RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C BIO3P50277 480 aa2.02□□□□□ -2.09
RTT101YJL047C ARI1P53111 347 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C PIB2P53191 635 aa2.02□□□□□ -2.09
RTT101YJL047C TIM21P53220 239 aa2.02□□□□□ -2.09
RTT101YJL047C CAF130P53280 1122 aaPredicted RBP2.02□□□□□ -2.09
RTT101YJL047C PRM1P53835 661 aa2.02□□□□□ -2.09
RTT101YJL047C YAT1P80235 687 aa2.02□□□□□ -2.09
RTT101YJL047C SKO1Q02100 647 aa2.02□□□□□ -2.09
RTT101YJL047C YMR160WQ03823 816 aa2.02□□□□□ -2.09
RTT101YJL047C ADE13Q05911 482 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C CRN1Q06440 651 aa2.02□□□□□ -2.09
RTT101YJL047C YFT2Q06676 274 aa2.02□□□□□ -2.09
RTT101YJL047C YLL007CQ07799 665 aa2.02□□□□□ -2.09
RTT101YJL047C AEP3Q12089 606 aa2.02□□□□□ -2.09
RTT101YJL047C MDM20Q12387 796 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C CFT1Q06632 1357 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C CHS2P14180 963 aa2.02□□□□□ -2.09
RTT101YJL047C CLC1P17891 233 aa2.02□□□□□ -2.09
RTT101YJL047C PRE10P21242 288 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
RTT101YJL047C VPS34P22543 875 aa2.02□□□□□ -2.09
RTT101YJL047C VMA16P23968 213 aa2.02□□□□□ -2.09
RTT101YJL047C BOS1P25385 244 aa2.02□□□□□ -2.09
RTT101YJL047C YCL068CP25593 260 aa2.02□□□□□ -2.09
RTT101YJL047C NDI1P32340 513 aa2.02□□□□□ -2.09
RTT101YJL047C APT2P36973 181 aa2.02□□□□□ -2.09
RTT101YJL047C GDT1P38301 280 aaPredicted RBP2.02□□□□□ -2.09
RTT101YJL047C YNG2P38806 282 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C KEL1P38853 1164 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C PEX7P39108 375 aa2.02□□□□□ -2.09
RTT101YJL047C ECM1P39715 212 aa2.02□□□□□ -2.09
RTT101YJL047C YIR014WP40570 242 aa2.02□□□□□ -2.09
RTT101YJL047C GCN20P43535 752 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C NMD5P46970 1048 aa2.02□□□□□ -2.09
RTT101YJL047C RPA34P47006 233 aaPredicted RBP2.02□□□□□ -2.09
RTT101YJL047C MCM6P53091 1017 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C MND1P53102 219 aa2.02□□□□□ -2.09
RTT101YJL047C BUD9P53226 547 aa2.02□□□□□ -2.09
RTT101YJL047C RTT102P53330 157 aa2.02□□□□□ -2.09
RTT101YJL047C OCA2P53949 197 aa2.02□□□□□ -2.09
RTT101YJL047C HEF3P53978 1044 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C PNG1Q02890 363 aa2.02□□□□□ -2.09
RTT101YJL047C URC2Q04411 772 aa2.02□□□□□ -2.09
RTT101YJL047C CRT10Q08226 957 aa2.02□□□□□ -2.09
RTT101YJL047C ETT1Q08421 412 aaKnown RBP2.02□□□□□ -2.09
RTT101YJL047C YOR352WQ08816 343 aa2.02□□□□□ -2.09
RTT101YJL047C NTO1Q12311 748 aa2.02□□□□□ -2.09
RTT101YJL047C YDL007C-AQ2V2Q0 85 aa2.02□□□□□ -2.09
RTT101YJL047C RTC1Q08281 1341 aa2.02□□□□□ -2.09
RTT101YJL047C GAL3P13045 520 aa2.01□□□□□ -2.09
RTT101YJL047C KIN2P13186 1147 aaKnown RBP2.01□□□□□ -2.09
RTT101YJL047C UGA1P17649 471 aa2.01□□□□□ -2.09
RTT101YJL047C PEX1P24004 1043 aa2.01□□□□□ -2.09
RTT101YJL047C ADH7P25377 361 aa2.01□□□□□ -2.09
RTT101YJL047C MGR1P25573 417 aa2.01□□□□□ -2.09
RTT101YJL047C RDS1P25611 832 aa2.01□□□□□ -2.09
RTT101YJL047C HSP104P31539 908 aaKnown RBP2.01□□□□□ -2.09
RTT101YJL047C ERG1P32476 496 aaKnown RBP2.01□□□□□ -2.09
RTT101YJL047C BCS1P32839 456 aa2.01□□□□□ -2.09
RTT101YJL047C PRS1P32895 427 aaKnown RBP2.01□□□□□ -2.09
RTT101YJL047C NTR2P36118 322 aaPredicted RBP2.01□□□□□ -2.09
RTT101YJL047C MRPL7P36519 292 aa2.01□□□□□ -2.09
RTT101YJL047C MCX1P38323 520 aaPredicted RBP2.01□□□□□ -2.09
RTT101YJL047C IMD2P38697 523 aaKnown RBP2.01□□□□□ -2.09
RTT101YJL047C BUR6P40096 142 aa2.01□□□□□ -2.09
RTT101YJL047C URM1P40554 99 aaPredicted RBP2.01□□□□□ -2.09
RTT101YJL047C CIN1P40987 1014 aa2.01□□□□□ -2.09
RTT101YJL047C MMM1P41800 426 aa2.01□□□□□ -2.09
RTT101YJL047C AIM22P47051 409 aa2.01□□□□□ -2.09
RTT101YJL047C COS5P47187 383 aa2.01□□□□□ -2.09
RTT101YJL047C YNL144CP53907 740 aa2.01□□□□□ -2.09
RTT101YJL047C EFM6P53970 246 aa2.01□□□□□ -2.09
RTT101YJL047C SPO19Q03029 223 aa2.01□□□□□ -2.09
RTT101YJL047C YMR130WQ04223 302 aa2.01□□□□□ -2.09
RTT101YJL047C RTN1Q04947 295 aaKnown RBP2.01□□□□□ -2.09
RTT101YJL047C COQ9Q05779 260 aa2.01□□□□□ -2.09
RTT101YJL047C SSQ1Q05931 657 aaPredicted RBP2.01□□□□□ -2.09
RTT101YJL047C DCS1Q06151 350 aa2.01□□□□□ -2.09
RTT101YJL047C YLR173WQ06247 608 aa2.01□□□□□ -2.09
RTT101YJL047C COS7Q07788 383 aa2.01□□□□□ -2.09
RTT101YJL047C AHC1Q12433 566 aa2.01□□□□□ -2.09
RTT101YJL047C DFG16Q99234 619 aa2.01□□□□□ -2.09
RTT101YJL047C IKI3Q06706 1349 aaKnown RBP2.01□□□□□ -2.09
RTT101YJL047C YPR089WO13585 888 aa2.01□□□□□ -2.09
RTT101YJL047C COX3P00420 269 aa2.01□□□□□ -2.09
RTT101YJL047C CAR1P00812 333 aaKnown RBP2.01□□□□□ -2.09
RTT101YJL047C CDC36P06100 191 aaPredicted RBP2.01□□□□□ -2.09
RTT101YJL047C RSR1P13856 272 aa2.01□□□□□ -2.09
RTT101YJL047C DAL81P21657 970 aa2.01□□□□□ -2.09
RTT101YJL047C SEC15P22224 910 aa2.01□□□□□ -2.09
RTT101YJL047C CDC20P26309 610 aa2.01□□□□□ -2.09
RTT101YJL047C SRB4P32569 687 aa2.01□□□□□ -2.09
RTT101YJL047C SUA5P32579 426 aa2.01□□□□□ -2.09
RTT101YJL047C CBF5P33322 483 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
RTT101YJL047C KKQ8P36004 724 aa2.01□□□□□ -2.09
RTT101YJL047C CUE2P36075 443 aaKnown RBP2.01□□□□□ -2.09
RTT101YJL047C RTR1P40084 226 aaPredicted RBP2.01□□□□□ -2.09
RTT101YJL047C VHS2P40463 436 aa2.01□□□□□ -2.09
RTT101YJL047C MSS2P40990 351 aa2.01□□□□□ -2.09
RTT101YJL047C YFL066CP43538 392 aa2.01□□□□□ -2.09
RTT101YJL047C CTH1P47976 325 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms