RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C PSA1P41940 361 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C CTK2P46962 323 aa3.47□□□□□ -1.85
VPS33YLR396C AAD10P47182 288 aa3.47□□□□□ -1.85
VPS33YLR396C COP1P53622 1201 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C BSC5P53755 489 aa3.47□□□□□ -1.85
VPS33YLR396C SUB1P54000 292 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C CSI1Q04368 295 aa3.47□□□□□ -1.85
VPS33YLR396C YKU80Q04437 629 aa3.47□□□□□ -1.85
VPS33YLR396C PDR8Q06149 701 aa3.47□□□□□ -1.85
VPS33YLR396C YLR455WQ06188 304 aa3.47□□□□□ -1.85
VPS33YLR396C NDL1Q06568 189 aa3.47□□□□□ -1.85
VPS33YLR396C MCH4Q08268 501 aa3.47□□□□□ -1.85
VPS33YLR396C YDR056CQ12025 205 aa3.47□□□□□ -1.85
VPS33YLR396C APL4Q12028 832 aa3.47□□□□□ -1.85
VPS33YLR396C ATG9Q12142 997 aa3.47□□□□□ -1.85
VPS33YLR396C CRC1Q12289 327 aa3.47□□□□□ -1.85
VPS33YLR396C SUP35P05453 685 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C CDC16P09798 840 aa3.47□□□□□ -1.85
VPS33YLR396C YAP1P19880 650 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C ECM32P32644 1121 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C MUD2P36084 527 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C SPT8P38915 602 aa3.47□□□□□ -1.85
VPS33YLR396C MNT3P40549 630 aa3.47□□□□□ -1.85
VPS33YLR396C CFD1P40558 293 aa3.47□□□□□ -1.85
VPS33YLR396C IAH1P41734 238 aa3.47□□□□□ -1.85
VPS33YLR396C ARC1P46672 376 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C YGL242CP53066 181 aa3.47□□□□□ -1.85
VPS33YLR396C ENT4Q07872 247 aa3.47□□□□□ -1.85
VPS33YLR396C SDH5Q08230 162 aa3.47□□□□□ -1.85
VPS33YLR396C DDP1Q99321 188 aaKnown RBP3.47□□□□□ -1.85
VPS33YLR396C SWI1P09547 1314 aa3.46□□□□□ -1.85
VPS33YLR396C CHO1P08456 276 aa3.46□□□□□ -1.86
VPS33YLR396C PRP16P15938 1071 aaPredicted RBP3.46□□□□□ -1.86
VPS33YLR396C MRPS28P21771 286 aa3.46□□□□□ -1.86
VPS33YLR396C YCR006CP25350 157 aa3.46□□□□□ -1.86
VPS33YLR396C YIL024CP40543 189 aa3.46□□□□□ -1.86
VPS33YLR396C ARO80Q04052 950 aa3.46□□□□□ -1.86
VPS33YLR396C VIP1Q06685 1146 aaKnown RBP3.46□□□□□ -1.86
VPS33YLR396C CMS1Q07897 291 aaKnown RBP3.46□□□□□ -1.86
VPS33YLR396C APL5Q08951 932 aaKnown RBP3.46□□□□□ -1.86
VPS33YLR396C SEC7P11075 2009 aaKnown RBP3.46□□□□□ -1.86
VPS33YLR396C BCK1Q01389 1478 aa3.46□□□□□ -1.86
VPS33YLR396C NUP188P52593 1655 aaKnown RBP3.46□□□□□ -1.86
VPS33YLR396C YER145C-AA0A023PYF4 145 aa3.45□□□□□ -1.86
VPS33YLR396C YBR085C-AO43137 85 aa3.45□□□□□ -1.86
VPS33YLR396C ARD1P07347 238 aaPredicted RBP3.45□□□□□ -1.86
VPS33YLR396C KRS1P15180 591 aaKnown RBP3.45□□□□□ -1.86
VPS33YLR396C CNA1P23287 553 aa3.45□□□□□ -1.86
VPS33YLR396C PSO2P30620 661 aa3.45□□□□□ -1.86
VPS33YLR396C NUF2P33895 451 aa3.45□□□□□ -1.86
VPS33YLR396C RRP1P35178 278 aaPredicted RBP3.45□□□□□ -1.86
VPS33YLR396C CCT4P39078 528 aaKnown RBP3.45□□□□□ -1.86
VPS33YLR396C YER130CP39959 443 aa3.45□□□□□ -1.86
VPS33YLR396C YEL068CP39977 110 aa3.45□□□□□ -1.86
VPS33YLR396C NET1P47035 1189 aa3.45□□□□□ -1.86
VPS33YLR396C APT1P49435 187 aaKnown RBP3.45□□□□□ -1.86
VPS33YLR396C YGL036WP53185 909 aaPredicted RBP3.45□□□□□ -1.86
VPS33YLR396C INA17Q02888 182 aa3.45□□□□□ -1.86
VPS33YLR396C SKG3Q06315 1026 aa3.45□□□□□ -1.86
VPS33YLR396C RIX7Q07844 837 aaKnown RBP3.45□□□□□ -1.86
VPS33YLR396C RPS19AP07280 144 aaKnown RBP3.45□□□□□ -1.86
VPS33YLR396C RPS19BP07281 144 aaPredicted RBP3.45□□□□□ -1.86
VPS33YLR396C RPO41P13433 1351 aaKnown RBP3.45□□□□□ -1.86
VPS33YLR396C RPO26P20435 155 aa3.45□□□□□ -1.86
VPS33YLR396C PTP1P25044 335 aa3.45□□□□□ -1.86
VPS33YLR396C RDS1P25611 832 aa3.45□□□□□ -1.86
VPS33YLR396C PAH1P32567 862 aa3.45□□□□□ -1.86
VPS33YLR396C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
VPS33YLR396C PXL1P36166 706 aa3.45□□□□□ -1.86
VPS33YLR396C KTR3P38130 404 aaPredicted RBP3.45□□□□□ -1.86
VPS33YLR396C YFR020WP43600 232 aa3.45□□□□□ -1.86
VPS33YLR396C YSA1Q01976 231 aa3.45□□□□□ -1.86
VPS33YLR396C VTC3Q02725 835 aa3.45□□□□□ -1.86
VPS33YLR396C TAP42Q04372 366 aa3.45□□□□□ -1.86
VPS33YLR396C RUD3Q12234 484 aaKnown RBP3.45□□□□□ -1.86
VPS33YLR396C RRI1Q12468 440 aa3.45□□□□□ -1.86
VPS33YLR396C SKM1Q12469 655 aa3.45□□□□□ -1.86
VPS33YLR396C SMC6Q12749 1114 aa3.45□□□□□ -1.86
VPS33YLR396C TY1B-AO13527 1196 aaKnown RBP3.44□□□□□ -1.86
VPS33YLR396C YER190C-BP0CX94 160 aa3.44□□□□□ -1.86
VPS33YLR396C YEL077W-AP0CX95 160 aa3.44□□□□□ -1.86
VPS33YLR396C YGR296C-BP0CX96 160 aa3.44□□□□□ -1.86
VPS33YLR396C YPL283W-BP0CX97 160 aa3.44□□□□□ -1.86
VPS33YLR396C YPR204C-AP0CX98 160 aa3.44□□□□□ -1.86
VPS33YLR396C CDC24P11433 854 aaPredicted RBP3.44□□□□□ -1.86
VPS33YLR396C STE50P25344 346 aa3.44□□□□□ -1.86
VPS33YLR396C YJR079WP47126 109 aa3.44□□□□□ -1.86
VPS33YLR396C UPF3P48412 387 aaKnown RBP3.44□□□□□ -1.86
VPS33YLR396C CAF130P53280 1122 aaPredicted RBP3.44□□□□□ -1.86
VPS33YLR396C IST1P53843 298 aaPredicted RBP3.44□□□□□ -1.86
VPS33YLR396C RAD30Q04049 632 aa3.44□□□□□ -1.86
VPS33YLR396C YLR049CQ12110 428 aa3.44□□□□□ -1.86
VPS33YLR396C NFI1Q12216 726 aa3.44□□□□□ -1.86
VPS33YLR396C PMR1P13586 950 aa3.43□□□□□ -1.86
VPS33YLR396C PDB1P32473 366 aaKnown RBP3.43□□□□□ -1.86
VPS33YLR396C NOC2P39744 710 aaKnown RBP3.43□□□□□ -1.86
VPS33YLR396C NOP16P40007 231 aaKnown RBP3.43□□□□□ -1.86
VPS33YLR396C LYS14P40971 790 aa3.43□□□□□ -1.86
VPS33YLR396C MAL13P53338 473 aa3.43□□□□□ -1.86
VPS33YLR396C SEC5P89102 971 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms