RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR48, Length 113 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR48	snR48	IBD2	P53892	351 aa		0.57	□□□□□ -2.32
snR48	snR48	DIA1	P54005	336 aa		0.57	□□□□□ -2.32
snR48	snR48	PHO92	Q06390	306 aa		0.57	□□□□□ -2.32
snR48	snR48	YDL057W	Q07379	328 aa		0.57	□□□□□ -2.32
snR48	snR48	FRE2	P36033	711 aa		0.56	□□□□□ -2.32
snR48	snR48	STB6	P36085	766 aa		0.56	□□□□□ -2.32
snR48	snR48	MRPS9	P38120	278 aa		0.56	□□□□□ -2.32
snR48	snR48	PFS2	P42841	465 aa	Known RBP	0.56	□□□□□ -2.32
snR48	snR48	YJR154W	P47181	346 aa		0.56	□□□□□ -2.32
snR48	snR48	BRO1	P48582	844 aa		0.56	□□□□□ -2.32
snR48	snR48	YNR061C	P53747	219 aa		0.56	□□□□□ -2.32
snR48	snR48	HER2	Q03557	464 aa		0.56	□□□□□ -2.32
snR48	snR48	DPB4	Q04603	196 aa	Known RBP	0.56	□□□□□ -2.32
snR48	snR48	AIM32	Q04689	311 aa		0.56	□□□□□ -2.32
snR48	snR48	BRE1	Q07457	700 aa	Known RBP	0.56	□□□□□ -2.32
snR48	snR48	CUE5	Q08412	411 aa	Known RBP	0.56	□□□□□ -2.32
snR48	snR48	NUS1	Q12063	375 aa		0.56	□□□□□ -2.32
snR48	snR48	VCX1	Q99385	411 aa		0.56	□□□□□ -2.32
snR48	snR48	RAD52	P06778	471 aa	Known RBP	0.55	□□□□□ -2.32
snR48	snR48	APA1	P16550	321 aa	Known RBP	0.55	□□□□□ -2.32
snR48	snR48	GLC7	P32598	312 aa	Known RBP	0.55	□□□□□ -2.32
snR48	snR48	UTR4	P32626	227 aa		0.55	□□□□□ -2.32
snR48	snR48	ICS2	P38284	255 aa		0.55	□□□□□ -2.32
snR48	snR48	OST1	P41543	476 aa	Known RBP	0.55	□□□□□ -2.32
snR48	snR48	TAN1	P53072	289 aa	Predicted RBP	0.55	□□□□□ -2.32
snR48	snR48	FLC3	P53121	802 aa		0.55	□□□□□ -2.32
snR48	snR48	POP6	P53218	158 aa		0.55	□□□□□ -2.32
snR48	snR48	YGR126W	P53274	230 aa		0.55	□□□□□ -2.32
snR48	snR48	GPI1	P53306	609 aa		0.55	□□□□□ -2.32
snR48	snR48	MDG1	P53885	366 aa		0.55	□□□□□ -2.32
snR48	snR48	PSK2	Q08217	1101 aa		0.55	□□□□□ -2.32
snR48	snR48	YPL199C	Q08954	240 aa		0.55	□□□□□ -2.32
snR48	snR48	MPD2	Q99316	277 aa		0.55	□□□□□ -2.32
snR48	snR48	PSK1	P31374	1356 aa		0.55	□□□□□ -2.32
snR48	snR48	SUC2	P00724	532 aa		0.54	□□□□□ -2.32
snR48	snR48	NUC1	P08466	329 aa		0.54	□□□□□ -2.32
snR48	snR48	SAM1	P10659	382 aa	Known RBP	0.54	□□□□□ -2.32
snR48	snR48	SAM2	P19358	384 aa	Known RBP	0.54	□□□□□ -2.32
snR48	snR48	BUD5	P25300	642 aa	Predicted RBP	0.54	□□□□□ -2.32
snR48	snR48	NPL6	P32832	435 aa		0.54	□□□□□ -2.32
snR48	snR48	RPL32	P38061	130 aa	Known RBP	0.54	□□□□□ -2.32
snR48	snR48	GRX7	P38068	203 aa		0.54	□□□□□ -2.32
snR48	snR48	ARA1	P38115	344 aa		0.54	□□□□□ -2.32
snR48	snR48	PSD1	P39006	500 aa		0.54	□□□□□ -2.32
snR48	snR48	UTP18	P40362	594 aa	Predicted RBP	0.54	□□□□□ -2.32
snR48	snR48	GAB1	P41733	394 aa		0.54	□□□□□ -2.32
snR48	snR48	GCD10	P41814	478 aa		0.54	□□□□□ -2.32
snR48	snR48	ART5	P53244	586 aa	Known RBP	0.54	□□□□□ -2.32
snR48	snR48	MKC7	P53379	596 aa		0.54	□□□□□ -2.32
snR48	snR48	FOL1	P53848	824 aa		0.54	□□□□□ -2.32
snR48	snR48	CWC25	P53854	179 aa	Known RBP	0.54	□□□□□ -2.32
snR48	snR48	SKG3	Q06315	1026 aa		0.54	□□□□□ -2.32
snR48	snR48	PSR1	Q07800	427 aa		0.54	□□□□□ -2.32
snR48	snR48	YLR302C	O13544	120 aa		0.53	□□□□□ -2.32
snR48	snR48	SUI2	P20459	304 aa	Known RBP	0.53	□□□□□ -2.32
snR48	snR48	VMA16	P23968	213 aa		0.53	□□□□□ -2.32
snR48	snR48	IME2	P32581	645 aa		0.53	□□□□□ -2.32
snR48	snR48	MIX23	P38162	196 aa		0.53	□□□□□ -2.32
snR48	snR48	NPR3	P38742	1146 aa		0.53	□□□□□ -2.32
snR48	snR48	HIS6	P40545	261 aa		0.53	□□□□□ -2.32
snR48	snR48	RRT5	P43607	289 aa		0.53	□□□□□ -2.32
snR48	snR48	CRH1	P53301	507 aa		0.53	□□□□□ -2.32
snR48	snR48	CBK1	P53894	756 aa		0.53	□□□□□ -2.32
snR48	snR48	RTT109	Q07794	436 aa		0.53	□□□□□ -2.32
snR48	snR48	IRC25	Q07951	179 aa		0.53	□□□□□ -2.32
snR48	snR48	FDH1	Q08911	376 aa		0.53	□□□□□ -2.32
snR48	snR48	ADH7	P25377	361 aa		0.52	□□□□□ -2.33
snR48	snR48	BOS1	P25385	244 aa		0.52	□□□□□ -2.33
snR48	snR48	CRM1	P30822	1084 aa	Known RBP	0.52	□□□□□ -2.33
snR48	snR48	YKL133C	P36066	463 aa		0.52	□□□□□ -2.33
snR48	snR48	RIC1	P40395	1056 aa		0.52	□□□□□ -2.33
snR48	snR48	DFG10	P40526	253 aa		0.52	□□□□□ -2.33
snR48	snR48	DRN1	P53255	507 aa	Known RBP	0.52	□□□□□ -2.33
snR48	snR48	MSS18	P08593	268 aa		0.51	□□□□□ -2.33
snR48	snR48	NFT1	P0CE68	1218 aa		0.51	□□□□□ -2.33
snR48	snR48	GLK1	P17709	500 aa	Known RBP	0.51	□□□□□ -2.33
snR48	snR48	IES6	P32617	166 aa		0.51	□□□□□ -2.33
snR48	snR48	GRX4	P32642	244 aa		0.51	□□□□□ -2.33
snR48	snR48	YBL055C	P34220	418 aa	Predicted RBP	0.51	□□□□□ -2.33
snR48	snR48	RIB5	P38145	238 aa		0.51	□□□□□ -2.33
snR48	snR48	YHR210C	P38893	341 aa		0.51	□□□□□ -2.33
snR48	snR48	UME6	P39001	836 aa		0.51	□□□□□ -2.33
snR48	snR48	AIM10	P39965	576 aa	Known RBP	0.51	□□□□□ -2.33
snR48	snR48	YGR127W	P53275	312 aa		0.51	□□□□□ -2.33
snR48	snR48	INA17	Q02888	182 aa		0.51	□□□□□ -2.33
snR48	snR48	YKU80	Q04437	629 aa		0.51	□□□□□ -2.33
snR48	snR48	RBS1	Q05672	457 aa	Known RBP	0.51	□□□□□ -2.33
snR48	snR48	ETT1	Q08421	412 aa	Known RBP	0.51	□□□□□ -2.33
snR48	snR48	SSP2	Q08646	371 aa		0.51	□□□□□ -2.33
snR48	snR48	YOR365C	Q08844	703 aa		0.51	□□□□□ -2.33
snR48	snR48	NCE102	Q12207	173 aa	RIP-Chip data	0.51	□□□□□ -2.33	not detected
snR48	snR48	HSH49	Q99181	213 aa	Predicted RBP	0.51	□□□□□ -2.33
snR48	snR48	TRP1	P00912	224 aa		0.5	□□□□□ -2.33
snR48	snR48	MES1	P00958	751 aa	Known RBP	0.5	□□□□□ -2.33
snR48	snR48	MAS2	P11914	482 aa		0.5	□□□□□ -2.33
snR48	snR48	KGD1	P20967	1014 aa	Known RBP	0.5	□□□□□ -2.33
snR48	snR48	PWP1	P21304	576 aa	Known RBP	0.5	□□□□□ -2.33
snR48	snR48	SPS22	P25380	463 aa		0.5	□□□□□ -2.33
snR48	snR48	YCR100C	P25606	316 aa		0.5	□□□□□ -2.33
snR48	snR48	IMG1	P25626	169 aa		0.5	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms