RNA–Protein interactions for RNA: YDL001W

RMD1, Transcript of Cytoplasmic protein required for sporulation, yeast

Gene RMD1, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RMD1	YDL001W	PUT2	P07275	575 aa		4.82	□□□□□ -1.64
RMD1	YDL001W	BUD5	P25300	642 aa	Predicted RBP	4.82	□□□□□ -1.64
RMD1	YDL001W	NPL6	P32832	435 aa		4.82	□□□□□ -1.64
RMD1	YDL001W	ROT2	P38138	954 aa		4.82	□□□□□ -1.64
RMD1	YDL001W	SMF1	P38925	575 aa		4.82	□□□□□ -1.64
RMD1	YDL001W	YNL234W	P53857	426 aa		4.82	□□□□□ -1.64
RMD1	YDL001W	JJJ1	P53863	590 aa		4.82	□□□□□ -1.64
RMD1	YDL001W	ARP10	Q04549	284 aa		4.82	□□□□□ -1.64
RMD1	YDL001W	YDL057W	Q07379	328 aa		4.82	□□□□□ -1.64
RMD1	YDL001W	CDC45	Q08032	650 aa		4.82	□□□□□ -1.64
RMD1	YDL001W	ETT1	Q08421	412 aa	Known RBP	4.82	□□□□□ -1.64
RMD1	YDL001W	RSF2	P46974	1380 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	PTP1	P25044	335 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	GAC1	P28006	793 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	NFU1	P32860	256 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	PMT1	P33775	817 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	ARP1	P38696	384 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	MSR1	P38714	643 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	TOM71	P38825	639 aa	Known RBP	4.81	□□□□□ -1.64
RMD1	YDL001W	CIN4	P39110	191 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	GAT1	P43574	510 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	YGR126W	P53274	230 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	STP1	Q00947	519 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	YVH1	Q02256	364 aa	Known RBP	4.81	□□□□□ -1.64
RMD1	YDL001W	MSC1	Q03104	513 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	FIN1	Q03898	291 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	CAC2	Q04199	468 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	COQ9	Q05779	260 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	YOL159C-A	Q3E769	90 aa		4.81	□□□□□ -1.64
RMD1	YDL001W	CBP1	P07252	654 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	MDM10	P18409	493 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	CLB3	P24870	427 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	PRD1	P25375	712 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	MRE11	P32829	692 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	SAS3	P34218	831 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	MTR2	P34232	184 aa	Known RBP	4.8	□□□□□ -1.64
RMD1	YDL001W	CMC1	P36064	111 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	UBA4	P38820	440 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	LSM5	P40089	93 aa	Known RBP	4.8	□□□□□ -1.64
RMD1	YDL001W	LTP1	P40347	161 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	PKP2	P53170	491 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	TWF1	P53250	332 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	CAF130	P53280	1122 aa	Predicted RBP	4.8	□□□□□ -1.64
RMD1	YDL001W	CTL1	Q03220	320 aa	Known RBP	4.8	□□□□□ -1.64
RMD1	YDL001W	IZH1	Q03419	316 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	SLM3	Q12093	417 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	HER1	Q12276	1246 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	TY4B-H	P0C2J7	1802 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	TY4B-J	P47024	1803 aa		4.8	□□□□□ -1.64
RMD1	YDL001W	SUI2	P20459	304 aa	Known RBP	4.79	□□□□□ -1.64
RMD1	YDL001W	YMR124W	P39523	943 aa	Known RBP	4.79	□□□□□ -1.64
RMD1	YDL001W	HXT14	P42833	540 aa		4.79	□□□□□ -1.64
RMD1	YDL001W	SNG1	P46950	547 aa		4.79	□□□□□ -1.64
RMD1	YDL001W	NET1	P47035	1189 aa		4.79	□□□□□ -1.64
RMD1	YDL001W	BNA3	P47039	444 aa	Known RBP	4.79	□□□□□ -1.64
RMD1	YDL001W	PYK2	P52489	506 aa	Known RBP	4.79	□□□□□ -1.64
RMD1	YDL001W	YGR250C	P53316	781 aa	Known RBP	4.79	□□□□□ -1.64
RMD1	YDL001W	SMM1	P53720	384 aa	Known RBP	4.79	□□□□□ -1.64
RMD1	YDL001W	PDS5	Q04264	1277 aa		4.79	□□□□□ -1.64
RMD1	YDL001W	GSH2	Q08220	491 aa		4.79	□□□□□ -1.64
RMD1	YDL001W	YRF1-4	O13559	1382 aa		4.78	□□□□□ -1.64
RMD1	YDL001W	SPT7	P35177	1332 aa		4.78	□□□□□ -1.64
RMD1	YDL001W	RPL42A	P0CX27	106 aa	Known RBP	4.78	□□□□□ -1.64
RMD1	YDL001W	RPL42B	P0CX28	106 aa	Known RBP	4.78	□□□□□ -1.64
RMD1	YDL001W	RPC53	P25441	422 aa		4.78	□□□□□ -1.64
RMD1	YDL001W	YPT53	P36019	220 aa		4.78	□□□□□ -1.64
RMD1	YDL001W	OTU2	P38747	307 aa	Known RBP	4.78	□□□□□ -1.64
RMD1	YDL001W	AXL1	P40851	1208 aa		4.78	□□□□□ -1.64
RMD1	YDL001W	STB2	P46679	850 aa		4.78	□□□□□ -1.64
RMD1	YDL001W	TOF2	Q02208	771 aa		4.78	□□□□□ -1.64
RMD1	YDL001W	ATX2	Q12067	313 aa		4.78	□□□□□ -1.64
RMD1	YDL001W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
RMD1	YDL001W	SEC39	Q12745	709 aa		4.78	□□□□□ -1.64
RMD1	YDL001W	FKS3	Q04952	1785 aa		4.78	□□□□□ -1.64
RMD1	YDL001W	ADE6	P38972	1358 aa	Known RBP	4.78	□□□□□ -1.64
RMD1	YDL001W	YER190C-B	P0CX94	160 aa		4.77	□□□□□ -1.65
RMD1	YDL001W	YEL077W-A	P0CX95	160 aa		4.77	□□□□□ -1.65
RMD1	YDL001W	YGR296C-B	P0CX96	160 aa		4.77	□□□□□ -1.65
RMD1	YDL001W	YPL283W-B	P0CX97	160 aa		4.77	□□□□□ -1.65
RMD1	YDL001W	YPR204C-A	P0CX98	160 aa		4.77	□□□□□ -1.65
RMD1	YDL001W	RPL3	P14126	387 aa	Known RBP	4.77	□□□□□ -1.65
RMD1	YDL001W	PAP1	P29468	568 aa	Known RBP	4.77	□□□□□ -1.65
RMD1	YDL001W	DBF4	P32325	704 aa		4.77	□□□□□ -1.65
RMD1	YDL001W	YIR016W	P40572	265 aa		4.77	□□□□□ -1.65
RMD1	YDL001W	EAF6	P47128	113 aa		4.77	□□□□□ -1.65
RMD1	YDL001W	SOL4	P53315	255 aa		4.77	□□□□□ -1.65
RMD1	YDL001W	RPL15B	P54780	204 aa	Predicted RBP	4.77	□□□□□ -1.65
RMD1	YDL001W	YMR160W	Q03823	816 aa		4.77	□□□□□ -1.65
RMD1	YDL001W	RQC1	Q05468	723 aa	Known RBP	4.77	□□□□□ -1.65
RMD1	YDL001W	YDL007C-A	Q2V2Q0	85 aa		4.77	□□□□□ -1.65
RMD1	YDL001W	YPR089W	O13585	888 aa		4.76	□□□□□ -1.65
RMD1	YDL001W	PDX1	P16451	410 aa		4.76	□□□□□ -1.65
RMD1	YDL001W	ELO2	P25358	347 aa		4.76	□□□□□ -1.65
RMD1	YDL001W	ECM32	P32644	1121 aa	Known RBP	4.76	□□□□□ -1.65
RMD1	YDL001W	PDR3	P33200	976 aa		4.76	□□□□□ -1.65
RMD1	YDL001W	YKL023W	P36103	277 aa	Known RBP	4.76	□□□□□ -1.65
RMD1	YDL001W	RKM3	P38222	552 aa		4.76	□□□□□ -1.65
RMD1	YDL001W	LEU5	P38702	357 aa		4.76	□□□□□ -1.65
RMD1	YDL001W	SSU1	P41930	458 aa		4.76	□□□□□ -1.65
RMD1	YDL001W	EKI1	Q03764	534 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms