RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	RIM20	Q12033	661 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	RRG1	Q12167	365 aa	Predicted RBP	4.7	□□□□□ -1.66
YPK3	YBR028C	YOL159C-A	Q3E769	90 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	PMS1	P14242	873 aa		4.69	□□□□□ -1.66
YPK3	YBR028C	RPS2	P25443	254 aa	Known RBP	4.69	□□□□□ -1.66
YPK3	YBR028C	PDR3	P33200	976 aa		4.69	□□□□□ -1.66
YPK3	YBR028C	ROT2	P38138	954 aa		4.69	□□□□□ -1.66
YPK3	YBR028C	RKM3	P38222	552 aa		4.69	□□□□□ -1.66
YPK3	YBR028C	MUM2	P38236	366 aa		4.69	□□□□□ -1.66
YPK3	YBR028C	MSR1	P38714	643 aa		4.69	□□□□□ -1.66
YPK3	YBR028C	YIR016W	P40572	265 aa		4.69	□□□□□ -1.66
YPK3	YBR028C	YGR126W	P53274	230 aa		4.69	□□□□□ -1.66
YPK3	YBR028C	SCW4	P53334	386 aa	Known RBP	4.69	□□□□□ -1.66
YPK3	YBR028C	YNL234W	P53857	426 aa		4.69	□□□□□ -1.66
YPK3	YBR028C	ATG29	Q12092	213 aa		4.69	□□□□□ -1.66
YPK3	YBR028C	PEP4	P07267	405 aa	Known RBP	4.68	□□□□□ -1.66
YPK3	YBR028C	YFL068W	P0CX99	160 aa		4.68	□□□□□ -1.66
YPK3	YBR028C	YLL066W-A	P0CY00	160 aa		4.68	□□□□□ -1.66
YPK3	YBR028C	YLL067W-A	P0CY01	160 aa		4.68	□□□□□ -1.66
YPK3	YBR028C	FUR1	P18562	216 aa	Known RBP	4.68	□□□□□ -1.66
YPK3	YBR028C	MFT1	P33441	392 aa	Known RBP	4.68	□□□□□ -1.66
YPK3	YBR028C	YPK3	P38070	525 aa		4.68	□□□□□ -1.66
YPK3	YBR028C	LSM5	P40089	93 aa	Known RBP	4.68	□□□□□ -1.66
YPK3	YBR028C	YIL152W	P40455	235 aa		4.68	□□□□□ -1.66
YPK3	YBR028C	RTS2	P40962	232 aa		4.68	□□□□□ -1.66
YPK3	YBR028C	FET5	P43561	622 aa		4.68	□□□□□ -1.66
YPK3	YBR028C	TWF1	P53250	332 aa		4.68	□□□□□ -1.66
YPK3	YBR028C	YNL181W	P53878	407 aa		4.68	□□□□□ -1.66
YPK3	YBR028C	YVH1	Q02256	364 aa	Known RBP	4.68	□□□□□ -1.66
YPK3	YBR028C	YDL057W	Q07379	328 aa		4.68	□□□□□ -1.66
YPK3	YBR028C	MLH2	Q07980	695 aa		4.68	□□□□□ -1.66
YPK3	YBR028C	GID7	P25569	745 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	YME1	P32795	747 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	NFU1	P32860	256 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	PMT1	P33775	817 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	LAG1	P38703	411 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	SPC97	P38863	823 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	SNG1	P46950	547 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	BUD32	P53323	261 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	SMM1	P53720	384 aa	Known RBP	4.67	□□□□□ -1.66
YPK3	YBR028C	DUG3	P53871	357 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	YMR155W	Q03795	547 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	SPC19	Q03954	165 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	BSC1	Q12140	328 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	UBX3	Q12229	455 aa		4.67	□□□□□ -1.66
YPK3	YBR028C	SEC66	P33754	206 aa		4.66	□□□□□ -1.66
YPK3	YBR028C	CMC1	P36064	111 aa		4.66	□□□□□ -1.66
YPK3	YBR028C	GPD2	P41911	440 aa	Known RBP	4.66	□□□□□ -1.66
YPK3	YBR028C	STB2	P46679	850 aa		4.66	□□□□□ -1.66
YPK3	YBR028C	BET4	Q00618	327 aa		4.66	□□□□□ -1.66
YPK3	YBR028C	TOF2	Q02208	771 aa		4.66	□□□□□ -1.66
YPK3	YBR028C	YPL014W	Q02606	381 aa		4.66	□□□□□ -1.66
YPK3	YBR028C	YOR365C	Q08844	703 aa		4.66	□□□□□ -1.66
YPK3	YBR028C	SEC39	Q12745	709 aa		4.66	□□□□□ -1.66
YPK3	YBR028C	YDL007C-A	Q2V2Q0	85 aa		4.66	□□□□□ -1.66
YPK3	YBR028C	MGR1	P25573	417 aa		4.65	□□□□□ -1.66
YPK3	YBR028C	EFM2	P38347	419 aa		4.65	□□□□□ -1.66
YPK3	YBR028C	YHR210C	P38893	341 aa		4.65	□□□□□ -1.66
YPK3	YBR028C	IAH1	P41734	238 aa		4.65	□□□□□ -1.66
YPK3	YBR028C	YMR160W	Q03823	816 aa		4.65	□□□□□ -1.66
YPK3	YBR028C	YMR034C	Q05131	434 aa	Predicted RBP	4.65	□□□□□ -1.66
YPK3	YBR028C	RQC1	Q05468	723 aa	Known RBP	4.65	□□□□□ -1.66
YPK3	YBR028C	DIC1	Q06143	298 aa		4.65	□□□□□ -1.66
YPK3	YBR028C	CDC45	Q08032	650 aa		4.65	□□□□□ -1.66
YPK3	YBR028C	DSE3	Q08729	430 aa		4.65	□□□□□ -1.66
YPK3	YBR028C	APL5	Q08951	932 aa	Known RBP	4.65	□□□□□ -1.66
YPK3	YBR028C	RGT2	Q12300	763 aa		4.65	□□□□□ -1.66
YPK3	YBR028C	MCM4	P30665	933 aa	Known RBP	4.65	□□□□□ -1.67
YPK3	YBR028C	SNC1	P31109	117 aa		4.65	□□□□□ -1.67
YPK3	YBR028C	SAS3	P34218	831 aa		4.65	□□□□□ -1.67
YPK3	YBR028C	YKL023W	P36103	277 aa	Known RBP	4.65	□□□□□ -1.67
YPK3	YBR028C	BYE1	P36106	594 aa		4.65	□□□□□ -1.67
YPK3	YBR028C	SMA1	Q02651	245 aa		4.65	□□□□□ -1.67
YPK3	YBR028C	PDS5	Q04264	1277 aa		4.65	□□□□□ -1.67
YPK3	YBR028C	RAD52	P06778	471 aa	Known RBP	4.64	□□□□□ -1.67
YPK3	YBR028C	ATO2	P32907	282 aa		4.64	□□□□□ -1.67
YPK3	YBR028C	PHD1	P36093	366 aa		4.64	□□□□□ -1.67
YPK3	YBR028C	ERG7	P38604	731 aa		4.64	□□□□□ -1.67
YPK3	YBR028C	HXT14	P42833	540 aa		4.64	□□□□□ -1.67
YPK3	YBR028C	CAF130	P53280	1122 aa	Predicted RBP	4.64	□□□□□ -1.67
YPK3	YBR028C	RHO4	Q00246	291 aa		4.64	□□□□□ -1.67
YPK3	YBR028C	SHR3	Q02774	210 aa		4.64	□□□□□ -1.67
YPK3	YBR028C	GIR2	Q03768	265 aa	Predicted RBP	4.64	□□□□□ -1.67
YPK3	YBR028C	TAP42	Q04372	366 aa		4.64	□□□□□ -1.67
YPK3	YBR028C	YMR254C	Q04838	102 aa		4.64	□□□□□ -1.67
YPK3	YBR028C	RSF1	Q05043	376 aa		4.64	□□□□□ -1.67
YPK3	YBR028C	SSK1	Q07084	712 aa		4.64	□□□□□ -1.67
YPK3	YBR028C	AFT2	Q08957	416 aa		4.64	□□□□□ -1.67
YPK3	YBR028C	PEP5	P12868	1029 aa		4.63	□□□□□ -1.67
YPK3	YBR028C	PRP2	P20095	876 aa	Predicted RBP	4.63	□□□□□ -1.67
YPK3	YBR028C	SUI2	P20459	304 aa	Known RBP	4.63	□□□□□ -1.67
YPK3	YBR028C	SPC34	P36131	295 aa		4.63	□□□□□ -1.67
YPK3	YBR028C	KEL1	P38853	1164 aa	Known RBP	4.63	□□□□□ -1.67
YPK3	YBR028C	YER130C	P39959	443 aa		4.63	□□□□□ -1.67
YPK3	YBR028C	ALK1	P43633	760 aa	Known RBP	4.63	□□□□□ -1.67
YPK3	YBR028C	RPA49	Q01080	415 aa	Predicted RBP	4.63	□□□□□ -1.67
YPK3	YBR028C	DIG1	Q03063	452 aa	Known RBP	4.63	□□□□□ -1.67
YPK3	YBR028C	RBS1	Q05672	457 aa	Known RBP	4.63	□□□□□ -1.67
YPK3	YBR028C	THP1	Q08231	455 aa		4.63	□□□□□ -1.67
YPK3	YBR028C	SFI1	Q12369	946 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 99.9 ms