RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C YDL218WQ07629 317 aa2.32□□□□□ -2.04
VTI1YMR197C CTI6Q08923 506 aa2.32□□□□□ -2.04
VTI1YMR197C NUS1Q12063 375 aa2.32□□□□□ -2.04
VTI1YMR197C SWT1Q12104 458 aa2.32□□□□□ -2.04
VTI1YMR197C HSP42Q12329 375 aa2.32□□□□□ -2.04
VTI1YMR197C NOP58Q12499 511 aaKnown RBP2.32□□□□□ -2.04
VTI1YMR197C PAR32Q12515 295 aaKnown RBP2.32□□□□□ -2.04
VTI1YMR197C PCD1Q12524 340 aa2.32□□□□□ -2.04
VTI1YMR197C RPB2P08518 1224 aaKnown RBP2.31□□□□□ -2.04
VTI1YMR197C TY2A-LR1P0C2J4 438 aa2.31□□□□□ -2.04
VTI1YMR197C TY2A-FP0CX61 438 aa2.31□□□□□ -2.04
VTI1YMR197C TY2A-GR2P0CX62 438 aa2.31□□□□□ -2.04
VTI1YMR197C CBS1P14066 229 aa2.31□□□□□ -2.04
VTI1YMR197C CBS2P14905 389 aa2.31□□□□□ -2.04
VTI1YMR197C YCK1P23291 538 aa2.31□□□□□ -2.04
VTI1YMR197C CLB2P24869 491 aa2.31□□□□□ -2.04
VTI1YMR197C CLB3P24870 427 aa2.31□□□□□ -2.04
VTI1YMR197C TY2A-CP25383 438 aa2.31□□□□□ -2.04
VTI1YMR197C GID7P25569 745 aa2.31□□□□□ -2.04
VTI1YMR197C ADK2P26364 225 aa2.31□□□□□ -2.04
VTI1YMR197C APE3P37302 537 aaKnown RBP2.31□□□□□ -2.04
VTI1YMR197C KTR3P38130 404 aaPredicted RBP2.31□□□□□ -2.04
VTI1YMR197C MRX1P40050 688 aa2.31□□□□□ -2.04
VTI1YMR197C SSU1P41930 458 aa2.31□□□□□ -2.04
VTI1YMR197C CTK2P46962 323 aa2.31□□□□□ -2.04
VTI1YMR197C YJL055WP47044 245 aa2.31□□□□□ -2.04
VTI1YMR197C CSL4P53859 292 aaPredicted RBP2.31□□□□□ -2.04
VTI1YMR197C REG1Q00816 1014 aa2.31□□□□□ -2.04
VTI1YMR197C PEX25Q02969 394 aa2.31□□□□□ -2.04
VTI1YMR197C TY2A-DR2Q03483 438 aa2.31□□□□□ -2.04
VTI1YMR197C RAD30Q04049 632 aa2.31□□□□□ -2.04
VTI1YMR197C AIM32Q04689 311 aa2.31□□□□□ -2.04
VTI1YMR197C YLR345WQ06137 509 aa2.31□□□□□ -2.04
VTI1YMR197C ENT4Q07872 247 aa2.31□□□□□ -2.04
VTI1YMR197C NMD4Q12129 218 aa2.31□□□□□ -2.04
VTI1YMR197C TY2A-BQ12260 438 aa2.31□□□□□ -2.04
VTI1YMR197C TY2A-OR2Q12293 438 aa2.31□□□□□ -2.04
VTI1YMR197C TY2A-DR1Q12392 438 aa2.31□□□□□ -2.04
VTI1YMR197C TY2A-OR1Q12439 438 aa2.31□□□□□ -2.04
VTI1YMR197C TY2A-DR3Q99303 438 aa2.31□□□□□ -2.04
VTI1YMR197C ATP2P00830 511 aaKnown RBP2.3□□□□□ -2.04
VTI1YMR197C KRS1P15180 591 aaKnown RBP2.3□□□□□ -2.04
VTI1YMR197C SUI2P20459 304 aaKnown RBP2.3□□□□□ -2.04
VTI1YMR197C PUP2P32379 260 aa2.3□□□□□ -2.04
VTI1YMR197C STB6P36085 766 aa2.3□□□□□ -2.04
VTI1YMR197C REG2P38232 338 aa2.3□□□□□ -2.04
VTI1YMR197C ERG7P38604 731 aa2.3□□□□□ -2.04
VTI1YMR197C MDM31P38880 579 aa2.3□□□□□ -2.04
VTI1YMR197C TIF4631P39935 952 aaKnown RBP2.3□□□□□ -2.04
VTI1YMR197C FMP10P40098 244 aa2.3□□□□□ -2.04
VTI1YMR197C LCB2P40970 561 aa2.3□□□□□ -2.04
VTI1YMR197C DIM1P41819 318 aaKnown RBP2.3□□□□□ -2.04
VTI1YMR197C AAD10P47182 288 aa2.3□□□□□ -2.04
VTI1YMR197C VPS4P52917 437 aa2.3□□□□□ -2.04
VTI1YMR197C PIL1P53252 339 aaKnown RBP2.3□□□□□ -2.04
VTI1YMR197C NGL3Q03210 505 aa2.3□□□□□ -2.04
VTI1YMR197C PRP42Q03776 544 aaKnown RBP2.3□□□□□ -2.04
VTI1YMR197C GYL1Q04322 720 aa2.3□□□□□ -2.04
VTI1YMR197C ERB1Q04660 807 aaKnown RBP2.3□□□□□ -2.04
VTI1YMR197C CRN1Q06440 651 aa2.3□□□□□ -2.04
VTI1YMR197C RRP9Q06506 573 aaKnown RBP2.3□□□□□ -2.04
VTI1YMR197C CUE5Q08412 411 aaKnown RBP2.3□□□□□ -2.04
VTI1YMR197C RIM20Q12033 661 aa2.3□□□□□ -2.04
VTI1YMR197C NFI1Q12216 726 aa2.3□□□□□ -2.04
VTI1YMR197C PDH1Q12428 516 aaKnown RBP2.3□□□□□ -2.04
VTI1YMR197C GRX6Q12438 231 aa2.3□□□□□ -2.04
VTI1YMR197C ERG27Q12452 347 aaKnown RBP2.3□□□□□ -2.04
VTI1YMR197C YRF1-4O13559 1382 aa2.29□□□□□ -2.04
VTI1YMR197C MRS3P10566 314 aa2.29□□□□□ -2.04
VTI1YMR197C GLK1P17709 500 aaKnown RBP2.29□□□□□ -2.04
VTI1YMR197C REC107P21651 314 aa2.29□□□□□ -2.04
VTI1YMR197C ERG8P24521 451 aa2.29□□□□□ -2.04
VTI1YMR197C CLB1P24868 471 aa2.29□□□□□ -2.04
VTI1YMR197C SOF1P33750 489 aaKnown RBP2.29□□□□□ -2.04
VTI1YMR197C UBP11P36026 717 aa2.29□□□□□ -2.04
VTI1YMR197C MIC60P36112 540 aa2.29□□□□□ -2.04
VTI1YMR197C ALY1P36117 915 aa2.29□□□□□ -2.04
VTI1YMR197C NTR2P36118 322 aaPredicted RBP2.29□□□□□ -2.04
VTI1YMR197C GEX2P36173 615 aa2.29□□□□□ -2.04
VTI1YMR197C AAP1P37898 856 aaKnown RBP2.29□□□□□ -2.04
VTI1YMR197C SRO77P38163 1010 aa2.29□□□□□ -2.04
VTI1YMR197C SMF1P38925 575 aa2.29□□□□□ -2.04
VTI1YMR197C PSD1P39006 500 aa2.29□□□□□ -2.04
VTI1YMR197C FAA2P39518 744 aa2.29□□□□□ -2.04
VTI1YMR197C PFK26P40433 827 aaKnown RBP2.29□□□□□ -2.04
VTI1YMR197C YIL161WP40449 235 aaKnown RBP2.29□□□□□ -2.04
VTI1YMR197C MET18P40469 1032 aa2.29□□□□□ -2.04
VTI1YMR197C ZIM17P42844 174 aa2.29□□□□□ -2.04
VTI1YMR197C BUD27P43573 796 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
VTI1YMR197C FYV8P46949 817 aaKnown RBP2.29□□□□□ -2.04
VTI1YMR197C ASE1P50275 885 aa2.29□□□□□ -2.04
VTI1YMR197C SHE10P53075 577 aa2.29□□□□□ -2.04
VTI1YMR197C JJJ1P53863 590 aa2.29□□□□□ -2.04
VTI1YMR197C NCS2P53923 493 aaPredicted RBP2.29□□□□□ -2.04
VTI1YMR197C EOS1P53938 366 aa2.29□□□□□ -2.04
VTI1YMR197C OAZ1Q02803 292 aa2.29□□□□□ -2.04
VTI1YMR197C SKG3Q06315 1026 aa2.29□□□□□ -2.04
VTI1YMR197C VAM6Q07468 1049 aa2.29□□□□□ -2.04
VTI1YMR197C TMA16Q08687 178 aa2.29□□□□□ -2.04
VTI1YMR197C MDH1P17505 334 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms