RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W LCL3P53153 274 aa4.12□□□□□ -1.75
SSU72YNL222W BUD32P53323 261 aa4.12□□□□□ -1.75
SSU72YNL222W GLO2Q05584 274 aa4.12□□□□□ -1.75
SSU72YNL222W ETT1Q08421 412 aaKnown RBP4.12□□□□□ -1.75
SSU72YNL222W SET6Q12529 373 aa4.12□□□□□ -1.75
SSU72YNL222W MF(ALPHA)1P01149 165 aa4.11□□□□□ -1.75
SSU72YNL222W GDH1P07262 454 aaKnown RBP4.11□□□□□ -1.75
SSU72YNL222W MTF1P14908 341 aaKnown RBP4.11□□□□□ -1.75
SSU72YNL222W SGF29P25554 259 aa4.11□□□□□ -1.75
SSU72YNL222W POL4P25615 582 aa4.11□□□□□ -1.75
SSU72YNL222W RPL32P38061 130 aaKnown RBP4.11□□□□□ -1.75
SSU72YNL222W AFG3P39925 761 aa4.11□□□□□ -1.75
SSU72YNL222W RPH1P39956 796 aa4.11□□□□□ -1.75
SSU72YNL222W RPR2P40571 144 aa4.11□□□□□ -1.75
SSU72YNL222W YJL213WP40896 331 aa4.11□□□□□ -1.75
SSU72YNL222W YFR016CP43597 1233 aaKnown RBP4.11□□□□□ -1.75
SSU72YNL222W YDL186WP48568 277 aa4.11□□□□□ -1.75
SSU72YNL222W YGR127WP53275 312 aa4.11□□□□□ -1.75
SSU72YNL222W BUD22Q04347 519 aaKnown RBP4.11□□□□□ -1.75
SSU72YNL222W SPE4Q12455 300 aa4.11□□□□□ -1.75
SSU72YNL222W APE1P14904 514 aa4.1□□□□□ -1.75
SSU72YNL222W YIH1P25637 258 aa4.1□□□□□ -1.75
SSU72YNL222W CHS3P29465 1165 aa4.1□□□□□ -1.75
SSU72YNL222W UBP11P36026 717 aa4.1□□□□□ -1.75
SSU72YNL222W YKL023WP36103 277 aaKnown RBP4.1□□□□□ -1.75
SSU72YNL222W YBR139WP38109 508 aa4.1□□□□□ -1.75
SSU72YNL222W YEL068CP39977 110 aa4.1□□□□□ -1.75
SSU72YNL222W APT1P49435 187 aaKnown RBP4.1□□□□□ -1.75
SSU72YNL222W SHR3Q02774 210 aa4.1□□□□□ -1.75
SSU72YNL222W YDL057WQ07379 328 aa4.1□□□□□ -1.75
SSU72YNL222W LUC7Q07508 261 aaPredicted RBP4.1□□□□□ -1.75
SSU72YNL222W SDH5Q08230 162 aa4.1□□□□□ -1.75
SSU72YNL222W PEP5P12868 1029 aa4.09□□□□□ -1.75
SSU72YNL222W YCK1P23291 538 aa4.09□□□□□ -1.75
SSU72YNL222W SSE2P32590 693 aaKnown RBP4.09□□□□□ -1.75
SSU72YNL222W YBL029WP38201 376 aa4.09□□□□□ -1.75
SSU72YNL222W OSH3P38713 996 aaKnown RBP4.09□□□□□ -1.75
SSU72YNL222W CSM2P40465 213 aa4.09□□□□□ -1.75
SSU72YNL222W DSD1P53095 428 aa4.09□□□□□ -1.75
SSU72YNL222W YGR126WP53274 230 aa4.09□□□□□ -1.75
SSU72YNL222W RLI1Q03195 608 aaKnown RBP4.09□□□□□ -1.75
SSU72YNL222W SGS1P35187 1447 aa4.09□□□□□ -1.75
SSU72YNL222W CDC16P09798 840 aa4.08□□□□□ -1.76
SSU72YNL222W NOP1P15646 327 aaKnown RBP4.08□□□□□ -1.76
SSU72YNL222W MCK1P21965 375 aaKnown RBP4.08□□□□□ -1.76
SSU72YNL222W MCM10P32354 571 aa4.08□□□□□ -1.76
SSU72YNL222W SPC110P32380 944 aa4.08□□□□□ -1.76
SSU72YNL222W YBR144CP34215 104 aa4.08□□□□□ -1.76
SSU72YNL222W MTC4P38335 694 aaKnown RBP4.08□□□□□ -1.76
SSU72YNL222W COS10P52924 374 aa4.08□□□□□ -1.76
SSU72YNL222W ERP1Q05359 219 aaKnown RBP4.08□□□□□ -1.76
SSU72YNL222W OPY2Q06810 360 aa4.08□□□□□ -1.76
SSU72YNL222W NCE102Q12207 173 aaRIP-Chip data4.08□□□□□ -1.76not detected
SSU72YNL222W YBR126W-AQ8TGU7 68 aa4.08□□□□□ -1.76
SSU72YNL222W SSH4P32343 579 aa4.07□□□□□ -1.76
SSU72YNL222W EBP2P36049 427 aaKnown RBP4.07□□□□□ -1.76
SSU72YNL222W MUD2P36084 527 aaKnown RBP4.07□□□□□ -1.76
SSU72YNL222W SDS24P38314 527 aa4.07□□□□□ -1.76
SSU72YNL222W SCD6P45978 349 aaKnown RBP RIP-Chip data4.07□□□□□ -1.76not detected
SSU72YNL222W DRN1P53255 507 aaKnown RBP4.07□□□□□ -1.76
SSU72YNL222W YKU80Q04437 629 aa4.07□□□□□ -1.76
SSU72YNL222W TLG2Q08144 397 aa4.07□□□□□ -1.76
SSU72YNL222W RSA1Q08932 381 aa4.07□□□□□ -1.76
SSU72YNL222W FMP40Q08968 688 aaPredicted RBP4.07□□□□□ -1.76
SSU72YNL222W AYT1Q12226 474 aa4.07□□□□□ -1.76
SSU72YNL222W CAR1P00812 333 aaKnown RBP4.06□□□□□ -1.76
SSU72YNL222W MRP13P12686 339 aa4.06□□□□□ -1.76
SSU72YNL222W FRE1P32791 686 aa4.06□□□□□ -1.76
SSU72YNL222W AVT5P38176 459 aa4.06□□□□□ -1.76
SSU72YNL222W ALT2P52892 507 aa4.06□□□□□ -1.76
SSU72YNL222W DUO1P53168 247 aaKnown RBP4.06□□□□□ -1.76
SSU72YNL222W NGL3Q03210 505 aa4.06□□□□□ -1.76
SSU72YNL222W HEM2P05373 342 aa4.05□□□□□ -1.76
SSU72YNL222W RPL20AP0CX23 172 aaKnown RBP4.05□□□□□ -1.76
SSU72YNL222W RPL20BP0CX24 172 aaPredicted RBP4.05□□□□□ -1.76
SSU72YNL222W AMD1P15274 810 aaKnown RBP4.05□□□□□ -1.76
SSU72YNL222W SUI2P20459 304 aaKnown RBP4.05□□□□□ -1.76
SSU72YNL222W YCR022CP25620 114 aa4.05□□□□□ -1.76
SSU72YNL222W CIN4P39110 191 aa4.05□□□□□ -1.76
SSU72YNL222W RAD52P06778 471 aaKnown RBP4.04□□□□□ -1.76
SSU72YNL222W CBS2P14905 389 aa4.04□□□□□ -1.76
SSU72YNL222W EST1P17214 699 aaPredicted RBP4.04□□□□□ -1.76
SSU72YNL222W DPB3P27344 201 aa4.04□□□□□ -1.76
SSU72YNL222W TIF3P34167 436 aaKnown RBP4.04□□□□□ -1.76
SSU72YNL222W YHR210CP38893 341 aa4.04□□□□□ -1.76
SSU72YNL222W CCT6P39079 546 aa4.04□□□□□ -1.76
SSU72YNL222W YJR154WP47181 346 aa4.04□□□□□ -1.76
SSU72YNL222W BOR1P53838 576 aa4.04□□□□□ -1.76
SSU72YNL222W IPI3P53877 555 aa4.04□□□□□ -1.76
SSU72YNL222W SLD5Q03406 294 aa4.04□□□□□ -1.76
SSU72YNL222W SYO1Q07395 620 aa4.04□□□□□ -1.76
SSU72YNL222W YOR365CQ08844 703 aa4.04□□□□□ -1.76
SSU72YNL222W HUA2Q12134 243 aa4.04□□□□□ -1.76
SSU72YNL222W YLL056CQ12177 298 aa4.04□□□□□ -1.76
SSU72YNL222W YDL009CQ12210 107 aa4.04□□□□□ -1.76
SSU72YNL222W NOP58Q12499 511 aaKnown RBP4.04□□□□□ -1.76
SSU72YNL222W PEP4P07267 405 aaKnown RBP4.03□□□□□ -1.76
SSU72YNL222W SAN1P22470 610 aa4.03□□□□□ -1.76
SSU72YNL222W CAB3P36076 571 aa4.03□□□□□ -1.76
SSU72YNL222W PCA1P38360 1216 aa4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 263.4 ms