RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	YOR387C	Q08910	206 aa		0.45	□□□□□ -2.34
RCO1	YMR075W	ATG9	Q12142	997 aa		0.45	□□□□□ -2.34
RCO1	YMR075W	INP53	Q12271	1107 aa		0.45	□□□□□ -2.34
RCO1	YMR075W	ARP6	Q12509	438 aa		0.45	□□□□□ -2.34
RCO1	YMR075W	YBL111C	Q3E7Y5	667 aa		0.45	□□□□□ -2.34
RCO1	YMR075W	YCL021W-A	Q96VH3	125 aa		0.45	□□□□□ -2.34
RCO1	YMR075W	APE1	P14904	514 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	FUN19	P28003	413 aa	Predicted RBP	0.44	□□□□□ -2.34
RCO1	YMR075W	GAC1	P28006	793 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	UBP11	P36026	717 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	ALY1	P36117	915 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	SPC34	P36131	295 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	ICS2	P38284	255 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	LAG1	P38703	411 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	OSH3	P38713	996 aa	Known RBP	0.44	□□□□□ -2.34
RCO1	YMR075W	NPR3	P38742	1146 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	RIC1	P40395	1056 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	WWM1	P43582	211 aa	Known RBP	0.44	□□□□□ -2.34
RCO1	YMR075W	SNG1	P46950	547 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	BUD32	P53323	261 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	ARC35	P53731	342 aa	Known RBP	0.44	□□□□□ -2.34
RCO1	YMR075W	CSL4	P53859	292 aa	Predicted RBP	0.44	□□□□□ -2.34
RCO1	YMR075W	INN1	P53901	409 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	ARK1	P53974	638 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	SKG3	Q06315	1026 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	PSK2	Q08217	1101 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	MUM3	Q08750	479 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	RRP6	Q12149	733 aa	Known RBP	0.44	□□□□□ -2.34
RCO1	YMR075W	VCX1	Q99385	411 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	SSM4	P40318	1319 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	RVS161	P25343	265 aa	Known RBP	0.44	□□□□□ -2.34
RCO1	YMR075W	RER1	P25560	188 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	YCL049C	P25577	312 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	YCR022C	P25620	114 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	NAM9	P27929	486 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	PAP1	P29468	568 aa	Known RBP	0.44	□□□□□ -2.34
RCO1	YMR075W	REC114	P32841	428 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	ALG8	P40351	577 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	BUD22	Q04347	519 aa	Known RBP	0.44	□□□□□ -2.34
RCO1	YMR075W	YMR018W	Q04364	514 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	IVY1	Q04934	453 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	VPS74	Q06385	345 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	TCO89	Q08921	799 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	LSP1	Q12230	341 aa	Known RBP	0.44	□□□□□ -2.34
RCO1	YMR075W	HRT3	Q12347	344 aa		0.44	□□□□□ -2.34
RCO1	YMR075W	BRR1	Q99177	341 aa	Predicted RBP	0.44	□□□□□ -2.34
RCO1	YMR075W	CCH1	P50077	2039 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	PUT2	P07275	575 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	CLN3	P13365	580 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	UBC1	P21734	215 aa	Known RBP	0.43	□□□□□ -2.34
RCO1	YMR075W	MSM1	P22438	575 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	ADH7	P25377	361 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	PUT3	P25502	979 aa	Predicted RBP	0.43	□□□□□ -2.34
RCO1	YMR075W	IMG1	P25626	169 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	DPB3	P27344	201 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	CRM1	P30822	1084 aa	Known RBP	0.43	□□□□□ -2.34
RCO1	YMR075W	CBF2	P32504	956 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	MRS6	P32864	603 aa	Known RBP	0.43	□□□□□ -2.34
RCO1	YMR075W	MRP4	P32902	394 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	SLC1	P33333	303 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	SNU114	P36048	1008 aa	Known RBP	0.43	□□□□□ -2.34
RCO1	YMR075W	YKL023W	P36103	277 aa	Known RBP	0.43	□□□□□ -2.34
RCO1	YMR075W	UTH1	P36135	365 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	GEX2	P36173	615 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	YBL029W	P38201	376 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	RFS1	P38234	210 aa	Known RBP	0.43	□□□□□ -2.34
RCO1	YMR075W	TSC10	P38342	320 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	ELO1	P39540	310 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	ACA1	P39970	489 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	KAP123	P40069	1113 aa	Known RBP	0.43	□□□□□ -2.34
RCO1	YMR075W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	0.43	□□□□□ -2.34	RIP-Chip
RCO1	YMR075W	RRT6	P53117	311 aa	Predicted RBP	0.43	□□□□□ -2.34
RCO1	YMR075W	LCL3	P53153	274 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	RPM2	Q02773	1202 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	SHR3	Q02774	210 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	PEX25	Q02969	394 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	PIR3	Q03180	325 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	IOC4	Q04213	475 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	PBA1	Q05778	276 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	MRPL51	Q06090	140 aa	Predicted RBP	0.43	□□□□□ -2.34
RCO1	YMR075W	RIX7	Q07844	837 aa	Known RBP	0.43	□□□□□ -2.34
RCO1	YMR075W	THI20	Q08224	551 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	LEU9	Q12166	604 aa	Known RBP	0.43	□□□□□ -2.34
RCO1	YMR075W	YDL009C	Q12210	107 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	SKM1	Q12469	655 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	SGS1	P35187	1447 aa		0.43	□□□□□ -2.34
RCO1	YMR075W	TOP1	P04786	769 aa		0.42	□□□□□ -2.34
RCO1	YMR075W	SRV2	P17555	526 aa	Known RBP	0.42	□□□□□ -2.34
RCO1	YMR075W	SGV1	P23293	657 aa	Known RBP	0.42	□□□□□ -2.34
RCO1	YMR075W	BOS1	P25385	244 aa		0.42	□□□□□ -2.34
RCO1	YMR075W	MRP20	P32387	263 aa		0.42	□□□□□ -2.34
RCO1	YMR075W	SAC6	P32599	642 aa	Known RBP	0.42	□□□□□ -2.34
RCO1	YMR075W	XRS2	P33301	854 aa		0.42	□□□□□ -2.34
RCO1	YMR075W	YKL100C	P34248	587 aa		0.42	□□□□□ -2.34
RCO1	YMR075W	TOM20	P35180	183 aa		0.42	□□□□□ -2.34
RCO1	YMR075W	RPL32	P38061	130 aa	Known RBP	0.42	□□□□□ -2.34
RCO1	YMR075W	SWD3	P38123	315 aa		0.42	□□□□□ -2.34
RCO1	YMR075W	MAL33	P38157	468 aa		0.42	□□□□□ -2.34
RCO1	YMR075W	ARP1	P38696	384 aa		0.42	□□□□□ -2.34
RCO1	YMR075W	UIP3	P39547	235 aa		0.42	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms