RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W SUP35P05453 685 aaKnown RBP1.45□□□□□ -2.18
CDC36YDL165W PSO2P30620 661 aa1.45□□□□□ -2.18
CDC36YDL165W DEG1P31115 442 aaKnown RBP1.45□□□□□ -2.18
CDC36YDL165W SOF1P33750 489 aaKnown RBP1.45□□□□□ -2.18
CDC36YDL165W PEX5P35056 612 aa1.45□□□□□ -2.18
CDC36YDL165W BLI1P35727 113 aa1.45□□□□□ -2.18
CDC36YDL165W MIA40P36046 403 aa1.45□□□□□ -2.18
CDC36YDL165W TUL1P36096 758 aa1.45□□□□□ -2.18
CDC36YDL165W RPC37P36121 282 aa1.45□□□□□ -2.18
CDC36YDL165W AAP1P37898 856 aaKnown RBP1.45□□□□□ -2.18
CDC36YDL165W IFA38P38286 347 aa1.45□□□□□ -2.18
CDC36YDL165W ARP1P38696 384 aa1.45□□□□□ -2.18
CDC36YDL165W PET100P38958 111 aa1.45□□□□□ -2.18
CDC36YDL165W NOC2P39744 710 aaKnown RBP1.45□□□□□ -2.18
CDC36YDL165W ECM10P39987 644 aa1.45□□□□□ -2.18
CDC36YDL165W PUG1P40100 303 aa1.45□□□□□ -2.18
CDC36YDL165W VPS27P40343 622 aaKnown RBP1.45□□□□□ -2.18
CDC36YDL165W YGL082WP53155 381 aa1.45□□□□□ -2.18
CDC36YDL165W MSO1P53604 210 aaKnown RBP1.45□□□□□ -2.18
CDC36YDL165W JJJ1P53863 590 aa1.45□□□□□ -2.18
CDC36YDL165W BNI5P53890 448 aaKnown RBP1.45□□□□□ -2.18
CDC36YDL165W RRB1Q04225 511 aaKnown RBP1.45□□□□□ -2.18
CDC36YDL165W YMR087WQ04299 284 aa1.45□□□□□ -2.18
CDC36YDL165W CIA1Q05583 330 aa1.45□□□□□ -2.18
CDC36YDL165W PSK2Q08217 1101 aa1.45□□□□□ -2.18
CDC36YDL165W RRG7Q08774 242 aaPredicted RBP1.45□□□□□ -2.18
CDC36YDL165W RDR1Q08904 546 aa1.45□□□□□ -2.18
CDC36YDL165W NFI1Q12216 726 aa1.45□□□□□ -2.18
CDC36YDL165W HSP42Q12329 375 aa1.45□□□□□ -2.18
CDC36YDL165W SKI3P17883 1432 aaKnown RBP1.45□□□□□ -2.18
CDC36YDL165W SGS1P35187 1447 aa1.44□□□□□ -2.18
CDC36YDL165W SEC62P21825 274 aa1.44□□□□□ -2.18
CDC36YDL165W MSM1P22438 575 aa1.44□□□□□ -2.18
CDC36YDL165W CLB1P24868 471 aa1.44□□□□□ -2.18
CDC36YDL165W BRF1P29056 596 aa1.44□□□□□ -2.18
CDC36YDL165W PTP2P29461 750 aa1.44□□□□□ -2.18
CDC36YDL165W ARP2P32381 391 aaKnown RBP1.44□□□□□ -2.18
CDC36YDL165W SAS3P34218 831 aa1.44□□□□□ -2.18
CDC36YDL165W ECM15P35195 104 aa1.44□□□□□ -2.18
CDC36YDL165W NTR2P36118 322 aaPredicted RBP1.44□□□□□ -2.18
CDC36YDL165W GEX2P36173 615 aa1.44□□□□□ -2.18
CDC36YDL165W OPY1P38271 328 aa1.44□□□□□ -2.18
CDC36YDL165W FAF1P40546 346 aaPredicted RBP1.44□□□□□ -2.18
CDC36YDL165W RRT6P53117 311 aaPredicted RBP1.44□□□□□ -2.18
CDC36YDL165W PXR1P53335 271 aaPredicted RBP1.44□□□□□ -2.18
CDC36YDL165W PAP2P53632 584 aaKnown RBP1.44□□□□□ -2.18
CDC36YDL165W ARC35P53731 342 aaKnown RBP1.44□□□□□ -2.18
CDC36YDL165W SAM50P53969 484 aa1.44□□□□□ -2.18
CDC36YDL165W CRN1Q06440 651 aa1.44□□□□□ -2.18
CDC36YDL165W NDL1Q06568 189 aa1.44□□□□□ -2.18
CDC36YDL165W MLC2Q06580 163 aa1.44□□□□□ -2.18
CDC36YDL165W YPR172WQ06608 200 aa1.44□□□□□ -2.18
CDC36YDL165W THI20Q08224 551 aa1.44□□□□□ -2.18
CDC36YDL165W APC5Q08683 685 aa1.44□□□□□ -2.18
CDC36YDL165W TMS1Q12116 473 aa1.44□□□□□ -2.18
CDC36YDL165W SGT2Q12118 346 aaKnown RBP1.44□□□□□ -2.18
CDC36YDL165W RUD3Q12234 484 aaKnown RBP1.44□□□□□ -2.18
CDC36YDL165W BRR1Q99177 341 aaPredicted RBP1.44□□□□□ -2.18
CDC36YDL165W SAC3P46674 1301 aa1.43□□□□□ -2.18
CDC36YDL165W RAD3P06839 778 aa1.43□□□□□ -2.18
CDC36YDL165W CLN3P13365 580 aa1.43□□□□□ -2.18
CDC36YDL165W CLN1P20437 546 aa1.43□□□□□ -2.18
CDC36YDL165W OPI1P21957 404 aa1.43□□□□□ -2.18
CDC36YDL165W CLB4P24871 460 aa1.43□□□□□ -2.18
CDC36YDL165W PWP2P25635 923 aaKnown RBP1.43□□□□□ -2.18
CDC36YDL165W FUN19P28003 413 aaPredicted RBP1.43□□□□□ -2.18
CDC36YDL165W DBF20P32328 564 aa1.43□□□□□ -2.18
CDC36YDL165W HIR2P32480 875 aa1.43□□□□□ -2.18
CDC36YDL165W GCD7P32502 381 aaPredicted RBP1.43□□□□□ -2.18
CDC36YDL165W VPS17P32913 551 aa1.43□□□□□ -2.18
CDC36YDL165W ARC19P33204 171 aaKnown RBP1.43□□□□□ -2.18
CDC36YDL165W YNK1P36010 153 aaKnown RBP1.43□□□□□ -2.18
CDC36YDL165W YKL133CP36066 463 aa1.43□□□□□ -2.18
CDC36YDL165W PMU1P36069 295 aa1.43□□□□□ -2.18
CDC36YDL165W MUM2P38236 366 aa1.43□□□□□ -2.18
CDC36YDL165W TCD1P38756 429 aa1.43□□□□□ -2.18
CDC36YDL165W ERP2P39704 215 aa1.43□□□□□ -2.18
CDC36YDL165W TPM2P40414 161 aa1.43□□□□□ -2.18
CDC36YDL165W BUD27P43573 796 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
CDC36YDL165W RPN11P43588 306 aaKnown RBP1.43□□□□□ -2.18
CDC36YDL165W YFR020WP43600 232 aa1.43□□□□□ -2.18
CDC36YDL165W KEL2P50090 882 aa1.43□□□□□ -2.18
CDC36YDL165W OCA1P50946 238 aaPredicted RBP1.43□□□□□ -2.18
CDC36YDL165W SHE4P51534 789 aa1.43□□□□□ -2.18
CDC36YDL165W DSL1P53847 754 aa1.43□□□□□ -2.18
CDC36YDL165W VPS60Q03390 229 aa1.43□□□□□ -2.18
CDC36YDL165W ERB1Q04660 807 aaKnown RBP1.43□□□□□ -2.18
CDC36YDL165W ADE13Q05911 482 aaKnown RBP1.43□□□□□ -2.18
CDC36YDL165W ATG26Q06321 1198 aa1.43□□□□□ -2.18
CDC36YDL165W SWT1Q12104 458 aa1.43□□□□□ -2.18
CDC36YDL165W RBD2Q12270 262 aa1.43□□□□□ -2.18
CDC36YDL165W ERP4Q12450 207 aa1.43□□□□□ -2.18
CDC36YDL165W CEX1Q12453 761 aa1.43□□□□□ -2.18
CDC36YDL165W CDC31P06704 161 aaKnown RBP1.42□□□□□ -2.18
CDC36YDL165W SIR1P21691 654 aa1.42□□□□□ -2.18
CDC36YDL165W ROX1P25042 368 aa1.42□□□□□ -2.18
CDC36YDL165W SMY1P32364 656 aaKnown RBP1.42□□□□□ -2.18
CDC36YDL165W PUP2P32379 260 aa1.42□□□□□ -2.18
CDC36YDL165W NIP100P33420 868 aa1.42□□□□□ -2.18
CDC36YDL165W PAD1P33751 242 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms