RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W YHL012WP38709 493 aa5.39□□□□□ -1.55
PDH1YPR002W YEL028WP39989 153 aa5.39□□□□□ -1.55
PDH1YPR002W SNG1P46950 547 aa5.39□□□□□ -1.55
PDH1YPR002W MPS3P47069 682 aa5.39□□□□□ -1.55
PDH1YPR002W FAA4P47912 694 aaKnown RBP5.39□□□□□ -1.55
PDH1YPR002W YGR053CP53234 283 aa5.39□□□□□ -1.55
PDH1YPR002W GTR2P53290 341 aa5.39□□□□□ -1.55
PDH1YPR002W PRP38Q00723 242 aaPredicted RBP5.39□□□□□ -1.55
PDH1YPR002W RLI1Q03195 608 aaKnown RBP5.39□□□□□ -1.55
PDH1YPR002W TRS31Q03337 283 aa5.39□□□□□ -1.55
PDH1YPR002W ENT5Q03769 411 aaKnown RBP5.39□□□□□ -1.55
PDH1YPR002W TDA6Q06466 467 aa5.39□□□□□ -1.55
PDH1YPR002W RSB1Q08417 382 aa5.39□□□□□ -1.55
PDH1YPR002W SGO1Q08490 590 aa5.39□□□□□ -1.55
PDH1YPR002W APC5Q08683 685 aa5.39□□□□□ -1.55
PDH1YPR002W GPB1Q08886 897 aa5.39□□□□□ -1.55
PDH1YPR002W UBX3Q12229 455 aa5.39□□□□□ -1.55
PDH1YPR002W MED11Q99278 115 aa5.39□□□□□ -1.55
PDH1YPR002W HMG2P12684 1045 aa5.38□□□□□ -1.55
PDH1YPR002W TOP3P13099 656 aa5.38□□□□□ -1.55
PDH1YPR002W APE1P14904 514 aa5.38□□□□□ -1.55
PDH1YPR002W YAP1P19880 650 aaKnown RBP5.38□□□□□ -1.55
PDH1YPR002W CMK2P22517 447 aa5.38□□□□□ -1.55
PDH1YPR002W VPS3P23643 1011 aa5.38□□□□□ -1.55
PDH1YPR002W CAD1P24813 409 aaKnown RBP5.38□□□□□ -1.55
PDH1YPR002W EMC1P25574 760 aa5.38□□□□□ -1.55
PDH1YPR002W CIN8P27895 1000 aa5.38□□□□□ -1.55
PDH1YPR002W NUP2P32499 720 aa5.38□□□□□ -1.55
PDH1YPR002W YKL100CP34248 587 aa5.38□□□□□ -1.55
PDH1YPR002W RFS1P38234 210 aaKnown RBP5.38□□□□□ -1.55
PDH1YPR002W SFB3P38810 929 aa5.38□□□□□ -1.55
PDH1YPR002W YHR131CP38835 850 aa5.38□□□□□ -1.55
PDH1YPR002W YAP1801P38856 637 aa5.38□□□□□ -1.55
PDH1YPR002W SWD1P39706 426 aa5.38□□□□□ -1.55
PDH1YPR002W GDH3P39708 457 aa5.38□□□□□ -1.55
PDH1YPR002W HAT2P39984 401 aa5.38□□□□□ -1.55
PDH1YPR002W PEA2P40091 420 aa5.38□□□□□ -1.55
PDH1YPR002W MET18P40469 1032 aa5.38□□□□□ -1.55
PDH1YPR002W PTR3P43606 678 aa5.38□□□□□ -1.55
PDH1YPR002W NAS6P50086 228 aa5.38□□□□□ -1.55
PDH1YPR002W SPP2Q02521 185 aa5.38□□□□□ -1.55
PDH1YPR002W SWP1Q02795 286 aa5.38□□□□□ -1.55
PDH1YPR002W YML131WQ03102 365 aa5.38□□□□□ -1.55
PDH1YPR002W MMT1Q03218 510 aa5.38□□□□□ -1.55
PDH1YPR002W TLG1Q03322 224 aa5.38□□□□□ -1.55
PDH1YPR002W MSC2Q03455 724 aa5.38□□□□□ -1.55
PDH1YPR002W RRP17Q04031 235 aaPredicted RBP5.38□□□□□ -1.55
PDH1YPR002W TIF35Q04067 274 aaKnown RBP5.38□□□□□ -1.55
PDH1YPR002W HRD3Q05787 833 aa5.38□□□□□ -1.55
PDH1YPR002W DTD1Q07648 150 aaKnown RBP5.38□□□□□ -1.55
PDH1YPR002W BRE4Q07660 1125 aa5.38□□□□□ -1.55
PDH1YPR002W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
PDH1YPR002W AVO1Q08236 1176 aa5.38□□□□□ -1.55
PDH1YPR002W SGT1Q08446 395 aa5.38□□□□□ -1.55
PDH1YPR002W DDC1Q08949 612 aa5.38□□□□□ -1.55
PDH1YPR002W NBP2Q12163 236 aa5.38□□□□□ -1.55
PDH1YPR002W PFK27Q12471 397 aaPredicted RBP5.38□□□□□ -1.55
PDH1YPR002W YPL119C-AQ3E751 87 aa5.38□□□□□ -1.55
PDH1YPR002W YOL159C-AQ3E769 90 aa5.38□□□□□ -1.55
PDH1YPR002W MRP13P12686 339 aa5.38□□□□□ -1.55
PDH1YPR002W ACO1P19414 778 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
PDH1YPR002W YCK2P23292 546 aaKnown RBP5.38□□□□□ -1.55
PDH1YPR002W AAT2P23542 418 aaKnown RBP5.38□□□□□ -1.55
PDH1YPR002W UBC8P28263 218 aa5.38□□□□□ -1.55
PDH1YPR002W BEM1P29366 551 aa5.38□□□□□ -1.55
PDH1YPR002W MSS51P32335 436 aa5.38□□□□□ -1.55
PDH1YPR002W SFA1P32771 386 aa5.38□□□□□ -1.55
PDH1YPR002W PTM1P32857 523 aa5.38□□□□□ -1.55
PDH1YPR002W GDH2P33327 1092 aaKnown RBP5.38□□□□□ -1.55
PDH1YPR002W TOM20P35180 183 aa5.38□□□□□ -1.55
PDH1YPR002W CAF4P36130 643 aa5.38□□□□□ -1.55
PDH1YPR002W STB5P38699 743 aa5.38□□□□□ -1.55
PDH1YPR002W EDC3P39998 551 aaKnown RBP5.38□□□□□ -1.55
PDH1YPR002W THO1P40040 218 aaKnown RBP5.38□□□□□ -1.55
PDH1YPR002W GCD14P46959 383 aaPredicted RBP5.38□□□□□ -1.55
PDH1YPR002W NNF1P47149 201 aa5.38□□□□□ -1.55
PDH1YPR002W RRT6P53117 311 aaPredicted RBP5.38□□□□□ -1.55
PDH1YPR002W IBD2P53892 351 aa5.38□□□□□ -1.55
PDH1YPR002W RAD33Q04231 177 aa5.38□□□□□ -1.55
PDH1YPR002W TRM12Q04235 462 aa5.38□□□□□ -1.55
PDH1YPR002W SPO20Q04359 397 aa5.38□□□□□ -1.55
PDH1YPR002W PEX12Q04370 399 aa5.38□□□□□ -1.55
PDH1YPR002W BLS1Q06071 122 aa5.38□□□□□ -1.55
PDH1YPR002W GPI11Q06636 219 aa5.38□□□□□ -1.55
PDH1YPR002W SWC7Q06707 132 aa5.38□□□□□ -1.55
PDH1YPR002W UAF30Q08747 228 aa5.38□□□□□ -1.55
PDH1YPR002W RSA1Q08932 381 aa5.38□□□□□ -1.55
PDH1YPR002W ALG6Q12001 544 aaKnown RBP5.38□□□□□ -1.55
PDH1YPR002W HUA2Q12134 243 aa5.38□□□□□ -1.55
PDH1YPR002W SCM3Q12334 223 aa5.38□□□□□ -1.55
PDH1YPR002W JLP1Q12358 412 aa5.38□□□□□ -1.55
PDH1YPR002W TY1A-NL1Q12391 440 aaKnown RBP5.38□□□□□ -1.55
PDH1YPR002W BRR1Q99177 341 aaPredicted RBP5.38□□□□□ -1.55
PDH1YPR002W THP2O13539 261 aaKnown RBP5.37□□□□□ -1.55
PDH1YPR002W RPN13O13563 156 aa5.37□□□□□ -1.55
PDH1YPR002W ARG3P05150 338 aa5.37□□□□□ -1.55
PDH1YPR002W RPS4AP0CX35 261 aaKnown RBP5.37□□□□□ -1.55
PDH1YPR002W RPS4BP0CX36 261 aaKnown RBP5.37□□□□□ -1.55
PDH1YPR002W CLB3P24870 427 aa5.37□□□□□ -1.55
PDH1YPR002W YIH1P25637 258 aa5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms