RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	SHR3	Q02774	210 aa		5.05	□□□□□ -1.6
SKI8	YGL213C	HOT1	Q03213	719 aa		5.05	□□□□□ -1.6
SKI8	YGL213C	DCI1	Q08558	271 aa		5.05	□□□□□ -1.6
SKI8	YGL213C	EDE1	P34216	1381 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	BNR1	P40450	1375 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	RHO2	P06781	192 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	CBP1	P07252	654 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	PEP4	P07267	405 aa	Known RBP	5.04	□□□□□ -1.6
SKI8	YGL213C	YMR085W	P0CF18	432 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	YIM1	P28625	365 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	ANP1	P32629	500 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	BNA4	P38169	460 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	SLM4	P38247	162 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	YHR054C	P38780	354 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	EFM4	P40516	257 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	VMA13	P41807	478 aa	Known RBP	5.04	□□□□□ -1.6
SKI8	YGL213C	COS5	P47187	383 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	SKO1	Q02100	647 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	HEL2	Q05580	639 aa	Known RBP	5.04	□□□□□ -1.6
SKI8	YGL213C	COS7	Q07788	383 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	CFT2	Q12102	859 aa	Predicted RBP	5.04	□□□□□ -1.6
SKI8	YGL213C	NCE102	Q12207	173 aa	RIP-Chip data	5.04	□□□□□ -1.6	not detected
SKI8	YGL213C	FRE7	Q12333	620 aa		5.04	□□□□□ -1.6
SKI8	YGL213C	GAL4	P04386	881 aa		5.03	□□□□□ -1.6
SKI8	YGL213C	SNT1	P25357	1226 aa		5.03	□□□□□ -1.6
SKI8	YGL213C	RRP7	P25368	297 aa	Predicted RBP	5.03	□□□□□ -1.6
SKI8	YGL213C	FLO10	P36170	1169 aa		5.03	□□□□□ -1.6
SKI8	YGL213C	THI2	P38141	450 aa		5.03	□□□□□ -1.6
SKI8	YGL213C	LAG1	P38703	411 aa		5.03	□□□□□ -1.6
SKI8	YGL213C	YHR210C	P38893	341 aa		5.03	□□□□□ -1.6
SKI8	YGL213C	HXT9	P40885	567 aa		5.03	□□□□□ -1.6
SKI8	YGL213C	BTN2	P53286	410 aa		5.03	□□□□□ -1.6
SKI8	YGL213C	ZPR1	P53303	486 aa	Known RBP	5.03	□□□□□ -1.6
SKI8	YGL213C	SOL4	P53315	255 aa		5.03	□□□□□ -1.6
SKI8	YGL213C	HEF3	P53978	1044 aa	Known RBP	5.03	□□□□□ -1.6
SKI8	YGL213C	CTL1	Q03220	320 aa	Known RBP	5.03	□□□□□ -1.6
SKI8	YGL213C	POS5	Q06892	414 aa		5.03	□□□□□ -1.6
SKI8	YGL213C	SMF3	Q12078	473 aa	Predicted RBP	5.03	□□□□□ -1.6
SKI8	YGL213C	BRR1	Q99177	341 aa	Predicted RBP	5.03	□□□□□ -1.6
SKI8	YGL213C	HIP1	P06775	603 aa		5.02	□□□□□ -1.61
SKI8	YGL213C	PEP5	P12868	1029 aa		5.02	□□□□□ -1.61
SKI8	YGL213C	URA4	P20051	364 aa		5.02	□□□□□ -1.61
SKI8	YGL213C	PUP2	P32379	260 aa		5.02	□□□□□ -1.61
SKI8	YGL213C	LTV1	P34078	463 aa		5.02	□□□□□ -1.61
SKI8	YGL213C	TCM62	P38228	572 aa	Known RBP	5.02	□□□□□ -1.61
SKI8	YGL213C	OCA1	P50946	238 aa	Predicted RBP	5.02	□□□□□ -1.61
SKI8	YGL213C	RMD9	P53140	646 aa	Known RBP	5.02	□□□□□ -1.61
SKI8	YGL213C	YNL234W	P53857	426 aa		5.02	□□□□□ -1.61
SKI8	YGL213C	RSC9	Q03124	581 aa		5.02	□□□□□ -1.61
SKI8	YGL213C	YMR130W	Q04223	302 aa		5.02	□□□□□ -1.61
SKI8	YGL213C	SSK1	Q07084	712 aa		5.02	□□□□□ -1.61
SKI8	YGL213C	RPN5	Q12250	445 aa	Known RBP	5.02	□□□□□ -1.61
SKI8	YGL213C	BRF1	P29056	596 aa		5.01	□□□□□ -1.61
SKI8	YGL213C	PIM1	P36775	1133 aa		5.01	□□□□□ -1.61
SKI8	YGL213C	SCO2	P38072	301 aa		5.01	□□□□□ -1.61
SKI8	YGL213C	PHO90	P39535	881 aa		5.01	□□□□□ -1.61
SKI8	YGL213C	TIF4631	P39935	952 aa	Known RBP	5.01	□□□□□ -1.61
SKI8	YGL213C	POP1	P41812	875 aa		5.01	□□□□□ -1.61
SKI8	YGL213C	YPT11	P48559	417 aa		5.01	□□□□□ -1.61
SKI8	YGL213C	PKP2	P53170	491 aa		5.01	□□□□□ -1.61
SKI8	YGL213C	BUD32	P53323	261 aa		5.01	□□□□□ -1.61
SKI8	YGL213C	ERG13	P54839	491 aa	Known RBP	5.01	□□□□□ -1.61
SKI8	YGL213C	ACL4	Q03771	387 aa		5.01	□□□□□ -1.61
SKI8	YGL213C	CAC2	Q04199	468 aa		5.01	□□□□□ -1.61
SKI8	YGL213C	RSF1	Q05043	376 aa		5.01	□□□□□ -1.61
SKI8	YGL213C	MMR1	Q06324	491 aa		5.01	□□□□□ -1.61
SKI8	YGL213C	GPH1	P06738	902 aa	Known RBP	5	□□□□□ -1.61
SKI8	YGL213C	MBR1	P23493	339 aa		5	□□□□□ -1.61
SKI8	YGL213C	SNC1	P31109	117 aa		5	□□□□□ -1.61
SKI8	YGL213C	RPN2	P32565	945 aa	Known RBP	5	□□□□□ -1.61
SKI8	YGL213C	MMS4	P38257	691 aa		5	□□□□□ -1.61
SKI8	YGL213C	VHC1	P38329	1120 aa		5	□□□□□ -1.61
SKI8	YGL213C	COP1	P53622	1201 aa	Known RBP	5	□□□□□ -1.61
SKI8	YGL213C	EOS1	P53938	366 aa		5	□□□□□ -1.61
SKI8	YGL213C	SLG1	P54867	378 aa		5	□□□□□ -1.61
SKI8	YGL213C	YPL014W	Q02606	381 aa		5	□□□□□ -1.61
SKI8	YGL213C	YDR286C	Q05530	114 aa		5	□□□□□ -1.61
SKI8	YGL213C	YOR365C	Q08844	703 aa		5	□□□□□ -1.61
SKI8	YGL213C	YLR112W	Q12130	139 aa		5	□□□□□ -1.61
SKI8	YGL213C	VAM3	Q12241	283 aa		5	□□□□□ -1.61
SKI8	YGL213C	FRE6	Q12473	712 aa		5	□□□□□ -1.61
SKI8	YGL213C	RAD52	P06778	471 aa	Known RBP	4.99	□□□□□ -1.61
SKI8	YGL213C	SPO7	P18410	259 aa		4.99	□□□□□ -1.61
SKI8	YGL213C	CLN1	P20437	546 aa		4.99	□□□□□ -1.61
SKI8	YGL213C	MCM4	P30665	933 aa	Known RBP	4.99	□□□□□ -1.61
SKI8	YGL213C	DUG2	P38149	878 aa		4.99	□□□□□ -1.61
SKI8	YGL213C	FLO5	P38894	1075 aa		4.99	□□□□□ -1.61
SKI8	YGL213C	VTC3	Q02725	835 aa		4.99	□□□□□ -1.61
SKI8	YGL213C	MED2	Q12124	431 aa		4.99	□□□□□ -1.61
SKI8	YGL213C	CRC1	Q12289	327 aa		4.99	□□□□□ -1.61
SKI8	YGL213C	HSP42	Q12329	375 aa		4.99	□□□□□ -1.61
SKI8	YGL213C	PGK1	P00560	416 aa	Known RBP	4.98	□□□□□ -1.61
SKI8	YGL213C	YAP1	P19880	650 aa	Known RBP	4.98	□□□□□ -1.61
SKI8	YGL213C	TOA1	P32773	286 aa		4.98	□□□□□ -1.61
SKI8	YGL213C	PEX2	P32800	271 aa		4.98	□□□□□ -1.61
SKI8	YGL213C	MSN2	P33748	704 aa		4.98	□□□□□ -1.61
SKI8	YGL213C	SWH1	P35845	1188 aa		4.98	□□□□□ -1.61
SKI8	YGL213C	CBP4	P37267	147 aa		4.98	□□□□□ -1.61
SKI8	YGL213C	TOM71	P38825	639 aa	Known RBP	4.98	□□□□□ -1.61
SKI8	YGL213C	CFD1	P40558	293 aa		4.98	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms