RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeast

Gene SSN8, Length 972 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSN8	YNL025C	CAR2	P07991	424 aa	Known RBP	3.12	□□□□□ -1.91
SSN8	YNL025C	TY2A-LR1	P0C2J4	438 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	TY2A-F	P0CX61	438 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	TY2A-GR2	P0CX62	438 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	PET122	P10355	254 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	SAM1	P10659	382 aa	Known RBP	3.12	□□□□□ -1.91
SSN8	YNL025C	ERG8	P24521	451 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	ERG6	P25087	383 aa	Known RBP	3.12	□□□□□ -1.91
SSN8	YNL025C	SPS22	P25380	463 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	TY2A-C	P25383	438 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	NTH1	P32356	751 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	COT1	P32798	439 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	HIS7	P33734	552 aa	Known RBP	3.12	□□□□□ -1.91
SSN8	YNL025C	KKQ8	P36004	724 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	ECM4	P36156	370 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	FLO10	P36170	1169 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	AGP2	P38090	596 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	UBP13	P38187	747 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	CBR1	P38626	284 aa	Known RBP	3.12	□□□□□ -1.91
SSN8	YNL025C	YHR033W	P38690	423 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	YJL206C	P39529	758 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	SSO2	P39926	295 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	VFA1	P40080	203 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	SLZ1	P40167	298 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	YTA12	P40341	825 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	BUD8	P41698	603 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	RPA34	P47006	233 aa	Predicted RBP	3.12	□□□□□ -1.91
SSN8	YNL025C	TAF4	P50105	388 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	PRM1	P53835	661 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	ACS1	Q01574	713 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	TY2A-DR2	Q03483	438 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	YDR239C	Q03780	787 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	ASM4	Q05166	528 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	BOP2	Q06150	570 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	VAC14	Q06708	880 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	BUG1	Q12191	341 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	UBX3	Q12229	455 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	TY2A-B	Q12260	438 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	TY2A-OR2	Q12293	438 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	TY2A-DR1	Q12392	438 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	TY2A-OR1	Q12439	438 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	AVL9	Q12500	764 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	TY2A-DR3	Q99303	438 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	RAD61	Q99359	647 aa		3.12	□□□□□ -1.91
SSN8	YNL025C	SSK22	P25390	1331 aa	Predicted RBP	3.12	□□□□□ -1.91
SSN8	YNL025C	GPA1	P08539	472 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	SEC12	P11655	471 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	PET18	P25362	215 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	AFG1	P32317	509 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	ASF2	P32448	525 aa	Predicted RBP	3.11	□□□□□ -1.91
SSN8	YNL025C	PET127	P32606	800 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	YKR015C	P36111	568 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	ALY1	P36117	915 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	MRPL4	P36517	319 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	MRPL37	P36532	105 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	ADH5	P38113	351 aa	Known RBP	3.11	□□□□□ -1.91
SSN8	YNL025C	MAL33	P38157	468 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	MMS4	P38257	691 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	MSG5	P38590	489 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	SIP3	P38717	1229 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	LIN1	P38852	340 aa	Predicted RBP	3.11	□□□□□ -1.91
SSN8	YNL025C	AFG3	P39925	761 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	NDC80	P40460	691 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	YRB2	P40517	327 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	DOT5	P40553	215 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	GSM1	P42950	618 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	YFR018C	P43599	363 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	ZAP1	P47043	880 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	MTR3	P48240	250 aa	Predicted RBP	3.11	□□□□□ -1.91
SSN8	YNL025C	APT1	P49435	187 aa	Known RBP	3.11	□□□□□ -1.91
SSN8	YNL025C	RMD9	P53140	646 aa	Known RBP	3.11	□□□□□ -1.91
SSN8	YNL025C	TEX1	P53851	422 aa	Known RBP	3.11	□□□□□ -1.91
SSN8	YNL025C	YNL050C	P53952	270 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	ARP4	P80428	489 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	REG1	Q00816	1014 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	NGL2	Q03264	515 aa	Known RBP	3.11	□□□□□ -1.91
SSN8	YNL025C	VPS20	Q04272	221 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	YLR297W	Q05899	129 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	SSQ1	Q05931	657 aa	Predicted RBP	3.11	□□□□□ -1.91
SSN8	YNL025C	CRN1	Q06440	651 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	VAM6	Q07468	1049 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	TMA16	Q08687	178 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	LEA1	Q08963	238 aa	Predicted RBP	3.11	□□□□□ -1.91
SSN8	YNL025C	AEP3	Q12089	606 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	MED2	Q12124	431 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	LEU9	Q12166	604 aa	Known RBP	3.11	□□□□□ -1.91
SSN8	YNL025C	YKL033W-A	Q86ZR7	236 aa		3.11	□□□□□ -1.91
SSN8	YNL025C	URA3	P03962	267 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	PYC1	P11154	1178 aa	Known RBP	3.1	□□□□□ -1.91
SSN8	YNL025C	CDC23	P16522	626 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	FUS3	P16892	353 aa	Known RBP	3.1	□□□□□ -1.91
SSN8	YNL025C	DAP2	P18962	818 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	FAA1	P30624	700 aa	Known RBP	3.1	□□□□□ -1.91
SSN8	YNL025C	CRM1	P30822	1084 aa	Known RBP	3.1	□□□□□ -1.91
SSN8	YNL025C	SRB4	P32569	687 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	SUA5	P32579	426 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	PEX2	P32800	271 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	YME2	P32843	850 aa		3.1	□□□□□ -1.91
SSN8	YNL025C	NTC20	P38302	140 aa	Predicted RBP	3.1	□□□□□ -1.91
SSN8	YNL025C	RRT2	P38332	387 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 513.5 ms