RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	SWC7	Q06707	132 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	VAM6	Q07468	1049 aa		4.6	□□□□□ -1.67
PAN1	YIR006C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
PAN1	YIR006C	LEU1	P07264	779 aa	Known RBP	4.59	□□□□□ -1.67
PAN1	YIR006C	VPS33	P20795	691 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	ATG22	P25568	528 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	FUN30	P31380	1131 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	AEP1	P32493	518 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	TIM23	P32897	222 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	VPS51	P36116	164 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	RPF2	P36160	344 aa	Known RBP	4.59	□□□□□ -1.67
PAN1	YIR006C	APM3	P38153	483 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	SIF2	P38262	535 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	ATG12	P38316	186 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	AIM18	P38884	321 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	SWD1	P39706	426 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	DDI1	P40087	428 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	STB1	P42845	420 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	YPT32	P51996	222 aa	Known RBP	4.59	□□□□□ -1.67
PAN1	YIR006C	NMA2	P53204	395 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	IRC15	Q02733	499 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	RRN5	Q02983	363 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	YOR238W	Q08634	303 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	HAL9	Q12180	1030 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	ERP3	Q12403	225 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	GIS3	Q12418	502 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	HTZ1	Q12692	134 aa	Known RBP	4.59	□□□□□ -1.67
PAN1	YIR006C	COR1	P07256	457 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	PHO4	P07270	312 aa	Known RBP	4.59	□□□□□ -1.67
PAN1	YIR006C	PPH22	P23595	377 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	DMC1	P25453	334 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	CIN8	P27895	1000 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	RME1	P32338	300 aa	Known RBP	4.59	□□□□□ -1.67
PAN1	YIR006C	ARP2	P32381	391 aa	Known RBP	4.59	□□□□□ -1.67
PAN1	YIR006C	PHO90	P39535	881 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	YAT2	P40017	923 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	SER2	P42941	309 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	OCA1	P50946	238 aa	Predicted RBP	4.59	□□□□□ -1.67
PAN1	YIR006C	MNP1	P53163	194 aa	Predicted RBP	4.59	□□□□□ -1.67
PAN1	YIR006C	YML131W	Q03102	365 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	YMD8	Q03697	442 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	BSC2	Q05611	235 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	YDR278C	Q05612	105 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	YOL131W	Q08270	108 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	YDL199C	Q12407	687 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	YOL159C-A	Q3E769	90 aa		4.59	□□□□□ -1.67
PAN1	YIR006C	GAL80	P04387	435 aa		4.59	□□□□□ -1.68
PAN1	YIR006C	ATP1	P07251	545 aa	Known RBP	4.59	□□□□□ -1.68
PAN1	YIR006C	SLX5	P32828	619 aa	Known RBP	4.59	□□□□□ -1.68
PAN1	YIR006C	LRG1	P35688	1017 aa		4.59	□□□□□ -1.68
PAN1	YIR006C	YBR056W	P38081	501 aa		4.59	□□□□□ -1.68
PAN1	YIR006C	RIM2	P38127	377 aa		4.59	□□□□□ -1.68
PAN1	YIR006C	DSS1	P39112	969 aa		4.59	□□□□□ -1.68
PAN1	YIR006C	GIP4	P39732	760 aa		4.59	□□□□□ -1.68
PAN1	YIR006C	ARG5,6	Q01217	863 aa		4.59	□□□□□ -1.68
PAN1	YIR006C	MUK1	Q02866	612 aa		4.59	□□□□□ -1.68
PAN1	YIR006C	CCE1	Q03702	353 aa		4.59	□□□□□ -1.68
PAN1	YIR006C	MDM32	Q12171	622 aa		4.59	□□□□□ -1.68
PAN1	YIR006C	BI2	P03873	423 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	PET122	P10355	254 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	RAM1	P22007	431 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	UTR2	P32623	467 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	PDR3	P33200	976 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	BMT2	P38278	337 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	ARP1	P38696	384 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	SDP1	P40479	209 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	YFL012W	P43580	148 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	KXD1	P53158	218 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	RTS3	P53289	263 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	YML108W	Q03759	105 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	RCL1	Q08096	367 aa	Predicted RBP	4.58	□□□□□ -1.68
PAN1	YIR006C	RTR2	Q12378	196 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	BI3	Q9ZZW7	517 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	PHO81	P17442	1178 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	YSC84	P32793	468 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	DUR3	P33413	735 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	ARA1	P38115	344 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	CTR1	P49573	406 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	TWF1	P53250	332 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	ERV25	P54837	211 aa	Known RBP	4.58	□□□□□ -1.68
PAN1	YIR006C	MRPL13	Q02204	264 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	TRM10	Q12400	293 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	CSR2	Q12734	1121 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	TOP3	P13099	656 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	AAT2	P23542	418 aa	Known RBP	4.58	□□□□□ -1.68
PAN1	YIR006C	HYM1	P32464	399 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	SEO1	P39709	593 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	MAF1	P41910	395 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	RET2	P43621	546 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	YPL071C	Q02864	156 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	YML020W	Q03722	664 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	FMN1	Q03778	218 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	YDR514C	Q04408	483 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	RRP9	Q06506	573 aa	Known RBP	4.58	□□□□□ -1.68
PAN1	YIR006C	BBP1	Q12365	385 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	Q0010	Q9ZZX9	128 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	HTA1	P04911	132 aa	Known RBP	4.58	□□□□□ -1.68
PAN1	YIR006C	HTA2	P04912	132 aa		4.58	□□□□□ -1.68
PAN1	YIR006C	ADE5,7	P07244	802 aa	Known RBP	4.58	□□□□□ -1.68
PAN1	YIR006C	CHS1	P08004	1131 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms