RNA–Protein interactions for RNA: YMR106C

YKU80, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeastyeast

Gene YKU80, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKU80YMR106C IBA57P47158 497 aa2.48□□□□□ -2.01
YKU80YMR106C GTO1P48239 356 aa2.48□□□□□ -2.01
YKU80YMR106C PNC1P53184 216 aaKnown RBP2.48□□□□□ -2.01
YKU80YMR106C YGR042WP53227 271 aa2.48□□□□□ -2.01
YKU80YMR106C SLI1P53304 468 aa2.48□□□□□ -2.01
YKU80YMR106C MAL12P53341 584 aa2.48□□□□□ -2.01
YKU80YMR106C RRN9P53437 365 aa2.48□□□□□ -2.01
YKU80YMR106C CUS2P53830 285 aaPredicted RBP2.48□□□□□ -2.01
YKU80YMR106C AQR1P53943 586 aa2.48□□□□□ -2.01
YKU80YMR106C USA1Q03714 838 aa2.48□□□□□ -2.01
YKU80YMR106C BNA7Q04066 261 aa2.48□□□□□ -2.01
YKU80YMR106C SKG3Q06315 1026 aa2.48□□□□□ -2.01
YKU80YMR106C OMS1Q06668 471 aa2.48□□□□□ -2.01
YKU80YMR106C SYO1Q07395 620 aa2.48□□□□□ -2.01
YKU80YMR106C THI3Q07471 609 aa2.48□□□□□ -2.01
YKU80YMR106C HFI1Q12060 488 aa2.48□□□□□ -2.01
YKU80YMR106C YOL107WQ12239 342 aa2.48□□□□□ -2.01
YKU80YMR106C INP53Q12271 1107 aa2.48□□□□□ -2.01
YKU80YMR106C CTF3Q12748 733 aa2.48□□□□□ -2.01
YKU80YMR106C NBL1Q3E7Y6 73 aa2.48□□□□□ -2.01
YKU80YMR106C VPS63O13549 108 aa2.48□□□□□ -2.01
YKU80YMR106C SIR3P06701 978 aa2.48□□□□□ -2.01
YKU80YMR106C RPS24AP0CX31 135 aaKnown RBP2.48□□□□□ -2.01
YKU80YMR106C RPS24BP0CX32 135 aaKnown RBP2.48□□□□□ -2.01
YKU80YMR106C BET2P20133 325 aa2.48□□□□□ -2.01
YKU80YMR106C PRE10P21242 288 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
YKU80YMR106C PHO3P24031 467 aa2.48□□□□□ -2.01
YKU80YMR106C AFG1P32317 509 aa2.48□□□□□ -2.01
YKU80YMR106C LOS1P33418 1100 aaPredicted RBP2.48□□□□□ -2.01
YKU80YMR106C PTK1P36002 662 aaPredicted RBP2.48□□□□□ -2.01
YKU80YMR106C DBP7P36120 742 aaKnown RBP2.48□□□□□ -2.01
YKU80YMR106C HMT1P38074 348 aa2.48□□□□□ -2.01
YKU80YMR106C CDS1P38221 457 aa2.48□□□□□ -2.01
YKU80YMR106C FES1P38260 290 aa2.48□□□□□ -2.01
YKU80YMR106C YBR242WP38331 238 aa2.48□□□□□ -2.01
YKU80YMR106C TDA3P38758 523 aa2.48□□□□□ -2.01
YKU80YMR106C RPN10P38886 268 aaKnown RBP2.48□□□□□ -2.01
YKU80YMR106C FRT2P39734 528 aa2.48□□□□□ -2.01
YKU80YMR106C YEL057CP39983 233 aa2.48□□□□□ -2.01
YKU80YMR106C FMC1P40491 155 aa2.48□□□□□ -2.01
YKU80YMR106C UTP25P40498 721 aaKnown RBP2.48□□□□□ -2.01
YKU80YMR106C PRM2P40534 656 aa2.48□□□□□ -2.01
YKU80YMR106C GAB1P41733 394 aa2.48□□□□□ -2.01
YKU80YMR106C SHR5P41912 237 aa2.48□□□□□ -2.01
YKU80YMR106C YJR056CP47115 236 aa2.48□□□□□ -2.01
YKU80YMR106C PSP1P50896 841 aaKnown RBP2.48□□□□□ -2.01
YKU80YMR106C MND1P53102 219 aa2.48□□□□□ -2.01
YKU80YMR106C LIF1P53150 421 aa2.48□□□□□ -2.01
YKU80YMR106C DRN1P53255 507 aaKnown RBP2.48□□□□□ -2.01
YKU80YMR106C YGR111WP53265 400 aa2.48□□□□□ -2.01
YKU80YMR106C VAC7P53950 1165 aa2.48□□□□□ -2.01
YKU80YMR106C HEF3P53978 1044 aaKnown RBP2.48□□□□□ -2.01
YKU80YMR106C ROY1Q04847 553 aa2.48□□□□□ -2.01
YKU80YMR106C YLR224WQ05947 369 aa2.48□□□□□ -2.01
YKU80YMR106C THI7Q05998 598 aa2.48□□□□□ -2.01
YKU80YMR106C ATG23Q06671 453 aa2.48□□□□□ -2.01
YKU80YMR106C VAM6Q07468 1049 aa2.48□□□□□ -2.01
YKU80YMR106C RPN8Q08723 338 aaKnown RBP2.48□□□□□ -2.01
YKU80YMR106C RCN2Q12044 265 aa2.48□□□□□ -2.01
YKU80YMR106C CWC2Q12046 339 aaPredicted RBP2.48□□□□□ -2.01
YKU80YMR106C DAS2Q12084 232 aa2.48□□□□□ -2.01
YKU80YMR106C TFB5Q3E7C1 72 aaPredicted RBP2.48□□□□□ -2.01
YKU80YMR106C DIF1O13577 133 aa2.47□□□□□ -2.01
YKU80YMR106C PHO5P00635 467 aa2.47□□□□□ -2.01
YKU80YMR106C PRC1P00729 532 aa2.47□□□□□ -2.01
YKU80YMR106C TUB2P02557 457 aaKnown RBP2.47□□□□□ -2.01
YKU80YMR106C ARG4P04076 463 aaPredicted RBP2.47□□□□□ -2.01
YKU80YMR106C LPD1P09624 499 aaKnown RBP2.47□□□□□ -2.01
YKU80YMR106C PCK1P10963 549 aa2.47□□□□□ -2.01
YKU80YMR106C GLN4P13188 809 aaKnown RBP2.47□□□□□ -2.01
YKU80YMR106C KGD2P19262 463 aaPredicted RBP2.47□□□□□ -2.01
YKU80YMR106C ATP12P22135 325 aa2.47□□□□□ -2.01
YKU80YMR106C YCL068CP25593 260 aa2.47□□□□□ -2.01
YKU80YMR106C IMG1P25626 169 aa2.47□□□□□ -2.01
YKU80YMR106C YCR061WP25639 631 aa2.47□□□□□ -2.01
YKU80YMR106C ADE1P27616 306 aa2.47□□□□□ -2.01
YKU80YMR106C HOG1P32485 435 aa2.47□□□□□ -2.01
YKU80YMR106C RPD3P32561 433 aa2.47□□□□□ -2.01
YKU80YMR106C OAF3P36023 863 aa2.47□□□□□ -2.01
YKU80YMR106C SRP102P36057 244 aaPredicted RBP2.47□□□□□ -2.01
YKU80YMR106C ALY1P36117 915 aa2.47□□□□□ -2.01
YKU80YMR106C GEX2P36173 615 aa2.47□□□□□ -2.01
YKU80YMR106C RFT1P38206 574 aaPredicted RBP2.47□□□□□ -2.01
YKU80YMR106C SET5P38890 526 aaKnown RBP2.47□□□□□ -2.01
YKU80YMR106C SEC72P39742 193 aaKnown RBP2.47□□□□□ -2.01
YKU80YMR106C AFG3P39925 761 aa2.47□□□□□ -2.01
YKU80YMR106C JHD1P40034 492 aa2.47□□□□□ -2.01
YKU80YMR106C SOK1P40317 901 aa2.47□□□□□ -2.01
YKU80YMR106C RFC4P40339 323 aaKnown RBP2.47□□□□□ -2.01
YKU80YMR106C ATM1P40416 690 aa2.47□□□□□ -2.01
YKU80YMR106C RTS2P40962 232 aa2.47□□□□□ -2.01
YKU80YMR106C TFG2P41896 400 aaPredicted RBP2.47□□□□□ -2.01
YKU80YMR106C QRI1P43123 477 aaKnown RBP2.47□□□□□ -2.01
YKU80YMR106C CAK1P43568 368 aaPredicted RBP2.47□□□□□ -2.01
YKU80YMR106C PEF1P53238 335 aa2.47□□□□□ -2.01
YKU80YMR106C RCF2P53721 224 aa2.47□□□□□ -2.01
YKU80YMR106C YNL143CP53908 130 aa2.47□□□□□ -2.01
YKU80YMR106C ADE16P54113 591 aaKnown RBP2.47□□□□□ -2.01
YKU80YMR106C YSA1Q01976 231 aa2.47□□□□□ -2.01
YKU80YMR106C YDC1Q02896 317 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 105.5 ms