RNA–Protein interactions for RNA: ENSMUST00000002198.3

Sf3a1-201, Transcript of Splicing factor 3A subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3a1, Length 4,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1-201ENSMUST00000002198 Ccdc141E9Q8Q6 1531 aa19.19■□□□□ 0.66
Sf3a1-201ENSMUST00000002198 Rtl5Q5DTT4 599 aa19.17■□□□□ 0.66
Sf3a1-201ENSMUST00000002198 Pcf11G3X9Z4 1553 aa19.17■□□□□ 0.66
Sf3a1-201ENSMUST00000002198 Arid3cA6PWV5 409 aa19.16■□□□□ 0.66
Sf3a1-201ENSMUST00000002198 Myt1Q8CFC2 1127 aa19.16■□□□□ 0.66
Sf3a1-201ENSMUST00000002198 Ppp1r18Q8BQ30 594 aa19.15■□□□□ 0.66
Sf3a1-201ENSMUST00000002198 Anp32aO35381 247 aa19.14■□□□□ 0.65
Sf3a1-201ENSMUST00000002198 Ankrd26Q811D2 1581 aa19.13■□□□□ 0.65
Sf3a1-201ENSMUST00000002198 Rock2P70336 1388 aa19.13■□□□□ 0.65
Sf3a1-201ENSMUST00000002198 Prdm16A2A935 1275 aa19.12■□□□□ 0.65
Sf3a1-201ENSMUST00000002198 Gm14025A2AP89 1413 aa19.12■□□□□ 0.65
Sf3a1-201ENSMUST00000002198 Kdm2aP59997 1161 aa19.11■□□□□ 0.65
Sf3a1-201ENSMUST00000002198 Tdrd9Q14BI7 1383 aa19.11■□□□□ 0.65
Sf3a1-201ENSMUST00000002198 Stard8Q8K031 1019 aa19.09■□□□□ 0.65
Sf3a1-201ENSMUST00000002198 Il16O54824 1322 aa19.08■□□□□ 0.64
Sf3a1-201ENSMUST00000002198 Rundc1Q0VDN7 615 aa19.07■□□□□ 0.64
Sf3a1-201ENSMUST00000002198 Stk24Q99KH8 431 aa19.07■□□□□ 0.64
Sf3a1-201ENSMUST00000002198 Usp47Q8BY87 1376 aa19.05■□□□□ 0.64
Sf3a1-201ENSMUST00000002198 Spag9Q58A65 1321 aaKnown RBP19.05■□□□□ 0.64
Sf3a1-201ENSMUST00000002198 Nsd2Q8BVE8 1365 aa19.03■□□□□ 0.64
Sf3a1-201ENSMUST00000002198 Kif3bQ61771 747 aa19.03■□□□□ 0.64
Sf3a1-201ENSMUST00000002198 P3h3Q8CG70 732 aa19.02■□□□□ 0.64
Sf3a1-201ENSMUST00000002198 Mug1P28665 1476 aa19.02■□□□□ 0.64
Sf3a1-201ENSMUST00000002198 Arhgap5P97393 1501 aa19.01■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Plppr3Q7TPB0 716 aa19■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Calr4Q3TQS0 420 aa19■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Igf1rQ60751 1373 aa19■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Magi1Q6RHR9 1471 aa18.99■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Prdm10Q3UTQ7 1184 aa18.99■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Zfp777B9EKF4 885 aa18.99■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Aplp2Q06335 707 aa18.98■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Ifit1bl1D3Z6F0 470 aa18.98■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Rfx7F8VPJ6 1459 aa18.98■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Stag3O70576 1240 aa18.98■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Caskin1Q6P9K8 1431 aa18.98■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 NexmifQ5DTT1 1515 aa18.97■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Exosc9Q9JHI7 438 aaKnown RBP18.96■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Disp1Q3TDN0 1521 aa18.96■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Gtf2e1Q9D0D5 440 aa18.96■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Pbrm1Q8BSQ9 1634 aaKnown RBP18.96■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Mlh3A0A1Y7VMP7 1443 aa18.96■□□□□ 0.63
Sf3a1-201ENSMUST00000002198 Kif21aQ9QXL2 1672 aa18.95■□□□□ 0.62
Sf3a1-201ENSMUST00000002198 Samd9lQ69Z37 1561 aa18.95■□□□□ 0.62
Sf3a1-201ENSMUST00000002198 Naip2Q9QUK4 1447 aa18.94■□□□□ 0.62
Sf3a1-201ENSMUST00000002198 Erich3F6QRE9 1637 aa18.94■□□□□ 0.62
Sf3a1-201ENSMUST00000002198 Pla2r1Q62028 1487 aa18.93■□□□□ 0.62
Sf3a1-201ENSMUST00000002198 Gpatch8A2A6A1 1505 aa18.92■□□□□ 0.62
Sf3a1-201ENSMUST00000002198 Tmf1B9EKI3 1091 aa18.92■□□□□ 0.62
Sf3a1-201ENSMUST00000002198 Neo1P97798 1493 aa18.91■□□□□ 0.62
Sf3a1-201ENSMUST00000002198 Ofd1Q80Z25 1017 aa18.9■□□□□ 0.62
Sf3a1-201ENSMUST00000002198 Peg3Q3URU2 1571 aa18.9■□□□□ 0.62
Sf3a1-201ENSMUST00000002198 Slx4Q6P1D7 1565 aa18.89■□□□□ 0.61
Sf3a1-201ENSMUST00000002198 Dnajc5bQ9CQ94 199 aa18.89■□□□□ 0.61
Sf3a1-201ENSMUST00000002198 Srcin1Q9QWI6 1250 aa18.86■□□□□ 0.61
Sf3a1-201ENSMUST00000002198 Polr3glQ8R0C0 218 aa18.84■□□□□ 0.61
Sf3a1-201ENSMUST00000002198 Rad21Q61550 635 aaKnown RBP18.84■□□□□ 0.61
Sf3a1-201ENSMUST00000002198 Nup160Q9Z0W3 1402 aaKnown RBP18.83■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 Eif4g1Q6NZJ6 1600 aaKnown RBP18.82■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 A2mQ6GQT1 1474 aa18.82■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 WizO88286 1684 aaKnown RBP18.82■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 Sin3aQ60520 1274 aaKnown RBP18.81■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 Gm1043A0A140LJC2 1431 aa18.8■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 ErbinQ80TH2 1402 aa18.8■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 Dapk1Q80YE7 1442 aa18.8■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 Rapgef6Q5NCJ1 1609 aa18.8■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 Fancd2Q80V62 1450 aa18.8■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 Pde4cQ3UEI1 686 aa18.8■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 Abcc5Q9R1X5 1436 aa18.8■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 DroshaQ5HZJ0 1373 aaKnown RBP18.79■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 Cd109Q8R422 1442 aa18.78■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 Wdr43Q6ZQL4 677 aaKnown RBP18.77■□□□□ 0.6
Sf3a1-201ENSMUST00000002198 Csrnp3P59055 597 aa18.76■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 CenpjQ569L8 1344 aa18.75■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 Magi3Q9EQJ9 1476 aa18.75■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 Unc13aQ4KUS2 1712 aa18.75■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 Smg6P61406 1418 aaKnown RBP18.75■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 Mapk8ip3Q9ESN9 1337 aa18.75■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 Shroom2A2ALU4 1481 aa18.74■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 Zscan21Q07231 555 aa18.74■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 Iqcf3Q9D498 203 aa18.73■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 Myom3A2ABU4 1439 aa18.73■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 PxdnQ3UQ28 1475 aa18.72■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 Wwc2Q6NXJ0 1187 aa18.72■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 Mbd3Q9Z2D8 285 aaKnown RBP18.72■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 Exoc6Q8R313 802 aa18.71■□□□□ 0.59
Sf3a1-201ENSMUST00000002198 Ttll5Q8CHB8 1328 aa18.7■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 Abca5Q8K448 1642 aa18.69■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 Psme1P97371 249 aa18.69■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 Rusc2Q80U22 1514 aa18.68■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 BC005561E9Q5E2 1589 aa18.68■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 NudcO35685 332 aaKnown RBP18.68■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 Ncoa3O09000 1398 aa18.67■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 Ppp4r2Q0VGB7 417 aa18.67■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 Zfp644E9QA22 1323 aa18.67■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 Mak16Q8BGS0 296 aaKnown RBP18.66■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 Chmp4bQ9D8B3 224 aaKnown RBP18.66■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 MyclP10166 368 aa18.66■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 Map3k5O35099 1380 aa18.65■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 Atp10dQ8K2X1 1416 aa18.65■□□□□ 0.58
Sf3a1-201ENSMUST00000002198 Fan1Q69ZT1 1020 aa18.64■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 89.3 ms