RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W ECM11Q04110 302 aa2.25□□□□□ -2.05
MCD1YDL003W PPN1Q04119 674 aa2.25□□□□□ -2.05
MCD1YDL003W URH1Q04179 340 aa2.25□□□□□ -2.05
MCD1YDL003W URC2Q04411 772 aa2.25□□□□□ -2.05
MCD1YDL003W RRN11Q04712 507 aa2.25□□□□□ -2.05
MCD1YDL003W YMR226CQ05016 267 aaKnown RBP2.25□□□□□ -2.05
MCD1YDL003W DBP9Q06218 594 aaKnown RBP2.25□□□□□ -2.05
MCD1YDL003W ATG33Q06485 197 aa2.25□□□□□ -2.05
MCD1YDL003W HIM1Q06674 414 aa2.25□□□□□ -2.05
MCD1YDL003W VIP1Q06685 1146 aaKnown RBP2.25□□□□□ -2.05
MCD1YDL003W MDM36Q06820 579 aa2.25□□□□□ -2.05
MCD1YDL003W ALE1Q08548 619 aa2.25□□□□□ -2.05
MCD1YDL003W RPN8Q08723 338 aaKnown RBP2.25□□□□□ -2.05
MCD1YDL003W VPS54Q12071 889 aa2.25□□□□□ -2.05
MCD1YDL003W MED4Q12343 284 aa2.25□□□□□ -2.05
MCD1YDL003W DBP10Q12389 995 aaKnown RBP2.25□□□□□ -2.05
MCD1YDL003W SNU66Q12420 587 aaPredicted RBP2.25□□□□□ -2.05
MCD1YDL003W RMP1Q12530 201 aa2.25□□□□□ -2.05
MCD1YDL003W YBL111CQ3E7Y5 667 aa2.25□□□□□ -2.05
MCD1YDL003W USO1P25386 1790 aa2.25□□□□□ -2.05
MCD1YDL003W ILS1P09436 1072 aaKnown RBP2.24□□□□□ -2.05
MCD1YDL003W MATALPHA2P0CY08 210 aa2.24□□□□□ -2.05
MCD1YDL003W HMLALPHA2P0CY09 210 aa2.24□□□□□ -2.05
MCD1YDL003W SPO12P17123 173 aa2.24□□□□□ -2.05
MCD1YDL003W KGD2P19262 463 aaPredicted RBP2.24□□□□□ -2.05
MCD1YDL003W RNR3P21672 869 aaKnown RBP2.24□□□□□ -2.05
MCD1YDL003W MEI4P29467 408 aa2.24□□□□□ -2.05
MCD1YDL003W RAD24P32641 659 aa2.24□□□□□ -2.05
MCD1YDL003W PEX6P33760 1030 aa2.24□□□□□ -2.05
MCD1YDL003W YET1P35723 206 aa2.24□□□□□ -2.05
MCD1YDL003W MRX3P38172 270 aa2.24□□□□□ -2.05
MCD1YDL003W STP2P38704 541 aa2.24□□□□□ -2.05
MCD1YDL003W SEC31P38968 1273 aaKnown RBP2.24□□□□□ -2.05
MCD1YDL003W OAF1P39720 1047 aaPredicted RBP2.24□□□□□ -2.05
MCD1YDL003W YIR016WP40572 265 aa2.24□□□□□ -2.05
MCD1YDL003W DIM1P41819 318 aaKnown RBP2.24□□□□□ -2.05
MCD1YDL003W TAF6P53040 516 aa2.24□□□□□ -2.05
MCD1YDL003W YGL260WP53056 76 aa2.24□□□□□ -2.05
MCD1YDL003W YGL108CP53139 140 aa2.24□□□□□ -2.05
MCD1YDL003W YGR111WP53265 400 aa2.24□□□□□ -2.05
MCD1YDL003W RTS3P53289 263 aa2.24□□□□□ -2.05
MCD1YDL003W ESBP6P53918 673 aa2.24□□□□□ -2.05
MCD1YDL003W SNZ1Q03148 297 aa2.24□□□□□ -2.05
MCD1YDL003W NSE3Q05541 303 aa2.24□□□□□ -2.05
MCD1YDL003W HEL2Q05580 639 aaKnown RBP2.24□□□□□ -2.05
MCD1YDL003W COA4Q05809 96 aa2.24□□□□□ -2.05
MCD1YDL003W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
MCD1YDL003W PCL8Q08966 492 aa2.24□□□□□ -2.05
MCD1YDL003W FAP7Q12055 197 aaPredicted RBP2.24□□□□□ -2.05
MCD1YDL003W YLR111WQ12528 110 aa2.24□□□□□ -2.05
MCD1YDL003W YOR093CQ12275 1648 aa2.24□□□□□ -2.05
MCD1YDL003W PDR12Q02785 1511 aa2.24□□□□□ -2.05
MCD1YDL003W TEF1P02994 458 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W PIF1P07271 859 aa2.23□□□□□ -2.05
MCD1YDL003W SSB1P11484 613 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W MRP7P12687 371 aa2.23□□□□□ -2.05
MCD1YDL003W ATR1P13090 542 aa2.23□□□□□ -2.05
MCD1YDL003W PFK2P16862 959 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
MCD1YDL003W SPO16P17122 198 aa2.23□□□□□ -2.05
MCD1YDL003W DBP3P20447 523 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W PHO3P24031 467 aa2.23□□□□□ -2.05
MCD1YDL003W OCA4P25366 362 aa2.23□□□□□ -2.05
MCD1YDL003W RME1P32338 300 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W IMP2'P32351 346 aa2.23□□□□□ -2.05
MCD1YDL003W PLC1P32383 869 aa2.23□□□□□ -2.05
MCD1YDL003W SSE2P32590 693 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W YME1P32795 747 aa2.23□□□□□ -2.05
MCD1YDL003W MRS6P32864 603 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W MIA40P36046 403 aa2.23□□□□□ -2.05
MCD1YDL003W RFS1P38234 210 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W APE4P38821 490 aa2.23□□□□□ -2.05
MCD1YDL003W LSM12P38828 187 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W RTS1P38903 757 aa2.23□□□□□ -2.05
MCD1YDL003W NPT1P39683 429 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W MTW1P39731 289 aa2.23□□□□□ -2.05
MCD1YDL003W SSB2P40150 613 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W YTA12P40341 825 aa2.23□□□□□ -2.05
MCD1YDL003W FAF1P40546 346 aaPredicted RBP2.23□□□□□ -2.05
MCD1YDL003W FAR7P43592 221 aa2.23□□□□□ -2.05
MCD1YDL003W EMC2P47133 292 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W SSN8P47821 323 aa2.23□□□□□ -2.05
MCD1YDL003W MRPL50P53724 139 aa2.23□□□□□ -2.05
MCD1YDL003W UME1Q03010 460 aa2.23□□□□□ -2.05
MCD1YDL003W FDC1Q03034 503 aa2.23□□□□□ -2.05
MCD1YDL003W NGL3Q03210 505 aa2.23□□□□□ -2.05
MCD1YDL003W ACL4Q03771 387 aa2.23□□□□□ -2.05
MCD1YDL003W BUD22Q04347 519 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W YMR018WQ04364 514 aa2.23□□□□□ -2.05
MCD1YDL003W SOV1Q04748 898 aa2.23□□□□□ -2.05
MCD1YDL003W BCP1Q06338 283 aa2.23□□□□□ -2.05
MCD1YDL003W YLR001CQ07895 862 aa2.23□□□□□ -2.05
MCD1YDL003W TRM8Q12009 286 aa2.23□□□□□ -2.05
MCD1YDL003W RTC5Q12108 567 aaKnown RBP2.23□□□□□ -2.05
MCD1YDL003W GET4Q12125 312 aa2.23□□□□□ -2.05
MCD1YDL003W ADF1Q2V2Q1 113 aa2.23□□□□□ -2.05
MCD1YDL003W APM4Q99186 491 aa2.23□□□□□ -2.05
MCD1YDL003W YPT6Q99260 215 aa2.23□□□□□ -2.05
MCD1YDL003W DOP1Q03921 1698 aa2.23□□□□□ -2.05
MCD1YDL003W TUS1Q06412 1307 aa2.23□□□□□ -2.05
MCD1YDL003W MF(ALPHA)1P01149 165 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms