RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C DBP7P36120 742 aaKnown RBP3.38□□□□□ -1.87
CDC40YDR364C PCH2P38126 564 aa3.38□□□□□ -1.87
CDC40YDR364C ERC1P38767 581 aa3.38□□□□□ -1.87
CDC40YDR364C SLZ1P40167 298 aa3.38□□□□□ -1.87
CDC40YDR364C LRO1P40345 661 aa3.38□□□□□ -1.87
CDC40YDR364C SHQ1P40486 507 aaPredicted RBP3.38□□□□□ -1.87
CDC40YDR364C ZIM17P42844 174 aa3.38□□□□□ -1.87
CDC40YDR364C APT1P49435 187 aaKnown RBP3.38□□□□□ -1.87
CDC40YDR364C ALF1P53904 254 aa3.38□□□□□ -1.87
CDC40YDR364C TIM8P57744 87 aa3.38□□□□□ -1.87
CDC40YDR364C MUB1Q03162 620 aa3.38□□□□□ -1.87
CDC40YDR364C YML119WQ03208 357 aa3.38□□□□□ -1.87
CDC40YDR364C YDR131CQ03899 556 aa3.38□□□□□ -1.87
CDC40YDR364C PGC1Q08959 321 aa3.38□□□□□ -1.87
CDC40YDR364C PLP2Q12017 286 aa3.38□□□□□ -1.87
CDC40YDR364C SWT1Q12104 458 aa3.38□□□□□ -1.87
CDC40YDR364C YOR019WQ99248 730 aa3.38□□□□□ -1.87
CDC40YDR364C MAS2P11914 482 aa3.37□□□□□ -1.87
CDC40YDR364C STE12P13574 688 aa3.37□□□□□ -1.87
CDC40YDR364C SPO12P17123 173 aa3.37□□□□□ -1.87
CDC40YDR364C REC107P21651 314 aa3.37□□□□□ -1.87
CDC40YDR364C MUD1P32605 298 aaKnown RBP3.37□□□□□ -1.87
CDC40YDR364C YKL023WP36103 277 aaKnown RBP3.37□□□□□ -1.87
CDC40YDR364C AUR1P36107 401 aaPredicted RBP3.37□□□□□ -1.87
CDC40YDR364C PXL1P36166 706 aa3.37□□□□□ -1.87
CDC40YDR364C SMC2P38989 1170 aaKnown RBP3.37□□□□□ -1.87
CDC40YDR364C YEL057CP39983 233 aa3.37□□□□□ -1.87
CDC40YDR364C MIT1P40002 666 aa3.37□□□□□ -1.87
CDC40YDR364C RGI2P40188 164 aa3.37□□□□□ -1.87
CDC40YDR364C SEC9P40357 651 aa3.37□□□□□ -1.87
CDC40YDR364C CAF130P53280 1122 aaPredicted RBP3.37□□□□□ -1.87
CDC40YDR364C VPS9P54787 451 aa3.37□□□□□ -1.87
CDC40YDR364C VTC3Q02725 835 aa3.37□□□□□ -1.87
CDC40YDR364C NGL2Q03264 515 aaKnown RBP3.37□□□□□ -1.87
CDC40YDR364C ERB1Q04660 807 aaKnown RBP3.37□□□□□ -1.87
CDC40YDR364C DON1Q05610 365 aa3.37□□□□□ -1.87
CDC40YDR364C COQ9Q05779 260 aa3.37□□□□□ -1.87
CDC40YDR364C YLR345WQ06137 509 aa3.37□□□□□ -1.87
CDC40YDR364C ARR3Q06598 404 aa3.37□□□□□ -1.87
CDC40YDR364C RLP24Q07915 199 aaKnown RBP3.37□□□□□ -1.87
CDC40YDR364C CHS5Q12114 671 aaKnown RBP3.37□□□□□ -1.87
CDC40YDR364C PDH1Q12428 516 aaKnown RBP3.37□□□□□ -1.87
CDC40YDR364C YOL159C-AQ3E769 90 aa3.37□□□□□ -1.87
CDC40YDR364C YBR085C-AO43137 85 aa3.36□□□□□ -1.87
CDC40YDR364C POX1P13711 748 aa3.36□□□□□ -1.87
CDC40YDR364C KAR3P17119 729 aa3.36□□□□□ -1.87
CDC40YDR364C TRX1P22217 103 aaKnown RBP3.36□□□□□ -1.87
CDC40YDR364C CLB1P24868 471 aa3.36□□□□□ -1.87
CDC40YDR364C RAD57P25301 460 aa3.36□□□□□ -1.87
CDC40YDR364C URK1P27515 501 aa3.36□□□□□ -1.87
CDC40YDR364C CAP1P28495 268 aaKnown RBP3.36□□□□□ -1.87
CDC40YDR364C COT1P32798 439 aa3.36□□□□□ -1.87
CDC40YDR364C SMF1P38925 575 aa3.36□□□□□ -1.87
CDC40YDR364C SEC28P40509 296 aaKnown RBP3.36□□□□□ -1.87
CDC40YDR364C IME4P41833 600 aa3.36□□□□□ -1.87
CDC40YDR364C MAF1P41910 395 aa3.36□□□□□ -1.87
CDC40YDR364C TAX4P47030 604 aa3.36□□□□□ -1.87
CDC40YDR364C GPI8P49018 411 aa3.36□□□□□ -1.87
CDC40YDR364C ASN1P49089 572 aaKnown RBP3.36□□□□□ -1.87
CDC40YDR364C CUL3P53202 744 aa3.36□□□□□ -1.87
CDC40YDR364C YGR151CP53287 111 aa3.36□□□□□ -1.87
CDC40YDR364C RTT102P53330 157 aa3.36□□□□□ -1.87
CDC40YDR364C INN1P53901 409 aa3.36□□□□□ -1.87
CDC40YDR364C YNL146WP53906 100 aa3.36□□□□□ -1.87
CDC40YDR364C STP1Q00947 519 aa3.36□□□□□ -1.87
CDC40YDR364C PEX25Q02969 394 aa3.36□□□□□ -1.87
CDC40YDR364C VPS60Q03390 229 aa3.36□□□□□ -1.87
CDC40YDR364C YDR239CQ03780 787 aa3.36□□□□□ -1.87
CDC40YDR364C YLR297WQ05899 129 aa3.36□□□□□ -1.87
CDC40YDR364C IES4Q08561 116 aa3.36□□□□□ -1.87
CDC40YDR364C PET111P08468 800 aa3.35□□□□□ -1.87
CDC40YDR364C SNA3P14359 133 aa3.35□□□□□ -1.87
CDC40YDR364C PRP28P23394 588 aa3.35□□□□□ -1.87
CDC40YDR364C YCR061WP25639 631 aa3.35□□□□□ -1.87
CDC40YDR364C PAP1P29468 568 aaKnown RBP3.35□□□□□ -1.87
CDC40YDR364C RPN2P32565 945 aaKnown RBP3.35□□□□□ -1.87
CDC40YDR364C SRB4P32569 687 aa3.35□□□□□ -1.87
CDC40YDR364C SKG6P32900 734 aaPredicted RBP3.35□□□□□ -1.87
CDC40YDR364C KES1P35844 434 aaKnown RBP3.35□□□□□ -1.87
CDC40YDR364C VID24P38263 362 aa3.35□□□□□ -1.87
CDC40YDR364C MET18P40469 1032 aa3.35□□□□□ -1.87
CDC40YDR364C SCD6P45978 349 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
CDC40YDR364C MPS3P47069 682 aa3.35□□□□□ -1.87
CDC40YDR364C HSH155P49955 971 aaKnown RBP3.35□□□□□ -1.87
CDC40YDR364C SHE10P53075 577 aa3.35□□□□□ -1.87
CDC40YDR364C YGR066CP53242 292 aa3.35□□□□□ -1.87
CDC40YDR364C NNF2P53253 936 aa3.35□□□□□ -1.87
CDC40YDR364C SPC98P53540 846 aa3.35□□□□□ -1.87
CDC40YDR364C ESBP6P53918 673 aa3.35□□□□□ -1.87
CDC40YDR364C OAZ1Q02803 292 aa3.35□□□□□ -1.87
CDC40YDR364C BUD22Q04347 519 aaKnown RBP3.35□□□□□ -1.87
CDC40YDR364C SOV1Q04748 898 aa3.35□□□□□ -1.87
CDC40YDR364C YEH1Q07804 573 aa3.35□□□□□ -1.87
CDC40YDR364C YJR112W-AQ3E743 109 aa3.35□□□□□ -1.87
CDC40YDR364C YER175W-AQ8TGU4 54 aa3.35□□□□□ -1.87
CDC40YDR364C EST1P17214 699 aaPredicted RBP3.34□□□□□ -1.88
CDC40YDR364C CKI1P20485 582 aa3.34□□□□□ -1.88
CDC40YDR364C PDE1P22434 369 aa3.34□□□□□ -1.88
CDC40YDR364C LRE1P25579 583 aaKnown RBP3.34□□□□□ -1.88
CDC40YDR364C YCR051WP25631 222 aa3.34□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms