RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W GIS1Q03833 894 aa6.03□□□□□ -1.44
TRP1YDR007W VPS38Q05919 439 aa6.03□□□□□ -1.44
TRP1YDR007W YDL144CQ07589 356 aa6.03□□□□□ -1.44
TRP1YDR007W LEA1Q08963 238 aaPredicted RBP6.03□□□□□ -1.44
TRP1YDR007W EST1P17214 699 aaPredicted RBP6.02□□□□□ -1.45
TRP1YDR007W SAT4P25333 603 aaKnown RBP6.02□□□□□ -1.45
TRP1YDR007W ADH7P25377 361 aa6.02□□□□□ -1.45
TRP1YDR007W GPI10P30777 616 aa6.02□□□□□ -1.45
TRP1YDR007W ADE17P38009 592 aaKnown RBP6.02□□□□□ -1.45
TRP1YDR007W VID24P38263 362 aa6.02□□□□□ -1.45
TRP1YDR007W DIA4P38705 446 aaPredicted RBP6.02□□□□□ -1.45
TRP1YDR007W SMF1P38925 575 aa6.02□□□□□ -1.45
TRP1YDR007W CCT6P39079 546 aa6.02□□□□□ -1.45
TRP1YDR007W EXO1P39875 702 aa6.02□□□□□ -1.45
TRP1YDR007W RSM25P40496 264 aa6.02□□□□□ -1.45
TRP1YDR007W IAH1P41734 238 aa6.02□□□□□ -1.45
TRP1YDR007W RPN11P43588 306 aaKnown RBP6.02□□□□□ -1.45
TRP1YDR007W DPB11P47027 764 aaPredicted RBP6.02□□□□□ -1.45
TRP1YDR007W GND2P53319 492 aa6.02□□□□□ -1.45
TRP1YDR007W JJJ1P53863 590 aa6.02□□□□□ -1.45
TRP1YDR007W LUC7Q07508 261 aaPredicted RBP6.02□□□□□ -1.45
TRP1YDR007W FMP40Q08968 688 aaPredicted RBP6.02□□□□□ -1.45
TRP1YDR007W MRH1Q12117 320 aaPredicted RBP6.02□□□□□ -1.45
TRP1YDR007W GLE1Q12315 538 aa6.02□□□□□ -1.45
TRP1YDR007W ROM2P51862 1356 aaKnown RBP6.02□□□□□ -1.45
TRP1YDR007W RTC1Q08281 1341 aa6.01□□□□□ -1.45
TRP1YDR007W YBT1P32386 1661 aa6.01□□□□□ -1.45
TRP1YDR007W PDR12Q02785 1511 aa6.01□□□□□ -1.45
TRP1YDR007W HEM1P09950 548 aaPredicted RBP6.01□□□□□ -1.45
TRP1YDR007W HSP104P31539 908 aaKnown RBP6.01□□□□□ -1.45
TRP1YDR007W PUP2P32379 260 aa6.01□□□□□ -1.45
TRP1YDR007W EFB1P32471 206 aaKnown RBP6.01□□□□□ -1.45
TRP1YDR007W UGP1P32861 499 aaKnown RBP6.01□□□□□ -1.45
TRP1YDR007W MNN2P38069 597 aa6.01□□□□□ -1.45
TRP1YDR007W SGN1P40561 250 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
TRP1YDR007W IRC24P40580 263 aa6.01□□□□□ -1.45
TRP1YDR007W DIA3P52290 468 aa6.01□□□□□ -1.45
TRP1YDR007W YDR239CQ03780 787 aa6.01□□□□□ -1.45
TRP1YDR007W CYK3Q07533 885 aa6.01□□□□□ -1.45
TRP1YDR007W ISA2Q12425 185 aa6.01□□□□□ -1.45
TRP1YDR007W AVL9Q12500 764 aa6.01□□□□□ -1.45
TRP1YDR007W MF(ALPHA)1P01149 165 aa6□□□□□ -1.45
TRP1YDR007W SEC14P24280 304 aaKnown RBP6□□□□□ -1.45
TRP1YDR007W AAD3P25612 363 aa6□□□□□ -1.45
TRP1YDR007W OAR1P35731 278 aa6□□□□□ -1.45
TRP1YDR007W MOH1P38191 138 aa6□□□□□ -1.45
TRP1YDR007W UIP3P39547 235 aa6□□□□□ -1.45
TRP1YDR007W MAF1P41910 395 aa6□□□□□ -1.45
TRP1YDR007W ZDS2P54786 942 aa6□□□□□ -1.45
TRP1YDR007W RCF1Q03713 159 aa6□□□□□ -1.45
TRP1YDR007W ORM2Q06144 216 aa6□□□□□ -1.45
TRP1YDR007W INP53Q12271 1107 aa6□□□□□ -1.45
TRP1YDR007W YML133CQ03099 1374 aa6□□□□□ -1.45
TRP1YDR007W YLL067CQ07888 1374 aa6□□□□□ -1.45
TRP1YDR007W YLL066CQ99208 1374 aa6□□□□□ -1.45
TRP1YDR007W GAL80P04387 435 aa5.99□□□□□ -1.45
TRP1YDR007W SUI2P20459 304 aaKnown RBP5.99□□□□□ -1.45
TRP1YDR007W RPC34P32910 317 aa5.99□□□□□ -1.45
TRP1YDR007W SEF1P34228 1148 aa5.99□□□□□ -1.45
TRP1YDR007W RFC1P38630 861 aaKnown RBP5.99□□□□□ -1.45
TRP1YDR007W YJL068CP40363 299 aa5.99□□□□□ -1.45
TRP1YDR007W PKP1P40530 394 aa5.99□□□□□ -1.45
TRP1YDR007W HST1P53685 503 aa5.99□□□□□ -1.45
TRP1YDR007W CTF4Q01454 927 aa5.99□□□□□ -1.45
TRP1YDR007W MAK10Q02197 733 aa5.99□□□□□ -1.45
TRP1YDR007W ERO1Q03103 563 aa5.99□□□□□ -1.45
TRP1YDR007W YDR131CQ03899 556 aa5.99□□□□□ -1.45
TRP1YDR007W TMN2Q04562 672 aa5.99□□□□□ -1.45
TRP1YDR007W GGA1Q06336 557 aa5.99□□□□□ -1.45
TRP1YDR007W ARO10Q06408 635 aa5.99□□□□□ -1.45
TRP1YDR007W ARR1Q06596 294 aa5.99□□□□□ -1.45
TRP1YDR007W ULA1Q12059 462 aa5.99□□□□□ -1.45
TRP1YDR007W YOL159C-AQ3E769 90 aa5.99□□□□□ -1.45
TRP1YDR007W DNF2Q12675 1612 aa5.99□□□□□ -1.45
TRP1YDR007W RPN13O13563 156 aa5.98□□□□□ -1.45
TRP1YDR007W SPE2P21182 396 aa5.98□□□□□ -1.45
TRP1YDR007W MRPS28P21771 286 aa5.98□□□□□ -1.45
TRP1YDR007W CLB3P24870 427 aa5.98□□□□□ -1.45
TRP1YDR007W YMC1P32331 307 aa5.98□□□□□ -1.45
TRP1YDR007W GSH1P32477 678 aa5.98□□□□□ -1.45
TRP1YDR007W SSE2P32590 693 aaKnown RBP5.98□□□□□ -1.45
TRP1YDR007W EMP70P32802 667 aa5.98□□□□□ -1.45
TRP1YDR007W CST26P38226 397 aa5.98□□□□□ -1.45
TRP1YDR007W PET100P38958 111 aa5.98□□□□□ -1.45
TRP1YDR007W YFR020WP43600 232 aa5.98□□□□□ -1.45
TRP1YDR007W YJL043WP47053 257 aa5.98□□□□□ -1.45
TRP1YDR007W VPS73P53142 486 aaKnown RBP5.98□□□□□ -1.45
TRP1YDR007W RMT2Q03305 412 aa5.98□□□□□ -1.45
TRP1YDR007W RAD34Q06665 692 aa5.98□□□□□ -1.45
TRP1YDR007W NFI1Q12216 726 aa5.98□□□□□ -1.45
TRP1YDR007W YRF1-4O13559 1382 aa5.97□□□□□ -1.45
TRP1YDR007W AUS1Q08409 1394 aa5.97□□□□□ -1.45
TRP1YDR007W BI2P03873 423 aa5.97□□□□□ -1.45
TRP1YDR007W ADE5,7P07244 802 aaKnown RBP5.97□□□□□ -1.45
TRP1YDR007W MRP2P10663 115 aaPredicted RBP5.97□□□□□ -1.45
TRP1YDR007W THR4P16120 514 aaKnown RBP5.97□□□□□ -1.45
TRP1YDR007W PDA1P16387 420 aaKnown RBP5.97□□□□□ -1.45
TRP1YDR007W OPI1P21957 404 aa5.97□□□□□ -1.45
TRP1YDR007W ADK2P26364 225 aa5.97□□□□□ -1.45
TRP1YDR007W DPH5P32469 300 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms