RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C LCL3P53153 274 aa3.35□□□□□ -1.87
PGD1YGL025C DUO1P53168 247 aaKnown RBP3.35□□□□□ -1.87
PGD1YGL025C DRN1P53255 507 aaKnown RBP3.35□□□□□ -1.87
PGD1YGL025C YGR127WP53275 312 aa3.35□□□□□ -1.87
PGD1YGL025C BUD32P53323 261 aa3.35□□□□□ -1.87
PGD1YGL025C YML037CQ03703 340 aa3.35□□□□□ -1.87
PGD1YGL025C PEP5P12868 1029 aa3.34□□□□□ -1.87
PGD1YGL025C SEC62P21825 274 aa3.34□□□□□ -1.87
PGD1YGL025C ICS2P38284 255 aa3.34□□□□□ -1.87
PGD1YGL025C MDM31P38880 579 aa3.34□□□□□ -1.87
PGD1YGL025C CCT6P39079 546 aa3.34□□□□□ -1.87
PGD1YGL025C RPR2P40571 144 aa3.34□□□□□ -1.87
PGD1YGL025C SNG1P46950 547 aa3.34□□□□□ -1.87
PGD1YGL025C YDL186WP48568 277 aa3.34□□□□□ -1.87
PGD1YGL025C DSD1P53095 428 aa3.34□□□□□ -1.87
PGD1YGL025C DUG3P53871 357 aa3.34□□□□□ -1.87
PGD1YGL025C NGL3Q03210 505 aa3.34□□□□□ -1.87
PGD1YGL025C BUD22Q04347 519 aaKnown RBP3.34□□□□□ -1.87
PGD1YGL025C ERP1Q05359 219 aaKnown RBP3.34□□□□□ -1.87
PGD1YGL025C CDC45Q08032 650 aa3.34□□□□□ -1.87
PGD1YGL025C PPT2Q12036 173 aa3.34□□□□□ -1.87
PGD1YGL025C YBR126W-AQ8TGU7 68 aa3.34□□□□□ -1.87
PGD1YGL025C MRP13P12686 339 aa3.33□□□□□ -1.88
PGD1YGL025C APE1P14904 514 aa3.33□□□□□ -1.88
PGD1YGL025C AMD1P15274 810 aaKnown RBP3.33□□□□□ -1.88
PGD1YGL025C SGF29P25554 259 aa3.33□□□□□ -1.88
PGD1YGL025C NDC1P32500 655 aa3.33□□□□□ -1.88
PGD1YGL025C TIF3P34167 436 aaKnown RBP3.33□□□□□ -1.88
PGD1YGL025C UBP11P36026 717 aa3.33□□□□□ -1.88
PGD1YGL025C YBL029WP38201 376 aa3.33□□□□□ -1.88
PGD1YGL025C OSH3P38713 996 aaKnown RBP3.33□□□□□ -1.88
PGD1YGL025C YHR218WP38899 603 aa3.33□□□□□ -1.88
PGD1YGL025C VPS52P39904 641 aa3.33□□□□□ -1.88
PGD1YGL025C CSM2P40465 213 aa3.33□□□□□ -1.88
PGD1YGL025C RTT101P47050 842 aa3.33□□□□□ -1.88
PGD1YGL025C COS10P52924 374 aa3.33□□□□□ -1.88
PGD1YGL025C YGL082WP53155 381 aa3.33□□□□□ -1.88
PGD1YGL025C SHR3Q02774 210 aa3.33□□□□□ -1.88
PGD1YGL025C GLO2Q05584 274 aa3.33□□□□□ -1.88
PGD1YGL025C YOR365CQ08844 703 aa3.33□□□□□ -1.88
PGD1YGL025C PEP4P07267 405 aaKnown RBP3.32□□□□□ -1.88
PGD1YGL025C SPC110P32380 944 aa3.32□□□□□ -1.88
PGD1YGL025C YKL023WP36103 277 aaKnown RBP3.32□□□□□ -1.88
PGD1YGL025C RPH1P39956 796 aa3.32□□□□□ -1.88
PGD1YGL025C YFR016CP43597 1233 aaKnown RBP3.32□□□□□ -1.88
PGD1YGL025C RPC11Q04307 110 aaPredicted RBP3.32□□□□□ -1.88
PGD1YGL025C SYO1Q07395 620 aa3.32□□□□□ -1.88
PGD1YGL025C SDH5Q08230 162 aa3.32□□□□□ -1.88
PGD1YGL025C NOP58Q12499 511 aaKnown RBP3.32□□□□□ -1.88
PGD1YGL025C GDH1P07262 454 aaKnown RBP3.31□□□□□ -1.88
PGD1YGL025C MCK1P21965 375 aaKnown RBP3.31□□□□□ -1.88
PGD1YGL025C YCR022CP25620 114 aa3.31□□□□□ -1.88
PGD1YGL025C CPR3P25719 182 aa3.31□□□□□ -1.88
PGD1YGL025C BUD14P27637 709 aa3.31□□□□□ -1.88
PGD1YGL025C PTR2P32901 601 aa3.31□□□□□ -1.88
PGD1YGL025C YHR210CP38893 341 aa3.31□□□□□ -1.88
PGD1YGL025C CIN4P39110 191 aa3.31□□□□□ -1.88
PGD1YGL025C VID27P40157 782 aa3.31□□□□□ -1.88
PGD1YGL025C ROK1P45818 564 aaPredicted RBP3.31□□□□□ -1.88
PGD1YGL025C ALT2P52892 507 aa3.31□□□□□ -1.88
PGD1YGL025C YGR126WP53274 230 aa3.31□□□□□ -1.88
PGD1YGL025C SVL3Q03088 825 aaKnown RBP3.31□□□□□ -1.88
PGD1YGL025C RLI1Q03195 608 aaKnown RBP3.31□□□□□ -1.88
PGD1YGL025C BNA5Q05979 453 aa3.31□□□□□ -1.88
PGD1YGL025C YDL057WQ07379 328 aa3.31□□□□□ -1.88
PGD1YGL025C FMP40Q08968 688 aaPredicted RBP3.31□□□□□ -1.88
PGD1YGL025C YDR056CQ12025 205 aa3.31□□□□□ -1.88
PGD1YGL025C NMD4Q12129 218 aa3.31□□□□□ -1.88
PGD1YGL025C AYT1Q12226 474 aa3.31□□□□□ -1.88
PGD1YGL025C SUC2P00724 532 aa3.3□□□□□ -1.88
PGD1YGL025C RAD52P06778 471 aaKnown RBP3.3□□□□□ -1.88
PGD1YGL025C MTF1P14908 341 aaKnown RBP3.3□□□□□ -1.88
PGD1YGL025C ART10P18634 518 aaKnown RBP3.3□□□□□ -1.88
PGD1YGL025C ELO2P25358 347 aa3.3□□□□□ -1.88
PGD1YGL025C AGA1P32323 725 aa3.3□□□□□ -1.88
PGD1YGL025C PAH1P32567 862 aa3.3□□□□□ -1.88
PGD1YGL025C YNK1P36010 153 aaKnown RBP3.3□□□□□ -1.88
PGD1YGL025C MTC4P38335 694 aaKnown RBP3.3□□□□□ -1.88
PGD1YGL025C FLC2P39719 783 aa3.3□□□□□ -1.88
PGD1YGL025C YJL213WP40896 331 aa3.3□□□□□ -1.88
PGD1YGL025C SCD6P45978 349 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
PGD1YGL025C YJR154WP47181 346 aa3.3□□□□□ -1.88
PGD1YGL025C SLD5Q03406 294 aa3.3□□□□□ -1.88
PGD1YGL025C YEH1Q07804 573 aa3.3□□□□□ -1.88
PGD1YGL025C TLG2Q08144 397 aa3.3□□□□□ -1.88
PGD1YGL025C HUA2Q12134 243 aa3.3□□□□□ -1.88
PGD1YGL025C SET6Q12529 373 aa3.3□□□□□ -1.88
PGD1YGL025C SGS1P35187 1447 aa3.29□□□□□ -1.88
PGD1YGL025C SEM1O94742 89 aa3.29□□□□□ -1.88
PGD1YGL025C SAC6P32599 642 aaKnown RBP3.29□□□□□ -1.88
PGD1YGL025C YOX1P34161 385 aa3.29□□□□□ -1.88
PGD1YGL025C AFG3P39925 761 aa3.29□□□□□ -1.88
PGD1YGL025C NOP16P40007 231 aaKnown RBP3.29□□□□□ -1.88
PGD1YGL025C UPF3P48412 387 aaKnown RBP3.29□□□□□ -1.88
PGD1YGL025C BOR1P53838 576 aa3.29□□□□□ -1.88
PGD1YGL025C COQ9Q05779 260 aa3.29□□□□□ -1.88
PGD1YGL025C YDL009CQ12210 107 aa3.29□□□□□ -1.88
PGD1YGL025C HSH49Q99181 213 aaPredicted RBP3.29□□□□□ -1.88
PGD1YGL025C YPT6Q99260 215 aa3.29□□□□□ -1.88
PGD1YGL025C EST1P17214 699 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms