RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	DAP1	Q12091	152 aa		4.53	□□□□□ -1.68
TRP4	YDR354W	YML002W	P0CF17	737 aa		4.52	□□□□□ -1.69
TRP4	YDR354W	PDA1	P16387	420 aa	Known RBP	4.52	□□□□□ -1.69
TRP4	YDR354W	PWP1	P21304	576 aa	Known RBP	4.52	□□□□□ -1.69
TRP4	YDR354W	PDB1	P32473	366 aa	Known RBP	4.52	□□□□□ -1.69
TRP4	YDR354W	PHD1	P36093	366 aa		4.52	□□□□□ -1.69
TRP4	YDR354W	YNG2	P38806	282 aa	Known RBP	4.52	□□□□□ -1.69
TRP4	YDR354W	ELO1	P39540	310 aa		4.52	□□□□□ -1.69
TRP4	YDR354W	YER130C	P39959	443 aa		4.52	□□□□□ -1.69
TRP4	YDR354W	RPS10B	P46784	105 aa	Known RBP	4.52	□□□□□ -1.69
TRP4	YDR354W	GUF1	P46943	645 aa		4.52	□□□□□ -1.69
TRP4	YDR354W	VIP1	Q06685	1146 aa	Known RBP	4.52	□□□□□ -1.69
TRP4	YDR354W	RIX7	Q07844	837 aa	Known RBP	4.52	□□□□□ -1.69
TRP4	YDR354W	GRC3	Q07845	632 aa		4.52	□□□□□ -1.69
TRP4	YDR354W	YSP2	Q06681	1438 aa		4.52	□□□□□ -1.69
TRP4	YDR354W	PMS1	P14242	873 aa		4.51	□□□□□ -1.69
TRP4	YDR354W	ERG1	P32476	496 aa	Known RBP	4.51	□□□□□ -1.69
TRP4	YDR354W	MIC60	P36112	540 aa		4.51	□□□□□ -1.69
TRP4	YDR354W	TSC10	P38342	320 aa		4.51	□□□□□ -1.69
TRP4	YDR354W	DIA3	P52290	468 aa		4.51	□□□□□ -1.69
TRP4	YDR354W	RTT103	Q05543	409 aa		4.51	□□□□□ -1.69
TRP4	YDR354W	FMP45	Q07651	309 aa		4.51	□□□□□ -1.69
TRP4	YDR354W	SSP2	Q08646	371 aa		4.51	□□□□□ -1.69
TRP4	YDR354W	IML1	P47170	1584 aa		4.51	□□□□□ -1.69
TRP4	YDR354W	SPC34	P36131	295 aa		4.5	□□□□□ -1.69
TRP4	YDR354W	DBP8	P38719	431 aa		4.5	□□□□□ -1.69
TRP4	YDR354W	YJL068C	P40363	299 aa		4.5	□□□□□ -1.69
TRP4	YDR354W	SIP4	P46954	829 aa		4.5	□□□□□ -1.69
TRP4	YDR354W	SGM1	P47166	707 aa		4.5	□□□□□ -1.69
TRP4	YDR354W	LYS4	P49367	693 aa	Predicted RBP	4.5	□□□□□ -1.69
TRP4	YDR354W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
TRP4	YDR354W	TDA7	P53882	636 aa	Predicted RBP	4.5	□□□□□ -1.69
TRP4	YDR354W	ECM30	Q06673	1274 aa		4.5	□□□□□ -1.69
TRP4	YDR354W	HIF1	Q12373	385 aa		4.5	□□□□□ -1.69
TRP4	YDR354W	NKP1	Q12493	238 aa		4.5	□□□□□ -1.69
TRP4	YDR354W	DNF3	Q12674	1656 aa		4.5	□□□□□ -1.69
TRP4	YDR354W	LTE1	P07866	1435 aa		4.49	□□□□□ -1.69
TRP4	YDR354W	ARG81	P05085	880 aa		4.49	□□□□□ -1.69
TRP4	YDR354W	PUT2	P07275	575 aa		4.49	□□□□□ -1.69
TRP4	YDR354W	TRX2	P22803	104 aa	Known RBP	4.49	□□□□□ -1.69
TRP4	YDR354W	VMA16	P23968	213 aa		4.49	□□□□□ -1.69
TRP4	YDR354W	PRS1	P32895	427 aa	Known RBP	4.49	□□□□□ -1.69
TRP4	YDR354W	ROT2	P38138	954 aa		4.49	□□□□□ -1.69
TRP4	YDR354W	DPH1	P40487	425 aa	Known RBP	4.49	□□□□□ -1.69
TRP4	YDR354W	AXL1	P40851	1208 aa		4.49	□□□□□ -1.69
TRP4	YDR354W	RSM23	Q01163	450 aa		4.49	□□□□□ -1.69
TRP4	YDR354W	MSS11	Q03825	758 aa		4.49	□□□□□ -1.69
TRP4	YDR354W	RAD30	Q04049	632 aa		4.49	□□□□□ -1.69
TRP4	YDR354W	RTT109	Q07794	436 aa		4.49	□□□□□ -1.69
TRP4	YDR354W	TEN1	Q07921	160 aa		4.49	□□□□□ -1.69
TRP4	YDR354W	LEU9	Q12166	604 aa	Known RBP	4.49	□□□□□ -1.69
TRP4	YDR354W	MHP1	P43638	1398 aa		4.49	□□□□□ -1.69
TRP4	YDR354W	FUM1	P08417	488 aa	Known RBP	4.48	□□□□□ -1.69
TRP4	YDR354W	RPS2	P25443	254 aa	Known RBP	4.48	□□□□□ -1.69
TRP4	YDR354W	ACH1	P32316	526 aa		4.48	□□□□□ -1.69
TRP4	YDR354W	MAL33	P38157	468 aa		4.48	□□□□□ -1.69
TRP4	YDR354W	PYK2	P52489	506 aa	Known RBP	4.48	□□□□□ -1.69
TRP4	YDR354W	RER1	P25560	188 aa		4.47	□□□□□ -1.69
TRP4	YDR354W	MFT1	P33441	392 aa	Known RBP	4.47	□□□□□ -1.69
TRP4	YDR354W	ERP2	P39704	215 aa		4.47	□□□□□ -1.69
TRP4	YDR354W	ERG26	P53199	349 aa	Known RBP	4.47	□□□□□ -1.69
TRP4	YDR354W	RBA50	Q04418	439 aa		4.47	□□□□□ -1.69
TRP4	YDR354W	DPB4	Q04603	196 aa	Known RBP	4.47	□□□□□ -1.69
TRP4	YDR354W	DIC1	Q06143	298 aa		4.47	□□□□□ -1.69
TRP4	YDR354W	SSK1	Q07084	712 aa		4.47	□□□□□ -1.69
TRP4	YDR354W	TCO89	Q08921	799 aa		4.47	□□□□□ -1.69
TRP4	YDR354W	PDH1	Q12428	516 aa	Known RBP	4.47	□□□□□ -1.69
TRP4	YDR354W	SKM1	Q12469	655 aa		4.47	□□□□□ -1.69
TRP4	YDR354W	NUP157	P40064	1391 aa	Known RBP	4.47	□□□□□ -1.69
TRP4	YDR354W	PDR11	P40550	1411 aa		4.46	□□□□□ -1.69
TRP4	YDR354W	MRS3	P10566	314 aa		4.46	□□□□□ -1.7
TRP4	YDR354W	ADH7	P25377	361 aa		4.46	□□□□□ -1.7
TRP4	YDR354W	PRO3	P32263	286 aa	Known RBP	4.46	□□□□□ -1.7
TRP4	YDR354W	RTS1	P38903	757 aa		4.46	□□□□□ -1.7
TRP4	YDR354W	NOC2	P39744	710 aa	Known RBP	4.46	□□□□□ -1.7
TRP4	YDR354W	DIM1	P41819	318 aa	Known RBP	4.46	□□□□□ -1.7
TRP4	YDR354W	ARC1	P46672	376 aa	Known RBP	4.46	□□□□□ -1.7
TRP4	YDR354W	BSC5	P53755	489 aa		4.46	□□□□□ -1.7
TRP4	YDR354W	SCW10	Q04951	389 aa		4.46	□□□□□ -1.7
TRP4	YDR354W	YDL121C	Q07541	149 aa		4.46	□□□□□ -1.7
TRP4	YDR354W	ARP6	Q12509	438 aa		4.46	□□□□□ -1.7
TRP4	YDR354W	MMS1	Q06211	1407 aa		4.46	□□□□□ -1.7
TRP4	YDR354W	CFT1	Q06632	1357 aa	Known RBP	4.45	□□□□□ -1.7
TRP4	YDR354W	CDC24	P11433	854 aa	Predicted RBP	4.45	□□□□□ -1.7
TRP4	YDR354W	TYR1	P20049	452 aa		4.45	□□□□□ -1.7
TRP4	YDR354W	KGD1	P20967	1014 aa	Known RBP	4.45	□□□□□ -1.7
TRP4	YDR354W	SNC1	P31109	117 aa		4.45	□□□□□ -1.7
TRP4	YDR354W	SYN8	P31377	255 aa		4.45	□□□□□ -1.7
TRP4	YDR354W	RPS0A	P32905	252 aa	Known RBP	4.45	□□□□□ -1.7
TRP4	YDR354W	AGP2	P38090	596 aa		4.45	□□□□□ -1.7
TRP4	YDR354W	RRP3	P38712	501 aa	Known RBP	4.45	□□□□□ -1.7
TRP4	YDR354W	SMM1	P53720	384 aa	Known RBP	4.45	□□□□□ -1.7
TRP4	YDR354W	YSA1	Q01976	231 aa		4.45	□□□□□ -1.7
TRP4	YDR354W	YVH1	Q02256	364 aa	Known RBP	4.45	□□□□□ -1.7
TRP4	YDR354W	YPL014W	Q02606	381 aa		4.45	□□□□□ -1.7
TRP4	YDR354W	PRE8	P23639	250 aa		4.44	□□□□□ -1.7
TRP4	YDR354W	MTR2	P34232	184 aa	Known RBP	4.44	□□□□□ -1.7
TRP4	YDR354W	LAG1	P38703	411 aa		4.44	□□□□□ -1.7
TRP4	YDR354W	KRE9	P39005	276 aa		4.44	□□□□□ -1.7
TRP4	YDR354W	IKS1	P47042	667 aa		4.44	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 51.2 ms