RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W UBP11P36026 717 aa2.32□□□□□ -2.04
VPS52YDR484W UPF3P48412 387 aaKnown RBP2.32□□□□□ -2.04
VPS52YDR484W LCL3P53153 274 aa2.32□□□□□ -2.04
VPS52YDR484W YGR066CP53242 292 aa2.32□□□□□ -2.04
VPS52YDR484W YGR126WP53274 230 aa2.32□□□□□ -2.04
VPS52YDR484W CRZ1P53968 678 aa2.32□□□□□ -2.04
VPS52YDR484W SHR3Q02774 210 aa2.32□□□□□ -2.04
VPS52YDR484W NGL3Q03210 505 aa2.32□□□□□ -2.04
VPS52YDR484W FMP45Q07651 309 aa2.32□□□□□ -2.04
VPS52YDR484W PMS1P14242 873 aa2.31□□□□□ -2.04
VPS52YDR484W EST1P17214 699 aaPredicted RBP2.31□□□□□ -2.04
VPS52YDR484W IMP2'P32351 346 aa2.31□□□□□ -2.04
VPS52YDR484W ALG5P40350 334 aa2.31□□□□□ -2.04
VPS52YDR484W MAF1P41910 395 aa2.31□□□□□ -2.04
VPS52YDR484W SNG1P46950 547 aa2.31□□□□□ -2.04
VPS52YDR484W HOS2P53096 452 aaPredicted RBP2.31□□□□□ -2.04
VPS52YDR484W SAM50P53969 484 aa2.31□□□□□ -2.04
VPS52YDR484W SUB1P54000 292 aaKnown RBP2.31□□□□□ -2.04
VPS52YDR484W RHO4Q00246 291 aa2.31□□□□□ -2.04
VPS52YDR484W YPL014WQ02606 381 aa2.31□□□□□ -2.04
VPS52YDR484W GLO2Q05584 274 aa2.31□□□□□ -2.04
VPS52YDR484W CTI6Q08923 506 aa2.31□□□□□ -2.04
VPS52YDR484W PDH1Q12428 516 aaKnown RBP2.31□□□□□ -2.04
VPS52YDR484W YPT6Q99260 215 aa2.31□□□□□ -2.04
VPS52YDR484W YML002WP0CF17 737 aa2.3□□□□□ -2.04
VPS52YDR484W SEC62P21825 274 aa2.3□□□□□ -2.04
VPS52YDR484W SGF29P25554 259 aa2.3□□□□□ -2.04
VPS52YDR484W PEP3P27801 918 aa2.3□□□□□ -2.04
VPS52YDR484W CCT4P39078 528 aaKnown RBP2.3□□□□□ -2.04
VPS52YDR484W CCT6P39079 546 aa2.3□□□□□ -2.04
VPS52YDR484W YER130CP39959 443 aa2.3□□□□□ -2.04
VPS52YDR484W ALT2P52892 507 aa2.3□□□□□ -2.04
VPS52YDR484W DSD1P53095 428 aa2.3□□□□□ -2.04
VPS52YDR484W MSC1Q03104 513 aa2.3□□□□□ -2.04
VPS52YDR484W DIC1Q06143 298 aa2.3□□□□□ -2.04
VPS52YDR484W THI20Q08224 551 aa2.3□□□□□ -2.04
VPS52YDR484W YJR112W-AQ3E743 109 aa2.3□□□□□ -2.04
VPS52YDR484W SGS1P35187 1447 aa2.3□□□□□ -2.04
VPS52YDR484W GCN4P03069 281 aa2.3□□□□□ -2.04
VPS52YDR484W OLE1P21147 510 aaKnown RBP2.3□□□□□ -2.04
VPS52YDR484W ECM15P35195 104 aa2.3□□□□□ -2.04
VPS52YDR484W FMP46P36141 133 aaKnown RBP2.3□□□□□ -2.04
VPS52YDR484W REG2P38232 338 aa2.3□□□□□ -2.04
VPS52YDR484W YHR210CP38893 341 aa2.3□□□□□ -2.04
VPS52YDR484W CSM2P40465 213 aa2.3□□□□□ -2.04
VPS52YDR484W ALK1P43633 760 aaKnown RBP2.3□□□□□ -2.04
VPS52YDR484W IPI3P53877 555 aa2.3□□□□□ -2.04
VPS52YDR484W FIN1Q03898 291 aa2.3□□□□□ -2.04
VPS52YDR484W YDL057WQ07379 328 aa2.3□□□□□ -2.04
VPS52YDR484W DAP1Q12091 152 aa2.3□□□□□ -2.04
VPS52YDR484W TIP41Q12199 356 aa2.3□□□□□ -2.04
VPS52YDR484W MRP13P12686 339 aa2.29□□□□□ -2.04
VPS52YDR484W CBS1P14066 229 aa2.29□□□□□ -2.04
VPS52YDR484W PDA1P16387 420 aaKnown RBP2.29□□□□□ -2.04
VPS52YDR484W RPS2P25443 254 aaKnown RBP2.29□□□□□ -2.04
VPS52YDR484W PRO3P32263 286 aaKnown RBP2.29□□□□□ -2.04
VPS52YDR484W TIF3P34167 436 aaKnown RBP2.29□□□□□ -2.04
VPS52YDR484W RMD8P43620 662 aa2.29□□□□□ -2.04
VPS52YDR484W IKS1P47042 667 aa2.29□□□□□ -2.04
VPS52YDR484W MRX6P48564 524 aa2.29□□□□□ -2.04
VPS52YDR484W RBG2P53295 368 aaKnown RBP2.29□□□□□ -2.04
VPS52YDR484W TOF2Q02208 771 aa2.29□□□□□ -2.04
VPS52YDR484W RBA50Q04418 439 aa2.29□□□□□ -2.04
VPS52YDR484W VPS38Q05919 439 aa2.29□□□□□ -2.04
VPS52YDR484W BUD21Q08492 214 aaPredicted RBP2.29□□□□□ -2.04
VPS52YDR484W AVL9Q12500 764 aa2.29□□□□□ -2.04
VPS52YDR484W PHO2P07269 559 aa2.29□□□□□ -2.04
VPS52YDR484W DFR1P07807 211 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
VPS52YDR484W PAP1P29468 568 aaKnown RBP2.29□□□□□ -2.04
VPS52YDR484W SHP1P34223 423 aa2.29□□□□□ -2.04
VPS52YDR484W TCD2P36101 447 aaKnown RBP2.29□□□□□ -2.04
VPS52YDR484W YJR154WP47181 346 aa2.29□□□□□ -2.04
VPS52YDR484W IMD4P50094 524 aaKnown RBP2.29□□□□□ -2.04
VPS52YDR484W VPS75P53853 264 aa2.29□□□□□ -2.04
VPS52YDR484W IMH1Q06704 911 aaKnown RBP2.29□□□□□ -2.04
VPS52YDR484W NCE102Q12207 173 aaRIP-Chip data2.29□□□□□ -2.04not detected
VPS52YDR484W RRI2Q12348 645 aa2.29□□□□□ -2.04
VPS52YDR484W HSH49Q99181 213 aaPredicted RBP2.29□□□□□ -2.04
VPS52YDR484W CAR1P00812 333 aaKnown RBP2.28□□□□□ -2.04
VPS52YDR484W APE1P14904 514 aa2.28□□□□□ -2.04
VPS52YDR484W OCA4P25366 362 aa2.28□□□□□ -2.04
VPS52YDR484W MSR1P38714 643 aa2.28□□□□□ -2.04
VPS52YDR484W BUD32P53323 261 aa2.28□□□□□ -2.04
VPS52YDR484W RPM2Q02773 1202 aa2.28□□□□□ -2.04
VPS52YDR484W YOR365CQ08844 703 aa2.28□□□□□ -2.04
VPS52YDR484W BRR1Q99177 341 aaPredicted RBP2.28□□□□□ -2.04
VPS52YDR484W CYB2P00175 591 aa2.27□□□□□ -2.05
VPS52YDR484W PEP4P07267 405 aaKnown RBP2.27□□□□□ -2.05
VPS52YDR484W MTF1P14908 341 aaKnown RBP2.27□□□□□ -2.05
VPS52YDR484W YME1P32795 747 aa2.27□□□□□ -2.05
VPS52YDR484W YBR225WP38321 900 aa2.27□□□□□ -2.05
VPS52YDR484W OSH3P38713 996 aaKnown RBP2.27□□□□□ -2.05
VPS52YDR484W MDM31P38880 579 aa2.27□□□□□ -2.05
VPS52YDR484W NAB3P38996 802 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
VPS52YDR484W RPT6Q01939 405 aaKnown RBP2.27□□□□□ -2.05
VPS52YDR484W HCR1Q05775 265 aaKnown RBP2.27□□□□□ -2.05
VPS52YDR484W THP1Q08231 455 aa2.27□□□□□ -2.05
VPS52YDR484W PPT2Q12036 173 aa2.27□□□□□ -2.05
VPS52YDR484W RLM1Q12224 676 aa2.27□□□□□ -2.05
VPS52YDR484W MED1Q12321 566 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms