RNA–Protein interactions for RNA: YIR005W

IST3, Transcript of Component of the U2 snRNP, yeast

Gene IST3, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IST3	YIR005W	RTT109	Q07794	436 aa		3.13	□□□□□ -1.91
IST3	YIR005W	TEN1	Q07921	160 aa		3.13	□□□□□ -1.91
IST3	YIR005W	BUD5	P25300	642 aa	Predicted RBP	3.12	□□□□□ -1.91
IST3	YIR005W	ADH7	P25377	361 aa		3.12	□□□□□ -1.91
IST3	YIR005W	CBF2	P32504	956 aa		3.12	□□□□□ -1.91
IST3	YIR005W	YME1	P32795	747 aa		3.12	□□□□□ -1.91
IST3	YIR005W	MTR2	P34232	184 aa	Known RBP	3.12	□□□□□ -1.91
IST3	YIR005W	YKL100C	P34248	587 aa		3.12	□□□□□ -1.91
IST3	YIR005W	RRT6	P53117	311 aa	Predicted RBP	3.12	□□□□□ -1.91
IST3	YIR005W	PIL1	P53252	339 aa	Known RBP	3.12	□□□□□ -1.91
IST3	YIR005W	DUG3	P53871	357 aa		3.12	□□□□□ -1.91
IST3	YIR005W	YOR387C	Q08910	206 aa		3.12	□□□□□ -1.91
IST3	YIR005W	SUP35	P05453	685 aa	Known RBP	3.11	□□□□□ -1.91
IST3	YIR005W	LPD1	P09624	499 aa	Known RBP	3.11	□□□□□ -1.91
IST3	YIR005W	PEP5	P12868	1029 aa		3.11	□□□□□ -1.91
IST3	YIR005W	PWP1	P21304	576 aa	Known RBP	3.11	□□□□□ -1.91
IST3	YIR005W	SGV1	P23293	657 aa	Known RBP	3.11	□□□□□ -1.91
IST3	YIR005W	RNA14	P25298	677 aa	Known RBP	3.11	□□□□□ -1.91
IST3	YIR005W	YCR022C	P25620	114 aa		3.11	□□□□□ -1.91
IST3	YIR005W	SPR1	P32603	445 aa		3.11	□□□□□ -1.91
IST3	YIR005W	MSN2	P33748	704 aa		3.11	□□□□□ -1.91
IST3	YIR005W	YKL023W	P36103	277 aa	Known RBP	3.11	□□□□□ -1.91
IST3	YIR005W	RFS1	P38234	210 aa	Known RBP	3.11	□□□□□ -1.91
IST3	YIR005W	YGR210C	P42942	411 aa		3.11	□□□□□ -1.91
IST3	YIR005W	MRPL51	Q06090	140 aa	Predicted RBP	3.11	□□□□□ -1.91
IST3	YIR005W	MHR1	Q06630	226 aa		3.11	□□□□□ -1.91
IST3	YIR005W	SOD1	P00445	154 aa	Known RBP	3.1	□□□□□ -1.91
IST3	YIR005W	VMA16	P23968	213 aa		3.1	□□□□□ -1.91
IST3	YIR005W	NAM9	P27929	486 aa		3.1	□□□□□ -1.91
IST3	YIR005W	FUN19	P28003	413 aa	Predicted RBP	3.1	□□□□□ -1.91
IST3	YIR005W	DEG1	P31115	442 aa	Known RBP	3.1	□□□□□ -1.91
IST3	YIR005W	MRP20	P32387	263 aa		3.1	□□□□□ -1.91
IST3	YIR005W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
IST3	YIR005W	YBL059W	P34224	193 aa		3.1	□□□□□ -1.91
IST3	YIR005W	ALY1	P36117	915 aa		3.1	□□□□□ -1.91
IST3	YIR005W	KTR3	P38130	404 aa	Predicted RBP	3.1	□□□□□ -1.91
IST3	YIR005W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
IST3	YIR005W	SHR3	Q02774	210 aa		3.1	□□□□□ -1.91
IST3	YIR005W	TMC1	Q08422	150 aa	Predicted RBP	3.1	□□□□□ -1.91
IST3	YIR005W	APA1	P16550	321 aa	Known RBP	3.09	□□□□□ -1.91
IST3	YIR005W	ISY1	P21374	235 aa	Predicted RBP	3.09	□□□□□ -1.91
IST3	YIR005W	YCR007C	P25354	239 aa		3.09	□□□□□ -1.91
IST3	YIR005W	SGF29	P25554	259 aa		3.09	□□□□□ -1.91
IST3	YIR005W	FRE1	P32791	686 aa		3.09	□□□□□ -1.91
IST3	YIR005W	SNG1	P46950	547 aa		3.09	□□□□□ -1.91
IST3	YIR005W	VPS74	Q06385	345 aa		3.09	□□□□□ -1.91
IST3	YIR005W	CTF3	Q12748	733 aa		3.09	□□□□□ -1.91
IST3	YIR005W	NAT1	P12945	854 aa	Known RBP	3.08	□□□□□ -1.92
IST3	YIR005W	YIM1	P28625	365 aa		3.08	□□□□□ -1.92
IST3	YIR005W	PRS1	P32895	427 aa	Known RBP	3.08	□□□□□ -1.92
IST3	YIR005W	NDT80	P38830	627 aa		3.08	□□□□□ -1.92
IST3	YIR005W	HAT2	P39984	401 aa		3.08	□□□□□ -1.92
IST3	YIR005W	YJR154W	P47181	346 aa		3.08	□□□□□ -1.92
IST3	YIR005W	UBX4	P54730	416 aa		3.08	□□□□□ -1.92
IST3	YIR005W	HHF1	P02309	103 aa	Known RBP	3.07	□□□□□ -1.92
IST3	YIR005W	AAD10	P47182	288 aa		3.07	□□□□□ -1.92
IST3	YIR005W	YGR127W	P53275	312 aa		3.07	□□□□□ -1.92
IST3	YIR005W	SLD5	Q03406	294 aa		3.07	□□□□□ -1.92
IST3	YIR005W	DPB4	Q04603	196 aa	Known RBP	3.07	□□□□□ -1.92
IST3	YIR005W	RRN11	Q04712	507 aa		3.07	□□□□□ -1.92
IST3	YIR005W	LSP1	Q12230	341 aa	Known RBP	3.07	□□□□□ -1.92
IST3	YIR005W	ERV2	Q12284	196 aa		3.07	□□□□□ -1.92
IST3	YIR005W	CPR1	P14832	162 aa	Known RBP	3.06	□□□□□ -1.92
IST3	YIR005W	SUI2	P20459	304 aa	Known RBP	3.06	□□□□□ -1.92
IST3	YIR005W	ARO2	P28777	376 aa	Known RBP	3.06	□□□□□ -1.92
IST3	YIR005W	YBL055C	P34220	418 aa	Predicted RBP	3.06	□□□□□ -1.92
IST3	YIR005W	PTR3	P43606	678 aa		3.06	□□□□□ -1.92
IST3	YIR005W	BUD32	P53323	261 aa		3.06	□□□□□ -1.92
IST3	YIR005W	IRC15	Q02733	499 aa		3.06	□□□□□ -1.92
IST3	YIR005W	VID22	Q05934	901 aa		3.06	□□□□□ -1.92
IST3	YIR005W	TRM8	Q12009	286 aa		3.06	□□□□□ -1.92
IST3	YIR005W	NBP2	Q12163	236 aa		3.06	□□□□□ -1.92
IST3	YIR005W	EXO70	P19658	623 aa		3.05	□□□□□ -1.92
IST3	YIR005W	BOS1	P25385	244 aa		3.05	□□□□□ -1.92
IST3	YIR005W	SYN8	P31377	255 aa		3.05	□□□□□ -1.92
IST3	YIR005W	NUP133	P36161	1157 aa		3.05	□□□□□ -1.92
IST3	YIR005W	TIS11	P47977	285 aa		3.05	□□□□□ -1.92
IST3	YIR005W	YLR152C	P54072	576 aa		3.05	□□□□□ -1.92
IST3	YIR005W	ELP3	Q02908	557 aa	Known RBP	3.05	□□□□□ -1.92
IST3	YIR005W	IVY1	Q04934	453 aa		3.05	□□□□□ -1.92
IST3	YIR005W	PBA1	Q05778	276 aa		3.05	□□□□□ -1.92
IST3	YIR005W	SNF1	P06782	633 aa	Known RBP	3.04	□□□□□ -1.92
IST3	YIR005W	PUP3	P25451	205 aa	Known RBP	3.04	□□□□□ -1.92
IST3	YIR005W	ELP2	P42935	788 aa		3.04	□□□□□ -1.92
IST3	YIR005W	FAR3	P46671	204 aa		3.04	□□□□□ -1.92
IST3	YIR005W	BNA1	P47096	177 aa		3.04	□□□□□ -1.92
IST3	YIR005W	YGR126W	P53274	230 aa		3.04	□□□□□ -1.92
IST3	YIR005W	RTS3	P53289	263 aa		3.04	□□□□□ -1.92
IST3	YIR005W	APJ1	P53940	528 aa		3.04	□□□□□ -1.92
IST3	YIR005W	EFM6	P53970	246 aa		3.04	□□□□□ -1.92
IST3	YIR005W	RIX7	Q07844	837 aa	Known RBP	3.04	□□□□□ -1.92
IST3	YIR005W	RRG7	Q08774	242 aa	Predicted RBP	3.04	□□□□□ -1.92
IST3	YIR005W	TMS1	Q12116	473 aa		3.04	□□□□□ -1.92
IST3	YIR005W	YHR210C	P38893	341 aa		3.03	□□□□□ -1.92
IST3	YIR005W	DSD1	P53095	428 aa		3.03	□□□□□ -1.92
IST3	YIR005W	YOR365C	Q08844	703 aa		3.03	□□□□□ -1.92
IST3	YIR005W	HRT3	Q12347	344 aa		3.03	□□□□□ -1.92
IST3	YIR005W	HEM15	P16622	393 aa		3.02	□□□□□ -1.93
IST3	YIR005W	IMG1	P25626	169 aa		3.02	□□□□□ -1.93
IST3	YIR005W	DBF20	P32328	564 aa		3.02	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms