RNA–Protein interactions for RNA: YER144C

UBP5, Transcript of Putative ubiquitin-specific protease, yeastyeast

Gene UBP5, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP5YER144C VPS38Q05919 439 aa3.33□□□□□ -1.88
UBP5YER144C TSR1Q07381 788 aaKnown RBP3.33□□□□□ -1.88
UBP5YER144C GPN2Q08726 347 aaPredicted RBP3.33□□□□□ -1.88
UBP5YER144C SMF3Q12078 473 aaPredicted RBP3.33□□□□□ -1.88
UBP5YER144C ATG9Q12142 997 aa3.33□□□□□ -1.88
UBP5YER144C YDL177CQ12257 170 aa3.33□□□□□ -1.88
UBP5YER144C ZRT2Q12436 422 aa3.33□□□□□ -1.88
UBP5YER144C PAR32Q12515 295 aaKnown RBP3.33□□□□□ -1.88
UBP5YER144C YBR126W-AQ8TGU7 68 aa3.33□□□□□ -1.88
UBP5YER144C TPK1P06244 397 aa3.33□□□□□ -1.88
UBP5YER144C RAD3P06839 778 aa3.33□□□□□ -1.88
UBP5YER144C PPR1P07272 904 aaPredicted RBP3.33□□□□□ -1.88
UBP5YER144C DCG1P32460 244 aa3.33□□□□□ -1.88
UBP5YER144C CNS1P33313 385 aa3.33□□□□□ -1.88
UBP5YER144C TRM2P33753 639 aa3.33□□□□□ -1.88
UBP5YER144C STB6P36085 766 aa3.33□□□□□ -1.88
UBP5YER144C VID24P38263 362 aa3.33□□□□□ -1.88
UBP5YER144C YHR054CP38780 354 aa3.33□□□□□ -1.88
UBP5YER144C SLZ1P40167 298 aa3.33□□□□□ -1.88
UBP5YER144C HSH155P49955 971 aaKnown RBP3.33□□□□□ -1.88
UBP5YER144C SHE4P51534 789 aa3.33□□□□□ -1.88
UBP5YER144C IMO32P53219 342 aa3.33□□□□□ -1.88
UBP5YER144C FDC1Q03034 503 aa3.33□□□□□ -1.88
UBP5YER144C SSY1Q03770 852 aa3.33□□□□□ -1.88
UBP5YER144C YMR111CQ04461 462 aaPredicted RBP3.33□□□□□ -1.88
UBP5YER144C REX3Q12090 404 aa3.33□□□□□ -1.88
UBP5YER144C SKS1Q12505 502 aa3.33□□□□□ -1.88
UBP5YER144C YDR524C-BQ3E6R4 66 aa3.33□□□□□ -1.88
UBP5YER144C YIL002W-AQ3E7Z5 69 aa3.33□□□□□ -1.88
UBP5YER144C RIF1P29539 1916 aa3.33□□□□□ -1.88
UBP5YER144C CYC1P00044 109 aaPredicted RBP3.32□□□□□ -1.88
UBP5YER144C COX4P04037 155 aa3.32□□□□□ -1.88
UBP5YER144C RPS3P05750 240 aaKnown RBP3.32□□□□□ -1.88
UBP5YER144C PET122P10355 254 aa3.32□□□□□ -1.88
UBP5YER144C VPS33P20795 691 aa3.32□□□□□ -1.88
UBP5YER144C SED4P25365 1065 aa3.32□□□□□ -1.88
UBP5YER144C YCR061WP25639 631 aa3.32□□□□□ -1.88
UBP5YER144C HXT1P32465 570 aa3.32□□□□□ -1.88
UBP5YER144C YKL100CP34248 587 aa3.32□□□□□ -1.88
UBP5YER144C HEL1P36113 551 aa3.32□□□□□ -1.88
UBP5YER144C UME6P39001 836 aa3.32□□□□□ -1.88
UBP5YER144C JHD1P40034 492 aa3.32□□□□□ -1.88
UBP5YER144C SHQ1P40486 507 aaPredicted RBP3.32□□□□□ -1.88
UBP5YER144C GTS1P40956 396 aa3.32□□□□□ -1.88
UBP5YER144C IAH1P41734 238 aa3.32□□□□□ -1.88
UBP5YER144C LAM5P43560 674 aa3.32□□□□□ -1.88
UBP5YER144C BUL1P48524 976 aa3.32□□□□□ -1.88
UBP5YER144C ATP22P50273 684 aaPredicted RBP3.32□□□□□ -1.88
UBP5YER144C FOL2P51601 243 aaKnown RBP3.32□□□□□ -1.88
UBP5YER144C MUK1Q02866 612 aa3.32□□□□□ -1.88
UBP5YER144C YPL107WQ02873 248 aa3.32□□□□□ -1.88
UBP5YER144C VPS60Q03390 229 aa3.32□□□□□ -1.88
UBP5YER144C PPM1Q04081 328 aa3.32□□□□□ -1.88
UBP5YER144C VBA4Q04602 768 aaKnown RBP3.32□□□□□ -1.88
UBP5YER144C GTB1Q04924 702 aa3.32□□□□□ -1.88
UBP5YER144C APL4Q12028 832 aa3.32□□□□□ -1.88
UBP5YER144C PDH1Q12428 516 aaKnown RBP3.32□□□□□ -1.88
UBP5YER144C MOT1P32333 1867 aa3.32□□□□□ -1.88
UBP5YER144C ASP3-2P0CX77 362 aa3.32□□□□□ -1.88
UBP5YER144C ASP3-3P0CX78 362 aa3.32□□□□□ -1.88
UBP5YER144C ASP3-4P0CX79 362 aa3.32□□□□□ -1.88
UBP5YER144C ASP3-1P0CZ17 362 aa3.32□□□□□ -1.88
UBP5YER144C SPO12P17123 173 aa3.32□□□□□ -1.88
UBP5YER144C CDC42P19073 191 aa3.32□□□□□ -1.88
UBP5YER144C PEX1P24004 1043 aa3.32□□□□□ -1.88
UBP5YER144C DPH5P32469 300 aaPredicted RBP3.32□□□□□ -1.88
UBP5YER144C MDL1P33310 695 aa3.32□□□□□ -1.88
UBP5YER144C NIP100P33420 868 aa3.32□□□□□ -1.88
UBP5YER144C COY1P34237 679 aa3.32□□□□□ -1.88
UBP5YER144C RRP1P35178 278 aaPredicted RBP3.32□□□□□ -1.88
UBP5YER144C ADH5P38113 351 aaKnown RBP3.32□□□□□ -1.88
UBP5YER144C POL12P38121 705 aaPredicted RBP3.32□□□□□ -1.88
UBP5YER144C GND1P38720 489 aaKnown RBP3.32□□□□□ -1.88
UBP5YER144C RTT107P38850 1070 aa3.32□□□□□ -1.88
UBP5YER144C HRB1P38922 454 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
UBP5YER144C TVP23P38962 199 aa3.32□□□□□ -1.88
UBP5YER144C PZF1P39933 429 aa3.32□□□□□ -1.88
UBP5YER144C RTT105P40063 208 aa3.32□□□□□ -1.88
UBP5YER144C YER186CP40101 306 aa3.32□□□□□ -1.88
UBP5YER144C KEL2P50090 882 aa3.32□□□□□ -1.88
UBP5YER144C YNL134CP53912 376 aaKnown RBP3.32□□□□□ -1.88
UBP5YER144C OAZ1Q02803 292 aa3.32□□□□□ -1.88
UBP5YER144C USA1Q03714 838 aa3.32□□□□□ -1.88
UBP5YER144C RBS1Q05672 457 aaKnown RBP3.32□□□□□ -1.88
UBP5YER144C YFT2Q06676 274 aa3.32□□□□□ -1.88
UBP5YER144C YDL073WQ07454 984 aa3.32□□□□□ -1.88
UBP5YER144C DAS2Q12084 232 aa3.32□□□□□ -1.88
UBP5YER144C SKM1Q12469 655 aa3.32□□□□□ -1.88
UBP5YER144C SEC39Q12745 709 aa3.32□□□□□ -1.88
UBP5YER144C YPT6Q99260 215 aa3.32□□□□□ -1.88
UBP5YER144C OCA4P25366 362 aa3.31□□□□□ -1.88
UBP5YER144C OLA1P38219 394 aaKnown RBP3.31□□□□□ -1.88
UBP5YER144C YBR259WP38338 688 aa3.31□□□□□ -1.88
UBP5YER144C IST3P40565 148 aaPredicted RBP3.31□□□□□ -1.88
UBP5YER144C ARF3P40994 183 aaRIP-Chip data3.31□□□□□ -1.88not detected
UBP5YER144C YRB1P41920 201 aaKnown RBP3.31□□□□□ -1.88
UBP5YER144C CPR7P47103 393 aa3.31□□□□□ -1.88
UBP5YER144C GLO1P50107 326 aa3.31□□□□□ -1.88
UBP5YER144C NOP13P53883 403 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
UBP5YER144C AIM32Q04689 311 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms