RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W PRO3P32263 286 aaKnown RBP3.41□□□□□ -1.86
PRE1YER012W SAC1P32368 623 aaKnown RBP3.41□□□□□ -1.86
PRE1YER012W PFF1P38244 976 aa3.41□□□□□ -1.86
PRE1YER012W YIL060WP40519 144 aa3.41□□□□□ -1.86
PRE1YER012W PAP2P53632 584 aaKnown RBP3.41□□□□□ -1.86
PRE1YER012W FCP1Q03254 732 aa3.41□□□□□ -1.86
PRE1YER012W RMT2Q03305 412 aa3.41□□□□□ -1.86
PRE1YER012W RSF1Q05043 376 aa3.41□□□□□ -1.86
PRE1YER012W FLO11P08640 1367 aa3.4□□□□□ -1.86
PRE1YER012W DUR1,2P32528 1835 aaKnown RBP3.4□□□□□ -1.86
PRE1YER012W LPD1P09624 499 aaKnown RBP3.4□□□□□ -1.87
PRE1YER012W PGI1P12709 554 aaKnown RBP3.4□□□□□ -1.87
PRE1YER012W SOF1P33750 489 aaKnown RBP3.4□□□□□ -1.87
PRE1YER012W MRX1P40050 688 aa3.4□□□□□ -1.87
PRE1YER012W RPT2P40327 437 aaKnown RBP3.4□□□□□ -1.87
PRE1YER012W YIR014WP40570 242 aa3.4□□□□□ -1.87
PRE1YER012W GSC2P40989 1895 aa3.4□□□□□ -1.87
PRE1YER012W IAH1P41734 238 aa3.4□□□□□ -1.87
PRE1YER012W ERO1Q03103 563 aa3.4□□□□□ -1.87
PRE1YER012W MLC2Q06580 163 aa3.4□□□□□ -1.87
PRE1YER012W COX17Q12287 69 aa3.4□□□□□ -1.87
PRE1YER012W YBR298C-AQ8TGK4 73 aa3.4□□□□□ -1.87
PRE1YER012W NCP1P16603 691 aaKnown RBP3.39□□□□□ -1.87
PRE1YER012W ECM10P39987 644 aa3.39□□□□□ -1.87
PRE1YER012W TAN1P53072 289 aaPredicted RBP3.39□□□□□ -1.87
PRE1YER012W PKP2P53170 491 aa3.39□□□□□ -1.87
PRE1YER012W RSM28Q03430 361 aa3.39□□□□□ -1.87
PRE1YER012W CLB2P24869 491 aa3.38□□□□□ -1.87
PRE1YER012W YHR218WP38899 603 aa3.38□□□□□ -1.87
PRE1YER012W YFR016CP43597 1233 aaKnown RBP3.38□□□□□ -1.87
PRE1YER012W ROK1P45818 564 aaPredicted RBP3.38□□□□□ -1.87
PRE1YER012W VPS4P52917 437 aa3.38□□□□□ -1.87
PRE1YER012W NUP100Q02629 959 aa3.38□□□□□ -1.87
PRE1YER012W RTT109Q07794 436 aa3.38□□□□□ -1.87
PRE1YER012W YOL057WQ08225 711 aa3.38□□□□□ -1.87
PRE1YER012W TMA16Q08687 178 aa3.38□□□□□ -1.87
PRE1YER012W RSA1Q08932 381 aa3.38□□□□□ -1.87
PRE1YER012W VPS13Q07878 3144 aa3.37□□□□□ -1.87
PRE1YER012W GID7P25569 745 aa3.37□□□□□ -1.87
PRE1YER012W NUP120P35729 1037 aa3.37□□□□□ -1.87
PRE1YER012W AAP1P37898 856 aaKnown RBP3.37□□□□□ -1.87
PRE1YER012W GRX7P38068 203 aa3.37□□□□□ -1.87
PRE1YER012W ERG7P38604 731 aa3.37□□□□□ -1.87
PRE1YER012W DED81P38707 554 aaKnown RBP3.37□□□□□ -1.87
PRE1YER012W SPL2P38839 148 aa3.37□□□□□ -1.87
PRE1YER012W SHC1P39000 512 aa3.37□□□□□ -1.87
PRE1YER012W VPS27P40343 622 aaKnown RBP3.37□□□□□ -1.87
PRE1YER012W COG1P53079 417 aa3.37□□□□□ -1.87
PRE1YER012W MRS3P10566 314 aa3.36□□□□□ -1.87
PRE1YER012W SPO16P17122 198 aa3.36□□□□□ -1.87
PRE1YER012W PRD1P25375 712 aa3.36□□□□□ -1.87
PRE1YER012W YIL089WP40500 205 aa3.36□□□□□ -1.87
PRE1YER012W MPP10P47083 593 aaKnown RBP3.36□□□□□ -1.87
PRE1YER012W HEF3P53978 1044 aaKnown RBP3.36□□□□□ -1.87
PRE1YER012W TMA64Q04600 565 aaKnown RBP3.36□□□□□ -1.87
PRE1YER012W SWI1P09547 1314 aa3.36□□□□□ -1.87
PRE1YER012W TY2A-LR1P0C2J4 438 aa3.35□□□□□ -1.87
PRE1YER012W TY2A-FP0CX61 438 aa3.35□□□□□ -1.87
PRE1YER012W TY2A-GR2P0CX62 438 aa3.35□□□□□ -1.87
PRE1YER012W TY2A-CP25383 438 aa3.35□□□□□ -1.87
PRE1YER012W CPR3P25719 182 aa3.35□□□□□ -1.87
PRE1YER012W PTP2P29461 750 aa3.35□□□□□ -1.87
PRE1YER012W YHL041WP38730 149 aa3.35□□□□□ -1.87
PRE1YER012W RTS1P38903 757 aa3.35□□□□□ -1.87
PRE1YER012W RTR1P40084 226 aaPredicted RBP3.35□□□□□ -1.87
PRE1YER012W YJL068CP40363 299 aa3.35□□□□□ -1.87
PRE1YER012W NNF2P53253 936 aa3.35□□□□□ -1.87
PRE1YER012W RTS3P53289 263 aa3.35□□□□□ -1.87
PRE1YER012W YNL050CP53952 270 aa3.35□□□□□ -1.87
PRE1YER012W TRM44Q02648 567 aaKnown RBP3.35□□□□□ -1.87
PRE1YER012W TY2A-DR2Q03483 438 aa3.35□□□□□ -1.87
PRE1YER012W SSP2Q08646 371 aa3.35□□□□□ -1.87
PRE1YER012W TY2A-BQ12260 438 aa3.35□□□□□ -1.87
PRE1YER012W TY2A-OR2Q12293 438 aa3.35□□□□□ -1.87
PRE1YER012W TY2A-DR1Q12392 438 aa3.35□□□□□ -1.87
PRE1YER012W TY2A-OR1Q12439 438 aa3.35□□□□□ -1.87
PRE1YER012W TY2A-DR3Q99303 438 aa3.35□□□□□ -1.87
PRE1YER012W POM152P39685 1337 aa3.35□□□□□ -1.87
PRE1YER012W ATS1P31386 333 aa3.34□□□□□ -1.87
PRE1YER012W ERG1P32476 496 aaKnown RBP3.34□□□□□ -1.87
PRE1YER012W YER130CP39959 443 aa3.34□□□□□ -1.87
PRE1YER012W PSF2P40359 213 aa3.34□□□□□ -1.87
PRE1YER012W RPT4P53549 437 aaKnown RBP3.34□□□□□ -1.87
PRE1YER012W SYF1Q04048 859 aaPredicted RBP3.34□□□□□ -1.87
PRE1YER012W FMP45Q07651 309 aa3.34□□□□□ -1.87
PRE1YER012W KRS1P15180 591 aaKnown RBP3.33□□□□□ -1.88
PRE1YER012W KRE2P27809 442 aa3.33□□□□□ -1.88
PRE1YER012W GUF1P46943 645 aa3.33□□□□□ -1.88
PRE1YER012W CSL4P53859 292 aaPredicted RBP3.33□□□□□ -1.88
PRE1YER012W ADE13Q05911 482 aaKnown RBP3.33□□□□□ -1.88
PRE1YER012W TPK1P06244 397 aa3.32□□□□□ -1.88
PRE1YER012W APA1P16550 321 aaKnown RBP3.32□□□□□ -1.88
PRE1YER012W HPR1P17629 752 aaKnown RBP3.32□□□□□ -1.88
PRE1YER012W LCB1P25045 558 aaKnown RBP3.32□□□□□ -1.88
PRE1YER012W BUD14P27637 709 aa3.32□□□□□ -1.88
PRE1YER012W MCM4P30665 933 aaKnown RBP3.32□□□□□ -1.88
PRE1YER012W SRB5P32585 307 aa3.32□□□□□ -1.88
PRE1YER012W IFA38P38286 347 aa3.32□□□□□ -1.88
PRE1YER012W ARP1P38696 384 aa3.32□□□□□ -1.88
PRE1YER012W FAF1P40546 346 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms