RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W PUT3P25502 979 aaPredicted RBP3.91□□□□□ -1.78
SEC28YIL076W MKT1P40850 830 aaKnown RBP3.91□□□□□ -1.78
SEC28YIL076W YMR018WQ04364 514 aa3.91□□□□□ -1.78
SEC28YIL076W HSH49Q99181 213 aaPredicted RBP3.91□□□□□ -1.78
SEC28YIL076W TIF3P34167 436 aaKnown RBP3.9□□□□□ -1.79
SEC28YIL076W SHE10P53075 577 aa3.9□□□□□ -1.79
SEC28YIL076W YKU80Q04437 629 aa3.9□□□□□ -1.79
SEC28YIL076W LSP1Q12230 341 aaKnown RBP3.9□□□□□ -1.79
SEC28YIL076W YBR126W-AQ8TGU7 68 aa3.9□□□□□ -1.79
SEC28YIL076W SUC2P00724 532 aa3.89□□□□□ -1.79
SEC28YIL076W PMR1P13586 950 aa3.89□□□□□ -1.79
SEC28YIL076W ART10P18634 518 aaKnown RBP3.89□□□□□ -1.79
SEC28YIL076W TRX2P22803 104 aaKnown RBP3.89□□□□□ -1.79
SEC28YIL076W CCT6P39079 546 aa3.89□□□□□ -1.79
SEC28YIL076W HAT2P39984 401 aa3.89□□□□□ -1.79
SEC28YIL076W MSO1P53604 210 aaKnown RBP3.89□□□□□ -1.79
SEC28YIL076W IRC15Q02733 499 aa3.89□□□□□ -1.79
SEC28YIL076W COQ9Q05779 260 aa3.89□□□□□ -1.79
SEC28YIL076W PHO92Q06390 306 aa3.89□□□□□ -1.79
SEC28YIL076W CTF3Q12748 733 aa3.89□□□□□ -1.79
SEC28YIL076W CDC16P09798 840 aa3.88□□□□□ -1.79
SEC28YIL076W RNA14P25298 677 aaKnown RBP3.88□□□□□ -1.79
SEC28YIL076W UTR4P32626 227 aa3.88□□□□□ -1.79
SEC28YIL076W MRPL4P36517 319 aa3.88□□□□□ -1.79
SEC28YIL076W DED81P38707 554 aaKnown RBP3.88□□□□□ -1.79
SEC28YIL076W YEL068CP39977 110 aa3.88□□□□□ -1.79
SEC28YIL076W YGL242CP53066 181 aa3.88□□□□□ -1.79
SEC28YIL076W DUO1P53168 247 aaKnown RBP3.88□□□□□ -1.79
SEC28YIL076W RTS3P53289 263 aa3.88□□□□□ -1.79
SEC28YIL076W IPI3P53877 555 aa3.88□□□□□ -1.79
SEC28YIL076W NGL3Q03210 505 aa3.88□□□□□ -1.79
SEC28YIL076W VPS74Q06385 345 aa3.88□□□□□ -1.79
SEC28YIL076W THP1Q08231 455 aa3.88□□□□□ -1.79
SEC28YIL076W HNT3Q08702 217 aa3.88□□□□□ -1.79
SEC28YIL076W EST1P17214 699 aaPredicted RBP3.87□□□□□ -1.79
SEC28YIL076W LDB16P25587 256 aa3.87□□□□□ -1.79
SEC28YIL076W TIF4631P39935 952 aaKnown RBP3.87□□□□□ -1.79
SEC28YIL076W OPY2Q06810 360 aa3.87□□□□□ -1.79
SEC28YIL076W NOP58Q12499 511 aaKnown RBP3.87□□□□□ -1.79
SEC28YIL076W FUN19P28003 413 aaPredicted RBP3.86□□□□□ -1.79
SEC28YIL076W SHP1P34223 423 aa3.86□□□□□ -1.79
SEC28YIL076W MUD2P36084 527 aaKnown RBP3.86□□□□□ -1.79
SEC28YIL076W BNA4P38169 460 aa3.86□□□□□ -1.79
SEC28YIL076W ALK1P43633 760 aaKnown RBP3.86□□□□□ -1.79
SEC28YIL076W GWT1P47026 490 aa3.86□□□□□ -1.79
SEC28YIL076W TOF2Q02208 771 aa3.86□□□□□ -1.79
SEC28YIL076W ADD37Q03233 198 aa3.86□□□□□ -1.79
SEC28YIL076W HUA2Q12134 243 aa3.86□□□□□ -1.79
SEC28YIL076W YER078W-AQ3E7A2 54 aa3.86□□□□□ -1.79
SEC28YIL076W EXO70P19658 623 aa3.85□□□□□ -1.79
SEC28YIL076W ELO2P25358 347 aa3.85□□□□□ -1.79
SEC28YIL076W MCM10P32354 571 aa3.85□□□□□ -1.79
SEC28YIL076W MSN2P33748 704 aa3.85□□□□□ -1.79
SEC28YIL076W SEF1P34228 1148 aa3.85□□□□□ -1.79
SEC28YIL076W ALG5P40350 334 aa3.85□□□□□ -1.79
SEC28YIL076W AIM22P47051 409 aa3.85□□□□□ -1.79
SEC28YIL076W GPI1P53306 609 aa3.85□□□□□ -1.79
SEC28YIL076W CFT2Q12102 859 aaPredicted RBP3.85□□□□□ -1.79
SEC28YIL076W CPR1P14832 162 aaKnown RBP3.84□□□□□ -1.79
SEC28YIL076W SSH4P32343 579 aa3.84□□□□□ -1.79
SEC28YIL076W DUG2P38149 878 aa3.84□□□□□ -1.79
SEC28YIL076W TCM62P38228 572 aaKnown RBP3.84□□□□□ -1.79
SEC28YIL076W ELP2P42935 788 aa3.84□□□□□ -1.79
SEC28YIL076W IMD4P50094 524 aaKnown RBP3.84□□□□□ -1.79
SEC28YIL076W RBS1Q05672 457 aaKnown RBP3.84□□□□□ -1.79
SEC28YIL076W YPT6Q99260 215 aa3.84□□□□□ -1.79
SEC28YIL076W RFS1P38234 210 aaKnown RBP3.83□□□□□ -1.8
SEC28YIL076W VID30P53076 958 aa3.83□□□□□ -1.8
SEC28YIL076W RPC11Q04307 110 aaPredicted RBP3.83□□□□□ -1.8
SEC28YIL076W YEH1Q07804 573 aa3.83□□□□□ -1.8
SEC28YIL076W YOR387CQ08910 206 aa3.83□□□□□ -1.8
SEC28YIL076W LPD1P09624 499 aaKnown RBP3.82□□□□□ -1.8
SEC28YIL076W HEF3P53978 1044 aaKnown RBP3.82□□□□□ -1.8
SEC28YIL076W NMD4Q12129 218 aa3.82□□□□□ -1.8
SEC28YIL076W RKM5Q12367 367 aa3.82□□□□□ -1.8
SEC28YIL076W MES1P00958 751 aaKnown RBP3.81□□□□□ -1.8
SEC28YIL076W DPB3P27344 201 aa3.81□□□□□ -1.8
SEC28YIL076W MSR1P38714 643 aa3.81□□□□□ -1.8
SEC28YIL076W FLC2P39719 783 aa3.81□□□□□ -1.8
SEC28YIL076W RBG2P53295 368 aaKnown RBP3.81□□□□□ -1.8
SEC28YIL076W ZPR1P53303 486 aaKnown RBP3.81□□□□□ -1.8
SEC28YIL076W RLM1Q12224 676 aa3.81□□□□□ -1.8
SEC28YIL076W GLK1P17709 500 aaKnown RBP3.8□□□□□ -1.8
SEC28YIL076W PAP1P29468 568 aaKnown RBP3.8□□□□□ -1.8
SEC28YIL076W PAH1P32567 862 aa3.8□□□□□ -1.8
SEC28YIL076W MRP4P32902 394 aa3.8□□□□□ -1.8
SEC28YIL076W FAA2P39518 744 aa3.8□□□□□ -1.8
SEC28YIL076W FAU1P40099 211 aa3.8□□□□□ -1.8
SEC28YIL076W YIL067CP40514 678 aa3.8□□□□□ -1.8
SEC28YIL076W SGN1P40561 250 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SEC28YIL076W PIR3Q03180 325 aa3.8□□□□□ -1.8
SEC28YIL076W RRP12Q12754 1228 aaKnown RBP3.8□□□□□ -1.8
SEC28YIL076W SPT15P13393 240 aaKnown RBP3.79□□□□□ -1.8
SEC28YIL076W NAM9P27929 486 aa3.79□□□□□ -1.8
SEC28YIL076W DEG1P31115 442 aaKnown RBP3.79□□□□□ -1.8
SEC28YIL076W TCD2P36101 447 aaKnown RBP3.79□□□□□ -1.8
SEC28YIL076W NDT80P38830 627 aa3.79□□□□□ -1.8
SEC28YIL076W PRE5P40302 234 aaKnown RBP3.79□□□□□ -1.8
SEC28YIL076W ARK1P53974 638 aa3.79□□□□□ -1.8
SEC28YIL076W HEL2Q05580 639 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms