RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W APE1P14904 514 aa0.9□□□□□ -2.27
PRP39YML046W NCP1P16603 691 aaKnown RBP0.9□□□□□ -2.27
PRP39YML046W PET123P17558 318 aa0.9□□□□□ -2.27
PRP39YML046W PGS1P25578 521 aa0.9□□□□□ -2.27
PRP39YML046W GEX2P36173 615 aa0.9□□□□□ -2.27
PRP39YML046W MRPL36P36531 177 aa0.9□□□□□ -2.27
PRP39YML046W CHK1P38147 527 aa0.9□□□□□ -2.27
PRP39YML046W OSH3P38713 996 aaKnown RBP0.9□□□□□ -2.27
PRP39YML046W DPB11P47027 764 aaPredicted RBP0.9□□□□□ -2.27
PRP39YML046W TEP1P53916 434 aa0.9□□□□□ -2.27
PRP39YML046W TRS130Q03660 1102 aa0.9□□□□□ -2.27
PRP39YML046W EMI2Q04409 500 aaKnown RBP0.9□□□□□ -2.27
PRP39YML046W SYO1Q07395 620 aa0.9□□□□□ -2.27
PRP39YML046W YOL057WQ08225 711 aa0.9□□□□□ -2.27
PRP39YML046W ERG27Q12452 347 aaKnown RBP0.9□□□□□ -2.27
PRP39YML046W BUD4P47136 1447 aa0.89□□□□□ -2.27
PRP39YML046W SSK2P53599 1579 aa0.89□□□□□ -2.27
PRP39YML046W RPL40AP0CH08 128 aaKnown RBP0.89□□□□□ -2.27
PRP39YML046W RPL40BP0CH09 128 aaKnown RBP0.89□□□□□ -2.27
PRP39YML046W SRB5P32585 307 aa0.89□□□□□ -2.27
PRP39YML046W SDH3P33421 198 aa0.89□□□□□ -2.27
PRP39YML046W PIM1P36775 1133 aa0.89□□□□□ -2.27
PRP39YML046W DBP8P38719 431 aa0.89□□□□□ -2.27
PRP39YML046W ANS1P38832 159 aa0.89□□□□□ -2.27
PRP39YML046W CEG1Q01159 459 aaPredicted RBP0.89□□□□□ -2.27
PRP39YML046W YPL014WQ02606 381 aa0.89□□□□□ -2.27
PRP39YML046W YRM1Q12340 786 aa0.89□□□□□ -2.27
PRP39YML046W SEF1P34228 1148 aa0.88□□□□□ -2.27
PRP39YML046W KTR3P38130 404 aaPredicted RBP0.88□□□□□ -2.27
PRP39YML046W HAT2P39984 401 aa0.88□□□□□ -2.27
PRP39YML046W VPS27P40343 622 aaKnown RBP0.88□□□□□ -2.27
PRP39YML046W CHS6P40955 746 aa0.88□□□□□ -2.27
PRP39YML046W TAN1P53072 289 aaPredicted RBP0.88□□□□□ -2.27
PRP39YML046W STR3P53101 465 aaKnown RBP0.88□□□□□ -2.27
PRP39YML046W SMM1P53720 384 aaKnown RBP0.88□□□□□ -2.27
PRP39YML046W BSC5P53755 489 aa0.88□□□□□ -2.27
PRP39YML046W TSR1Q07381 788 aaKnown RBP0.88□□□□□ -2.27
PRP39YML046W YOL114CQ12322 202 aa0.88□□□□□ -2.27
PRP39YML046W PIF1P07271 859 aa0.88□□□□□ -2.27
PRP39YML046W CPR4P25334 318 aa0.88□□□□□ -2.27
PRP39YML046W FMP10P40098 244 aa0.88□□□□□ -2.27
PRP39YML046W PFK26P40433 827 aaKnown RBP0.88□□□□□ -2.27
PRP39YML046W CPR6P53691 371 aaKnown RBP0.88□□□□□ -2.27
PRP39YML046W DUG3P53871 357 aa0.88□□□□□ -2.27
PRP39YML046W RPC11Q04307 110 aaPredicted RBP0.88□□□□□ -2.27
PRP39YML046W MRPL51Q06090 140 aaPredicted RBP0.88□□□□□ -2.27
PRP39YML046W VPS74Q06385 345 aa0.88□□□□□ -2.27
PRP39YML046W ECM30Q06673 1274 aa0.88□□□□□ -2.27
PRP39YML046W TMA16Q08687 178 aa0.88□□□□□ -2.27
PRP39YML046W INP53Q12271 1107 aa0.88□□□□□ -2.27
PRP39YML046W TY1B-DR4Q07793 1604 aa0.88□□□□□ -2.27
PRP39YML046W CLB4P24871 460 aa0.87□□□□□ -2.27
PRP39YML046W ELP2P42935 788 aa0.87□□□□□ -2.27
PRP39YML046W ZDS2P54786 942 aa0.87□□□□□ -2.27
PRP39YML046W RHO4Q00246 291 aa0.87□□□□□ -2.27
PRP39YML046W PEX25Q02969 394 aa0.87□□□□□ -2.27
PRP39YML046W RSN1Q03516 953 aa0.87□□□□□ -2.27
PRP39YML046W SNT2P53127 1403 aa0.87□□□□□ -2.27
PRP39YML046W RKR1Q04781 1562 aa0.87□□□□□ -2.27
PRP39YML046W SSN2P38931 1420 aa0.86□□□□□ -2.27
PRP39YML046W PUT2P07275 575 aa0.86□□□□□ -2.27
PRP39YML046W SST2P11972 698 aaKnown RBP0.86□□□□□ -2.27
PRP39YML046W EXO70P19658 623 aa0.86□□□□□ -2.27
PRP39YML046W ENP1P38333 483 aaKnown RBP0.86□□□□□ -2.27
PRP39YML046W IRC15Q02733 499 aa0.86□□□□□ -2.27
PRP39YML046W EIS1Q05050 843 aaKnown RBP0.86□□□□□ -2.27
PRP39YML046W HRI1Q05905 244 aaKnown RBP0.86□□□□□ -2.27
PRP39YML046W HIM1Q06674 414 aa0.86□□□□□ -2.27
PRP39YML046W CHC1P22137 1653 aaKnown RBP0.86□□□□□ -2.27
PRP39YML046W TPK1P06244 397 aa0.86□□□□□ -2.27
PRP39YML046W HIP1P06775 603 aa0.86□□□□□ -2.27
PRP39YML046W PFK2P16862 959 aaKnown RBP RIP-Chip data0.86□□□□□ -2.27not detected
PRP39YML046W RCK2P38623 610 aa0.86□□□□□ -2.27
PRP39YML046W UIP3P39547 235 aa0.86□□□□□ -2.27
PRP39YML046W ALT2P52892 507 aa0.86□□□□□ -2.27
PRP39YML046W COG1P53079 417 aa0.86□□□□□ -2.27
PRP39YML046W TOF1P53840 1238 aa0.86□□□□□ -2.27
PRP39YML046W SHR3Q02774 210 aa0.86□□□□□ -2.27
PRP39YML046W ECM11Q04110 302 aa0.86□□□□□ -2.27
PRP39YML046W COX17Q12287 69 aa0.86□□□□□ -2.27
PRP39YML046W NKP1Q12493 238 aa0.86□□□□□ -2.27
PRP39YML046W TY2A-LR1P0C2J4 438 aa0.85□□□□□ -2.27
PRP39YML046W TY2A-FP0CX61 438 aa0.85□□□□□ -2.27
PRP39YML046W TY2A-GR2P0CX62 438 aa0.85□□□□□ -2.27
PRP39YML046W TY2A-CP25383 438 aa0.85□□□□□ -2.27
PRP39YML046W VID24P38263 362 aa0.85□□□□□ -2.27
PRP39YML046W PYK2P52489 506 aaKnown RBP0.85□□□□□ -2.27
PRP39YML046W CAF40P53829 373 aa0.85□□□□□ -2.27
PRP39YML046W CSL4P53859 292 aaPredicted RBP0.85□□□□□ -2.27
PRP39YML046W RSM23Q01163 450 aa0.85□□□□□ -2.27
PRP39YML046W TY2A-DR2Q03483 438 aa0.85□□□□□ -2.27
PRP39YML046W VHS1Q03785 461 aa0.85□□□□□ -2.27
PRP39YML046W YPQ1Q12010 308 aa0.85□□□□□ -2.27
PRP39YML046W ATG9Q12142 997 aa0.85□□□□□ -2.27
PRP39YML046W TY2A-BQ12260 438 aa0.85□□□□□ -2.27
PRP39YML046W TY2A-OR2Q12293 438 aa0.85□□□□□ -2.27
PRP39YML046W TY2A-DR1Q12392 438 aa0.85□□□□□ -2.27
PRP39YML046W TY2A-OR1Q12439 438 aa0.85□□□□□ -2.27
PRP39YML046W TY2A-DR3Q99303 438 aa0.85□□□□□ -2.27
PRP39YML046W YBR085C-AO43137 85 aa0.84□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 100.3 ms