1-201ENSMUST00000021921 Znf704Q9ERQ3 566 aa18.61■□□□□ 0.57
Ptch1-201ENSMUST00000021921 AU015836B2RUM3 263 aa18.6■□□□□ 0.57
Ptch1-201ENSMUST00000021921 RdxP26043 583 aaKnown RBP18.6■□□□□ 0.57
Ptch1-201ENSMUST00000021921 Anks4bQ8K3X6 423 aa18.6■□□□□ 0.57
Ptch1-201ENSMUST00000021921 BlmO88700 1416 aa18.59■□□□□ 0.57
Ptch1-201ENSMUST00000021921 Samd1D3YXK1 519 aa18.59■□□□□ 0.57
Ptch1-201ENSMUST00000021921 Brpf1B2RRD7 1212 aa18.58■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Ccar1Q8CH18 1146 aaKnown RBP18.57■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Drc7Q6V3W6 876 aa18.57■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Q3TQI7 289 aaKnown RBP18.56■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Fam71e1A1L3C1 212 aa18.55■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Sart3Q9JLI8 962 aaKnown RBP18.54■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Zfp777B9EKF4 885 aa18.54■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Cnksr2Q80YA9 1032 aa18.54■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Card11Q8CIS0 1159 aa18.54■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Tpm2P58774 284 aa18.53■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Stk26Q99JT2 416 aa18.53■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Ccer1Q9CQL2 403 aa18.53■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Gm21969J3QJZ1 289 aa18.52■□□□□ 0.56
Ptch1-201ENSMUST00000021921 Tmco5bQ80X59 307 aa18.51■□□□□ 0.55
Ptch1-201ENSMUST00000021921 Becn1O88597 448 aa18.51■□□□□ 0.55
Ptch1-201ENSMUST00000021921 Map7d2A2AG50 781 aa18.5■□□□□ 0.55
Ptch1-201ENSMUST00000021921 Ccdc27Q3V036 639 aa18.5■□□□□ 0.55
Ptch1-201ENSMUST00000021921 HdgfP51859 237 aaKnown RBP18.49■□□□□ 0.55
Ptch1-201ENSMUST00000021921 HnrnpuQ8VEK3 800 aaKnown RBP18.49■□□□□ 0.55
Ptch1-201ENSMUST00000021921 Rrp7aQ9D1C9 280 aaKnown RBP18.49■□□□□ 0.55
Ptch1-201ENSMUST00000021921 Wdr78E9PYY5 807 aa18.48■□□□□ 0.55
Ptch1-201ENSMUST00000021921 Ccdc47Q9D024 483 aaKnown RBP18.47■□□□□ 0.55
Ptch1-201ENSMUST00000021921 Dhx16G3X8X0 1044 aaKnown RBP18.46■□□□□ 0.55
Ptch1-201ENSMUST00000021921 Pak3Q61036 559 aa18.46■□□□□ 0.55
Ptch1-201ENSMUST00000021921 Znf330Q922H9 316 aa18.46■□□□□ 0.55
Ptch1-201ENSMUST00000021921 Rsph4aQ8BYM7 716 aa18.45■□□□□ 0.54
Ptch1-201ENSMUST00000021921 Gabpb2P81069 414 aa18.45■□□□□ 0.54
Ptch1-201ENSMUST00000021921 Arhgap27A2AB59 869 aa18.45■□□□□ 0.54
Ptch1-201ENSMUST00000021921 Rsph6aQ8CDR2 708 aa18.45■□□□□ 0.54
Ptch1-201ENSMUST00000021921 Pde3bQ61409 1100 aa18.44■□□□□ 0.54
Ptch1-201ENSMUST00000021921 Slc4a3P16283 1227 aa18.44■□□□□ 0.54
Ptch1-201ENSMUST00000021921 Pibf1E9Q6K3 756 aa18.43■□□□□ 0.54
Ptch1-201ENSMUST00000021921 A0A0U1RNP2 1173 aa18.43■□□□□ 0.54
Ptch1-201ENSMUST00000021921 Psme1P97371 249 aa18.43■□□□□ 0.54
Ptch1-201ENSMUST00000021921 Birc3O08863 600 aa18.42■□□□□ 0.54
Ptch1-201ENSMUST00000021921 Trim30aP15533 496 aa18.41■□□□□ 0.54
Ptch1-201ENSMUST00000021921 Tpm1P58771 284 aa18.4■□□□□ 0.54
Ptch1-201ENSMUST00000021921 Hs1bp3Q3TC93 395 aa18.4■□□□□ 0.54
Ptch1-201ENSMUST00000021921 GorabQ8BRM2 368 aa18.4■□□□□ 0.54
Ptch1-201ENSMUST00000021921 Sycp1Q62209 993 aa18.38■□□□□ 0.53
Ptch1-201ENSMUST00000021921 March6Q6ZQ89 909 aa18.38■□□□□ 0.53
Ptch1-201ENSMUST00000021921 AppP12023 770 aa18.36■□□□□ 0.53
Ptch1-201ENSMUST00000021921 Nap1l1P28656 391 aaKnown RBP18.36■□□□□ 0.53
Ptch1-201ENSMUST00000021921 Klf15Q9EPW2 415 aa18.36■□□□□ 0.53
Ptch1-201ENSMUST00000021921 PtmsQ9D0J8 101 aaKnown RBP18.35■□□□□ 0.53
Ptch1-201ENSMUST00000021921 Ipo4Q8VI75 1082 aa18.35■□□□□ 0.53
Ptch1-201ENSMUST00000021921 Spag9Q58A65 1321 aaKnown RBP18.34■□□□□ 0.53
Ptch1-201ENSMUST00000021921 Cluap1Q8R3P7 413 aa18.34■□□□□ 0.53
Ptch1-201ENSMUST00000021921 Smarce1O54941 411 aaKnown RBP18.33■□□□□ 0.52
Ptch1-201ENSMUST00000021921 Ccp110Q7TSH4 1004 aa18.33■□□□□ 0.52
Ptch1-201ENSMUST00000021921 Slc4a10Q5DTL9 1118 aa18.32■□□□□ 0.52
Ptch1-201ENSMUST00000021921 Mfap1aC0HKD8 439 aaKnown RBP18.32■□□□□ 0.52
Ptch1-201ENSMUST00000021921 Mfap1bC0HKD9 439 aaKnown RBP18.32■□□□□ 0.52
Ptch1-201ENSMUST00000021921 Rwdd1Q9CQK7 243 aa18.31■□□□□ 0.52
Ptch1-201ENSMUST00000021921 CalrP14211 416 aaKnown RBP18.31■□□□□ 0.52
Ptch1-201ENSMUST00000021921 Zrsr2Q62377 462 aaKnown RBP18.29■□□□□ 0.52
Ptch1-201ENSMUST00000021921 Rufy1Q8BIJ7 712 aa18.29■□□□□ 0.52
Ptch1-201ENSMUST00000021921 Ddx11Q6AXC6 880 aa18.28■□□□□ 0.52
Ptch1-201ENSMUST00000021921 MycnP03966 462 aaKnown RBP18.27■□□□□ 0.52
Ptch1-201ENSMUST00000021921 Bcl11bQ99PV8 884 aa18.27■□□□□ 0.52
Ptch1-201ENSMUST00000021921 Txndc2Q6P902 515 aa18.27■□□□□ 0.51
Ptch1-201ENSMUST00000021921 Commd10Q8JZY2 202 aa18.27■□□□□ 0.51
Ptch1-201ENSMUST00000021921 Mex3cQ05A36 652 aaKnown RBP18.27■□□□□ 0.51
Ptch1-201ENSMUST00000021921 Skida1Q80YR3 822 aa18.25■□□□□ 0.51
Ptch1-201ENSMUST00000021921 Speer4f1Q9D5Q6 258 aa18.24■□□□□ 0.51
Ptch1-201ENSMUST00000021921 Erich4Q3UNU4 136 aa18.24■□□□□ 0.51
Ptch1-201ENSMUST00000021921 SlkO54988 1233 aa18.23■□□□□ 0.51
Ptch1-201ENSMUST00000021921 Sf3a1Q8K4Z5 791 aaKnown RBP18.23■□□□□ 0.51
Ptch1-201ENSMUST00000021921 Sytl4Q9R0Q1 673 aa18.23■□□□□ 0.51
Ptch1-201ENSMUST00000021921 Themis2Q91YX0 663 aa18.23■□□□□ 0.51
Ptch1-201ENSMUST00000021921 Polr3gQ6NXY9 223 aa18.22■□□□□ 0.51
Ptch1-201ENSMUST00000021921 Irx3P81067 507 aa18.22■□□□□ 0.51
Ptch1-201ENSMUST00000021921 HmmrQ00547 794 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms