RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN3	YER021W	PKP2	P53170	491 aa		3.08	□□□□□ -1.92
RPN3	YER021W	PDS5	Q04264	1277 aa		3.08	□□□□□ -1.92
RPN3	YER021W	TDA9	Q04545	1251 aa		3.08	□□□□□ -1.92
RPN3	YER021W	ATG26	Q06321	1198 aa		3.08	□□□□□ -1.92
RPN3	YER021W	YDL218W	Q07629	317 aa		3.08	□□□□□ -1.92
RPN3	YER021W	RTT109	Q07794	436 aa		3.08	□□□□□ -1.92
RPN3	YER021W	APL4	Q12028	832 aa		3.08	□□□□□ -1.92
RPN3	YER021W	SNU66	Q12420	587 aa	Predicted RBP	3.08	□□□□□ -1.92
RPN3	YER021W	RTP1	Q12751	981 aa		3.08	□□□□□ -1.92
RPN3	YER021W	YOR111W	Q99210	232 aa		3.08	□□□□□ -1.92
RPN3	YER021W	SNF3	P10870	884 aa		3.07	□□□□□ -1.92
RPN3	YER021W	KAR3	P17119	729 aa		3.07	□□□□□ -1.92
RPN3	YER021W	RPB8	P20436	146 aa		3.07	□□□□□ -1.92
RPN3	YER021W	CHS3	P29465	1165 aa		3.07	□□□□□ -1.92
RPN3	YER021W	SYN8	P31377	255 aa		3.07	□□□□□ -1.92
RPN3	YER021W	YPK3	P38070	525 aa		3.07	□□□□□ -1.92
RPN3	YER021W	MAL33	P38157	468 aa		3.07	□□□□□ -1.92
RPN3	YER021W	ELO1	P39540	310 aa		3.07	□□□□□ -1.92
RPN3	YER021W	RPS10B	P46784	105 aa	Known RBP	3.07	□□□□□ -1.92
RPN3	YER021W	DIA3	P52290	468 aa		3.07	□□□□□ -1.92
RPN3	YER021W	YML037C	Q03703	340 aa		3.07	□□□□□ -1.92
RPN3	YER021W	YMR254C	Q04838	102 aa		3.07	□□□□□ -1.92
RPN3	YER021W	YDR056C	Q12025	205 aa		3.07	□□□□□ -1.92
RPN3	YER021W	FKS1	P38631	1876 aa	Known RBP	3.07	□□□□□ -1.92
RPN3	YER021W	MRP7	P12687	371 aa		3.06	□□□□□ -1.92
RPN3	YER021W	PRE8	P23639	250 aa		3.06	□□□□□ -1.92
RPN3	YER021W	VMA16	P23968	213 aa		3.06	□□□□□ -1.92
RPN3	YER021W	MGR1	P25573	417 aa		3.06	□□□□□ -1.92
RPN3	YER021W	PTK1	P36002	662 aa	Predicted RBP	3.06	□□□□□ -1.92
RPN3	YER021W	CST26	P38226	397 aa		3.06	□□□□□ -1.92
RPN3	YER021W	TSC10	P38342	320 aa		3.06	□□□□□ -1.92
RPN3	YER021W	PHO90	P39535	881 aa		3.06	□□□□□ -1.92
RPN3	YER021W	TIF4631	P39935	952 aa	Known RBP	3.06	□□□□□ -1.92
RPN3	YER021W	SGM1	P47166	707 aa		3.06	□□□□□ -1.92
RPN3	YER021W	NUP100	Q02629	959 aa		3.06	□□□□□ -1.92
RPN3	YER021W	VPS72	Q03388	795 aa		3.06	□□□□□ -1.92
RPN3	YER021W	RPS10A	Q08745	105 aa	Predicted RBP	3.06	□□□□□ -1.92
RPN3	YER021W	TCO89	Q08921	799 aa		3.06	□□□□□ -1.92
RPN3	YER021W	YPL272C	Q08984	517 aa		3.06	□□□□□ -1.92
RPN3	YER021W	NKP1	Q12493	238 aa		3.06	□□□□□ -1.92
RPN3	YER021W	RPP0	P05317	312 aa	Known RBP	3.05	□□□□□ -1.92
RPN3	YER021W	POX1	P13711	748 aa		3.05	□□□□□ -1.92
RPN3	YER021W	YCK1	P23291	538 aa		3.05	□□□□□ -1.92
RPN3	YER021W	AUR1	P36107	401 aa	Predicted RBP	3.05	□□□□□ -1.92
RPN3	YER021W	UBA4	P38820	440 aa		3.05	□□□□□ -1.92
RPN3	YER021W	YND1	P40009	630 aa		3.05	□□□□□ -1.92
RPN3	YER021W	RTS2	P40962	232 aa		3.05	□□□□□ -1.92
RPN3	YER021W	IAH1	P41734	238 aa		3.05	□□□□□ -1.92
RPN3	YER021W	FET5	P43561	622 aa		3.05	□□□□□ -1.92
RPN3	YER021W	SMA1	Q02651	245 aa		3.05	□□□□□ -1.92
RPN3	YER021W	EMI2	Q04409	500 aa	Known RBP	3.05	□□□□□ -1.92
RPN3	YER021W	ARD1	P07347	238 aa	Predicted RBP	3.04	□□□□□ -1.92
RPN3	YER021W	ADH7	P25377	361 aa		3.04	□□□□□ -1.92
RPN3	YER021W	GID7	P25569	745 aa		3.04	□□□□□ -1.92
RPN3	YER021W	AGP2	P38090	596 aa		3.04	□□□□□ -1.92
RPN3	YER021W	DUO1	P53168	247 aa	Known RBP	3.04	□□□□□ -1.92
RPN3	YER021W	NGL3	Q03210	505 aa		3.04	□□□□□ -1.92
RPN3	YER021W	TMA64	Q04600	565 aa	Known RBP	3.04	□□□□□ -1.92
RPN3	YER021W	RSF1	Q05043	376 aa		3.04	□□□□□ -1.92
RPN3	YER021W	GRC3	Q07845	632 aa		3.04	□□□□□ -1.92
RPN3	YER021W	LEU9	Q12166	604 aa	Known RBP	3.04	□□□□□ -1.92
RPN3	YER021W	SPE4	Q12455	300 aa		3.04	□□□□□ -1.92
RPN3	YER021W	PUT2	P07275	575 aa		3.04	□□□□□ -1.92
RPN3	YER021W	SNA3	P14359	133 aa		3.04	□□□□□ -1.92
RPN3	YER021W	HNM1	P19807	563 aa		3.04	□□□□□ -1.92
RPN3	YER021W	KGD1	P20967	1014 aa	Known RBP	3.04	□□□□□ -1.92
RPN3	YER021W	SAN1	P22470	610 aa		3.04	□□□□□ -1.92
RPN3	YER021W	POL4	P25615	582 aa		3.04	□□□□□ -1.92
RPN3	YER021W	RKM3	P38222	552 aa		3.04	□□□□□ -1.92
RPN3	YER021W	DBP8	P38719	431 aa		3.04	□□□□□ -1.92
RPN3	YER021W	UPF3	P48412	387 aa	Known RBP	3.04	□□□□□ -1.92
RPN3	YER021W	PYK2	P52489	506 aa	Known RBP	3.04	□□□□□ -1.92
RPN3	YER021W	SCS3	P53012	380 aa		3.04	□□□□□ -1.92
RPN3	YER021W	RRP46	P53256	223 aa	Predicted RBP	3.04	□□□□□ -1.92
RPN3	YER021W	SOL4	P53315	255 aa		3.04	□□□□□ -1.92
RPN3	YER021W	EFM6	P53970	246 aa		3.04	□□□□□ -1.92
RPN3	YER021W	DPB4	Q04603	196 aa	Known RBP	3.04	□□□□□ -1.92
RPN3	YER021W	FMP42	Q04991	504 aa		3.04	□□□□□ -1.92
RPN3	YER021W	INM2	Q05533	292 aa		3.04	□□□□□ -1.92
RPN3	YER021W	YLR281C	Q05863	155 aa		3.04	□□□□□ -1.92
RPN3	YER021W	TEN1	Q07921	160 aa		3.04	□□□□□ -1.92
RPN3	YER021W	BSC1	Q12140	328 aa		3.04	□□□□□ -1.92
RPN3	YER021W	YBR126W-A	Q8TGU7	68 aa		3.04	□□□□□ -1.92
RPN3	YER021W	AAC3	P18238	307 aa		3.03	□□□□□ -1.92
RPN3	YER021W	PPZ1	P26570	692 aa		3.03	□□□□□ -1.92
RPN3	YER021W	UTR4	P32626	227 aa		3.03	□□□□□ -1.92
RPN3	YER021W	RAD24	P32641	659 aa		3.03	□□□□□ -1.92
RPN3	YER021W	YBL029W	P38201	376 aa		3.03	□□□□□ -1.92
RPN3	YER021W	NOP16	P40007	231 aa	Known RBP	3.03	□□□□□ -1.92
RPN3	YER021W	RGI2	P40188	164 aa		3.03	□□□□□ -1.92
RPN3	YER021W	MEP2	P41948	499 aa		3.03	□□□□□ -1.92
RPN3	YER021W	LCL3	P53153	274 aa		3.03	□□□□□ -1.92
RPN3	YER021W	ERG26	P53199	349 aa	Known RBP	3.03	□□□□□ -1.92
RPN3	YER021W	RSM23	Q01163	450 aa		3.03	□□□□□ -1.92
RPN3	YER021W	YDL121C	Q07541	149 aa		3.03	□□□□□ -1.92
RPN3	YER021W	RDR1	Q08904	546 aa		3.03	□□□□□ -1.92
RPN3	YER021W	RRI2	Q12348	645 aa		3.03	□□□□□ -1.92
RPN3	YER021W	RIF1	P29539	1916 aa		3.02	□□□□□ -1.93
RPN3	YER021W	SEM1	O94742	89 aa		3.02	□□□□□ -1.93
RPN3	YER021W	ARG81	P05085	880 aa		3.02	□□□□□ -1.93

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