RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTN1	YDR233C	MSS11	Q03825	758 aa		5.02	□□□□□ -1.61
RTN1	YDR233C	PDS5	Q04264	1277 aa		5.02	□□□□□ -1.61
RTN1	YDR233C	RQC1	Q05468	723 aa	Known RBP	5.02	□□□□□ -1.61
RTN1	YDR233C	THP1	Q08231	455 aa		5.02	□□□□□ -1.61
RTN1	YDR233C	SRL1	Q08673	210 aa		5.02	□□□□□ -1.61
RTN1	YDR233C	COR1	P07256	457 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	BAR1	P12630	587 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	FUR1	P18562	216 aa	Known RBP	5.01	□□□□□ -1.61
RTN1	YDR233C	TYR1	P20049	452 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	BUD14	P27637	709 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	ACH1	P32316	526 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	MSN2	P33748	704 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	MET30	P39014	640 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	YIL169C	P40442	995 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	AZF1	P41696	914 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	GPD2	P41911	440 aa	Known RBP	5.01	□□□□□ -1.61
RTN1	YDR233C	HXT14	P42833	540 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	VTC2	P43585	828 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	HEF3	P53978	1044 aa	Known RBP	5.01	□□□□□ -1.61
RTN1	YDR233C	YMR155W	Q03795	547 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	YMR087W	Q04299	284 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	FMP45	Q07651	309 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	ARP6	Q12509	438 aa		5.01	□□□□□ -1.61
RTN1	YDR233C	SUC2	P00724	532 aa		5	□□□□□ -1.61
RTN1	YDR233C	RAD24	P32641	659 aa		5	□□□□□ -1.61
RTN1	YDR233C	SAS3	P34218	831 aa		5	□□□□□ -1.61
RTN1	YDR233C	TCM62	P38228	572 aa	Known RBP	5	□□□□□ -1.61
RTN1	YDR233C	VMA13	P41807	478 aa	Known RBP	5	□□□□□ -1.61
RTN1	YDR233C	RBS1	Q05672	457 aa	Known RBP	5	□□□□□ -1.61
RTN1	YDR233C	YLR352W	Q06479	807 aa		5	□□□□□ -1.61
RTN1	YDR233C	THI20	Q08224	551 aa		5	□□□□□ -1.61
RTN1	YDR233C	PDH1	Q12428	516 aa	Known RBP	5	□□□□□ -1.61
RTN1	YDR233C	YML133C	Q03099	1374 aa		5	□□□□□ -1.61
RTN1	YDR233C	YLL067C	Q07888	1374 aa		5	□□□□□ -1.61
RTN1	YDR233C	YLL066C	Q99208	1374 aa		5	□□□□□ -1.61
RTN1	YDR233C	RPL31B	P0C2H9	113 aa	Known RBP	4.99	□□□□□ -1.61
RTN1	YDR233C	GLN3	P18494	730 aa		4.99	□□□□□ -1.61
RTN1	YDR233C	PAP1	P29468	568 aa	Known RBP	4.99	□□□□□ -1.61
RTN1	YDR233C	ERG1	P32476	496 aa	Known RBP	4.99	□□□□□ -1.61
RTN1	YDR233C	BNA4	P38169	460 aa		4.99	□□□□□ -1.61
RTN1	YDR233C	MBB1	P39534	108 aa		4.99	□□□□□ -1.61
RTN1	YDR233C	YMR147W	P40218	223 aa	Known RBP	4.99	□□□□□ -1.61
RTN1	YDR233C	YIR014W	P40570	242 aa		4.99	□□□□□ -1.61
RTN1	YDR233C	ATG27	P46989	271 aa		4.99	□□□□□ -1.61
RTN1	YDR233C	ALT2	P52892	507 aa		4.99	□□□□□ -1.61
RTN1	YDR233C	SAM50	P53969	484 aa		4.99	□□□□□ -1.61
RTN1	YDR233C	RPA49	Q01080	415 aa	Predicted RBP	4.99	□□□□□ -1.61
RTN1	YDR233C	SPC19	Q03954	165 aa		4.99	□□□□□ -1.61
RTN1	YDR233C	RBA50	Q04418	439 aa		4.99	□□□□□ -1.61
RTN1	YDR233C	FMP42	Q04991	504 aa		4.99	□□□□□ -1.61
RTN1	YDR233C	YAP7	Q08182	245 aa		4.99	□□□□□ -1.61
RTN1	YDR233C	PPZ1	P26570	692 aa		4.98	□□□□□ -1.61
RTN1	YDR233C	ECM15	P35195	104 aa		4.98	□□□□□ -1.61
RTN1	YDR233C	BYE1	P36106	594 aa		4.98	□□□□□ -1.61
RTN1	YDR233C	DUG2	P38149	878 aa		4.98	□□□□□ -1.61
RTN1	YDR233C	TDA7	P53882	636 aa	Predicted RBP	4.98	□□□□□ -1.61
RTN1	YDR233C	YDR415C	Q04033	374 aa	Predicted RBP	4.98	□□□□□ -1.61
RTN1	YDR233C	CSR2	Q12734	1121 aa		4.98	□□□□□ -1.61
RTN1	YDR233C	RAV1	P47104	1357 aa		4.97	□□□□□ -1.61
RTN1	YDR233C	ATP11	P32453	318 aa		4.97	□□□□□ -1.61
RTN1	YDR233C	HXT3	P32466	567 aa	Known RBP	4.97	□□□□□ -1.61
RTN1	YDR233C	MFT1	P33441	392 aa	Known RBP	4.97	□□□□□ -1.61
RTN1	YDR233C	MIC60	P36112	540 aa		4.97	□□□□□ -1.61
RTN1	YDR233C	KTR5	P53966	522 aa	Predicted RBP	4.97	□□□□□ -1.61
RTN1	YDR233C	SEC5	P89102	971 aa		4.97	□□□□□ -1.61
RTN1	YDR233C	YLR281C	Q05863	155 aa		4.97	□□□□□ -1.61
RTN1	YDR233C	SFI1	Q12369	946 aa		4.97	□□□□□ -1.61
RTN1	YDR233C	RRD2	Q12461	358 aa		4.97	□□□□□ -1.61
RTN1	YDR233C	APE1	P14904	514 aa		4.96	□□□□□ -1.62
RTN1	YDR233C	CDC23	P16522	626 aa		4.96	□□□□□ -1.62
RTN1	YDR233C	SEC1	P30619	724 aa	Known RBP	4.96	□□□□□ -1.62
RTN1	YDR233C	RPN2	P32565	945 aa	Known RBP	4.96	□□□□□ -1.62
RTN1	YDR233C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
RTN1	YDR233C	YGL108C	P53139	140 aa		4.96	□□□□□ -1.62
RTN1	YDR233C	ZPR1	P53303	486 aa	Known RBP	4.96	□□□□□ -1.62
RTN1	YDR233C	SLD5	Q03406	294 aa		4.96	□□□□□ -1.62
RTN1	YDR233C	NUP53	Q03790	475 aa		4.96	□□□□□ -1.62
RTN1	YDR233C	CLB3	P24870	427 aa		4.95	□□□□□ -1.62
RTN1	YDR233C	RPC53	P25441	422 aa		4.95	□□□□□ -1.62
RTN1	YDR233C	OSH3	P38713	996 aa	Known RBP	4.95	□□□□□ -1.62
RTN1	YDR233C	CSM2	P40465	213 aa		4.95	□□□□□ -1.62
RTN1	YDR233C	YDR131C	Q03899	556 aa		4.95	□□□□□ -1.62
RTN1	YDR233C	GLO2	Q05584	274 aa		4.95	□□□□□ -1.62
RTN1	YDR233C	BNA5	Q05979	453 aa		4.95	□□□□□ -1.62
RTN1	YDR233C	PHO92	Q06390	306 aa		4.95	□□□□□ -1.62
RTN1	YDR233C	ISN1	Q99312	450 aa		4.95	□□□□□ -1.62
RTN1	YDR233C	MES1	P00958	751 aa	Known RBP	4.94	□□□□□ -1.62
RTN1	YDR233C	RPL3	P14126	387 aa	Known RBP	4.94	□□□□□ -1.62
RTN1	YDR233C	AMD1	P15274	810 aa	Known RBP	4.94	□□□□□ -1.62
RTN1	YDR233C	YCR007C	P25354	239 aa		4.94	□□□□□ -1.62
RTN1	YDR233C	SPB1	P25582	841 aa	Predicted RBP	4.94	□□□□□ -1.62
RTN1	YDR233C	UTR4	P32626	227 aa		4.94	□□□□□ -1.62
RTN1	YDR233C	FRE1	P32791	686 aa		4.94	□□□□□ -1.62
RTN1	YDR233C	VPS17	P32913	551 aa		4.94	□□□□□ -1.62
RTN1	YDR233C	OTU2	P38747	307 aa	Known RBP	4.94	□□□□□ -1.62
RTN1	YDR233C	VPS52	P39904	641 aa		4.94	□□□□□ -1.62
RTN1	YDR233C	LSC1	P53598	329 aa	Known RBP	4.94	□□□□□ -1.62
RTN1	YDR233C	ARX1	Q03862	593 aa	Known RBP	4.94	□□□□□ -1.62
RTN1	YDR233C	IVY1	Q04934	453 aa		4.94	□□□□□ -1.62
RTN1	YDR233C	CFT2	Q12102	859 aa	Predicted RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms