RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C YDR239CQ03780 787 aa3.28□□□□□ -1.88
VAB2YEL005C ADE13Q05911 482 aaKnown RBP3.28□□□□□ -1.88
VAB2YEL005C RPS10AQ08745 105 aaPredicted RBP3.28□□□□□ -1.88
VAB2YEL005C MGR1P25573 417 aa3.27□□□□□ -1.89
VAB2YEL005C TCD2P36101 447 aaKnown RBP3.27□□□□□ -1.89
VAB2YEL005C CST26P38226 397 aa3.27□□□□□ -1.89
VAB2YEL005C MUM2P38236 366 aa3.27□□□□□ -1.89
VAB2YEL005C ARC40P38328 384 aaKnown RBP3.27□□□□□ -1.89
VAB2YEL005C BZZ1P38822 633 aa3.27□□□□□ -1.89
VAB2YEL005C MET30P39014 640 aa3.27□□□□□ -1.89
VAB2YEL005C PHO90P39535 881 aa3.27□□□□□ -1.89
VAB2YEL005C ESL1P40456 1118 aa3.27□□□□□ -1.89
VAB2YEL005C SPO22P40511 975 aa3.27□□□□□ -1.89
VAB2YEL005C PKP2P53170 491 aa3.27□□□□□ -1.89
VAB2YEL005C CUL3P53202 744 aa3.27□□□□□ -1.89
VAB2YEL005C LSC1P53598 329 aaKnown RBP3.27□□□□□ -1.89
VAB2YEL005C DIG1Q03063 452 aaKnown RBP3.27□□□□□ -1.89
VAB2YEL005C FIN1Q03898 291 aa3.27□□□□□ -1.89
VAB2YEL005C YMR254CQ04838 102 aa3.27□□□□□ -1.89
VAB2YEL005C FMP42Q04991 504 aa3.27□□□□□ -1.89
VAB2YEL005C YPL272CQ08984 517 aa3.27□□□□□ -1.89
VAB2YEL005C RIM20Q12033 661 aa3.27□□□□□ -1.89
VAB2YEL005C ARP6Q12509 438 aa3.27□□□□□ -1.89
VAB2YEL005C ARG3P05150 338 aa3.26□□□□□ -1.89
VAB2YEL005C MRP13P12686 339 aa3.26□□□□□ -1.89
VAB2YEL005C SYN8P31377 255 aa3.26□□□□□ -1.89
VAB2YEL005C LEU5P38702 357 aa3.26□□□□□ -1.89
VAB2YEL005C MSR1P38714 643 aa3.26□□□□□ -1.89
VAB2YEL005C CCT6P39079 546 aa3.26□□□□□ -1.89
VAB2YEL005C AXL1P40851 1208 aa3.26□□□□□ -1.89
VAB2YEL005C ALK1P43633 760 aaKnown RBP3.26□□□□□ -1.89
VAB2YEL005C APT1P49435 187 aaKnown RBP3.26□□□□□ -1.89
VAB2YEL005C PYK2P52489 506 aaKnown RBP3.26□□□□□ -1.89
VAB2YEL005C HOS2P53096 452 aaPredicted RBP3.26□□□□□ -1.89
VAB2YEL005C TOF2Q02208 771 aa3.26□□□□□ -1.89
VAB2YEL005C YPL014WQ02606 381 aa3.26□□□□□ -1.89
VAB2YEL005C NUP100Q02629 959 aa3.26□□□□□ -1.89
VAB2YEL005C YPL068CQ02749 293 aa3.26□□□□□ -1.89
VAB2YEL005C NUP53Q03790 475 aa3.26□□□□□ -1.89
VAB2YEL005C SPC19Q03954 165 aa3.26□□□□□ -1.89
VAB2YEL005C GLO2Q05584 274 aa3.26□□□□□ -1.89
VAB2YEL005C GRS2Q06817 618 aa3.26□□□□□ -1.89
VAB2YEL005C RLM1Q12224 676 aa3.26□□□□□ -1.89
VAB2YEL005C CDC31P06704 161 aaKnown RBP3.25□□□□□ -1.89
VAB2YEL005C PEP5P12868 1029 aa3.25□□□□□ -1.89
VAB2YEL005C RED1P14291 827 aa3.25□□□□□ -1.89
VAB2YEL005C TYR1P20049 452 aa3.25□□□□□ -1.89
VAB2YEL005C RPN2P32565 945 aaKnown RBP3.25□□□□□ -1.89
VAB2YEL005C OTU2P38747 307 aaKnown RBP3.25□□□□□ -1.89
VAB2YEL005C NPR2P39923 615 aa3.25□□□□□ -1.89
VAB2YEL005C YIL152WP40455 235 aa3.25□□□□□ -1.89
VAB2YEL005C AZF1P41696 914 aa3.25□□□□□ -1.89
VAB2YEL005C IRC6P43615 237 aa3.25□□□□□ -1.89
VAB2YEL005C PET130P47065 347 aa3.25□□□□□ -1.89
VAB2YEL005C MSS11Q03825 758 aa3.25□□□□□ -1.89
VAB2YEL005C FMP45Q07651 309 aa3.25□□□□□ -1.89
VAB2YEL005C RTT109Q07794 436 aa3.25□□□□□ -1.89
VAB2YEL005C THP1Q08231 455 aa3.25□□□□□ -1.89
VAB2YEL005C SRL1Q08673 210 aa3.25□□□□□ -1.89
VAB2YEL005C BRR1Q99177 341 aaPredicted RBP3.25□□□□□ -1.89
VAB2YEL005C HSH49Q99181 213 aaPredicted RBP3.25□□□□□ -1.89
VAB2YEL005C CKA1P15790 372 aa3.24□□□□□ -1.89
VAB2YEL005C FUR1P18562 216 aaKnown RBP3.24□□□□□ -1.89
VAB2YEL005C SEC62P21825 274 aa3.24□□□□□ -1.89
VAB2YEL005C VPS17P32913 551 aa3.24□□□□□ -1.89
VAB2YEL005C TIF3P34167 436 aaKnown RBP3.24□□□□□ -1.89
VAB2YEL005C MTR2P34232 184 aaKnown RBP3.24□□□□□ -1.89
VAB2YEL005C YJL068CP40363 299 aa3.24□□□□□ -1.89
VAB2YEL005C SGN1P40561 250 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
VAB2YEL005C CAF130P53280 1122 aaPredicted RBP3.24□□□□□ -1.89
VAB2YEL005C SMA1Q02651 245 aa3.24□□□□□ -1.89
VAB2YEL005C YLR287CQ05881 355 aa3.24□□□□□ -1.89
VAB2YEL005C YEH2Q07950 538 aa3.24□□□□□ -1.89
VAB2YEL005C APL5Q08951 932 aaKnown RBP3.24□□□□□ -1.89
VAB2YEL005C ATG29Q12092 213 aa3.24□□□□□ -1.89
VAB2YEL005C CSR2Q12734 1121 aa3.24□□□□□ -1.89
VAB2YEL005C RAV1P47104 1357 aa3.24□□□□□ -1.89
VAB2YEL005C HNM1P19807 563 aa3.23□□□□□ -1.89
VAB2YEL005C YCR043CP25361 127 aa3.23□□□□□ -1.89
VAB2YEL005C WBP1P33767 430 aaKnown RBP3.23□□□□□ -1.89
VAB2YEL005C SHP1P34223 423 aa3.23□□□□□ -1.89
VAB2YEL005C CMC1P36064 111 aa3.23□□□□□ -1.89
VAB2YEL005C BNA4P38169 460 aa3.23□□□□□ -1.89
VAB2YEL005C VID24P38263 362 aa3.23□□□□□ -1.89
VAB2YEL005C YIR014WP40570 242 aa3.23□□□□□ -1.89
VAB2YEL005C TES1P41903 349 aaKnown RBP3.23□□□□□ -1.89
VAB2YEL005C FET5P43561 622 aa3.23□□□□□ -1.89
VAB2YEL005C ATG27P46989 271 aa3.23□□□□□ -1.89
VAB2YEL005C ALT2P52892 507 aa3.23□□□□□ -1.89
VAB2YEL005C TWF1P53250 332 aa3.23□□□□□ -1.89
VAB2YEL005C TDA7P53882 636 aaPredicted RBP3.23□□□□□ -1.89
VAB2YEL005C SYF1Q04048 859 aaPredicted RBP3.23□□□□□ -1.89
VAB2YEL005C PDS5Q04264 1277 aa3.23□□□□□ -1.89
VAB2YEL005C BSC1Q12140 328 aa3.23□□□□□ -1.89
VAB2YEL005C CAR1P00812 333 aaKnown RBP3.22□□□□□ -1.89
VAB2YEL005C MET17P06106 444 aa3.22□□□□□ -1.89
VAB2YEL005C YFL068WP0CX99 160 aa3.22□□□□□ -1.89
VAB2YEL005C YLL066W-AP0CY00 160 aa3.22□□□□□ -1.89
VAB2YEL005C YLL067W-AP0CY01 160 aa3.22□□□□□ -1.89
VAB2YEL005C CLB3P24870 427 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms