RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W GDI1P39958 451 aaKnown RBP2.27□□□□□ -2.05
RRP6YOR001W CDC1P40986 491 aa2.27□□□□□ -2.05
RRP6YOR001W SSU1P41930 458 aa2.27□□□□□ -2.05
RRP6YOR001W TDA10P42938 290 aa2.27□□□□□ -2.05
RRP6YOR001W YJL107CP42947 387 aa2.27□□□□□ -2.05
RRP6YOR001W YFL015CP43578 164 aa2.27□□□□□ -2.05
RRP6YOR001W OCA1P50946 238 aaPredicted RBP2.27□□□□□ -2.05
RRP6YOR001W VID30P53076 958 aa2.27□□□□□ -2.05
RRP6YOR001W YGL117WP53133 265 aa2.27□□□□□ -2.05
RRP6YOR001W TWF1P53250 332 aa2.27□□□□□ -2.05
RRP6YOR001W KTR5P53966 522 aaPredicted RBP2.27□□□□□ -2.05
RRP6YOR001W KIN4Q01919 800 aa2.27□□□□□ -2.05
RRP6YOR001W YDR109CQ04585 715 aa2.27□□□□□ -2.05
RRP6YOR001W RSF1Q05043 376 aa2.27□□□□□ -2.05
RRP6YOR001W RRP9Q06506 573 aaKnown RBP2.27□□□□□ -2.05
RRP6YOR001W CRT10Q08226 957 aa2.27□□□□□ -2.05
RRP6YOR001W YOL073CQ08232 322 aa2.27□□□□□ -2.05
RRP6YOR001W SPE3Q12074 293 aaKnown RBP2.27□□□□□ -2.05
RRP6YOR001W LYS21Q12122 440 aaKnown RBP2.27□□□□□ -2.05
RRP6YOR001W NFI1Q12216 726 aa2.27□□□□□ -2.05
RRP6YOR001W GPM3Q12326 303 aa2.27□□□□□ -2.05
RRP6YOR001W CHO1P08456 276 aa2.27□□□□□ -2.05
RRP6YOR001W SWH1P35845 1188 aa2.27□□□□□ -2.05
RRP6YOR001W RPF2P36160 344 aaKnown RBP2.27□□□□□ -2.05
RRP6YOR001W NUP133P36161 1157 aa2.27□□□□□ -2.05
RRP6YOR001W ADH5P38113 351 aaKnown RBP2.27□□□□□ -2.05
RRP6YOR001W RRT2P38332 387 aa2.27□□□□□ -2.05
RRP6YOR001W ELO1P39540 310 aa2.27□□□□□ -2.05
RRP6YOR001W FUN12P39730 1002 aaKnown RBP2.27□□□□□ -2.05
RRP6YOR001W NDC80P40460 691 aa2.27□□□□□ -2.05
RRP6YOR001W DLD2P46681 530 aaKnown RBP2.27□□□□□ -2.05
RRP6YOR001W SAE2P46946 345 aa2.27□□□□□ -2.05
RRP6YOR001W FYV8P46949 817 aaKnown RBP2.27□□□□□ -2.05
RRP6YOR001W ECM27P47144 725 aa2.27□□□□□ -2.05
RRP6YOR001W ART5P53244 586 aaKnown RBP2.27□□□□□ -2.05
RRP6YOR001W COQ6P53318 479 aa2.27□□□□□ -2.05
RRP6YOR001W DCP2P53550 970 aaKnown RBP2.27□□□□□ -2.05
RRP6YOR001W MUK1Q02866 612 aa2.27□□□□□ -2.05
RRP6YOR001W PLM2Q04383 521 aa2.27□□□□□ -2.05
RRP6YOR001W COQ9Q05779 260 aa2.27□□□□□ -2.05
RRP6YOR001W FMP40Q08968 688 aaPredicted RBP2.27□□□□□ -2.05
RRP6YOR001W TGS1Q12052 315 aa2.27□□□□□ -2.05
RRP6YOR001W INP53Q12271 1107 aa2.27□□□□□ -2.05
RRP6YOR001W TAF3Q12297 353 aa2.27□□□□□ -2.05
RRP6YOR001W SEC39Q12745 709 aa2.27□□□□□ -2.05
RRP6YOR001W AFI1Q99222 893 aa2.27□□□□□ -2.05
RRP6YOR001W MF(ALPHA)1P01149 165 aa2.26□□□□□ -2.05
RRP6YOR001W TPK2P06245 380 aa2.26□□□□□ -2.05
RRP6YOR001W REC107P21651 314 aa2.26□□□□□ -2.05
RRP6YOR001W APN1P22936 367 aa2.26□□□□□ -2.05
RRP6YOR001W ADH7P25377 361 aa2.26□□□□□ -2.05
RRP6YOR001W GEX1P25596 615 aa2.26□□□□□ -2.05
RRP6YOR001W MGM1P32266 881 aa2.26□□□□□ -2.05
RRP6YOR001W RML2P32611 393 aa2.26□□□□□ -2.05
RRP6YOR001W UGP1P32861 499 aaKnown RBP2.26□□□□□ -2.05
RRP6YOR001W GMH1P36125 273 aa2.26□□□□□ -2.05
RRP6YOR001W PIM1P36775 1133 aa2.26□□□□□ -2.05
RRP6YOR001W KEL1P38853 1164 aaKnown RBP2.26□□□□□ -2.05
RRP6YOR001W LNP1P38878 278 aa2.26□□□□□ -2.05
RRP6YOR001W MEP1P40260 492 aa2.26□□□□□ -2.05
RRP6YOR001W PKP1P40530 394 aa2.26□□□□□ -2.05
RRP6YOR001W HXT14P42833 540 aa2.26□□□□□ -2.05
RRP6YOR001W FET5P43561 622 aa2.26□□□□□ -2.05
RRP6YOR001W CAK1P43568 368 aaPredicted RBP2.26□□□□□ -2.05
RRP6YOR001W RPS10BP46784 105 aaKnown RBP2.26□□□□□ -2.05
RRP6YOR001W DPB11P47027 764 aaPredicted RBP2.26□□□□□ -2.05
RRP6YOR001W YJL055WP47044 245 aa2.26□□□□□ -2.05
RRP6YOR001W YPR003CP53394 754 aa2.26□□□□□ -2.05
RRP6YOR001W YMR160WQ03823 816 aa2.26□□□□□ -2.05
RRP6YOR001W BUD22Q04347 519 aaKnown RBP2.26□□□□□ -2.05
RRP6YOR001W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
RRP6YOR001W ETT1Q08421 412 aaKnown RBP2.26□□□□□ -2.05
RRP6YOR001W RPS10AQ08745 105 aaPredicted RBP2.26□□□□□ -2.05
RRP6YOR001W UAF30Q08747 228 aa2.26□□□□□ -2.05
RRP6YOR001W RPN5Q12250 445 aaKnown RBP2.26□□□□□ -2.05
RRP6YOR001W HSP42Q12329 375 aa2.26□□□□□ -2.05
RRP6YOR001W RRD2Q12461 358 aa2.26□□□□□ -2.05
RRP6YOR001W FRE6Q12473 712 aa2.26□□□□□ -2.05
RRP6YOR001W WHI2P12611 486 aa2.26□□□□□ -2.05
RRP6YOR001W PDA1P16387 420 aaKnown RBP2.26□□□□□ -2.05
RRP6YOR001W DAP2P18962 818 aa2.26□□□□□ -2.05
RRP6YOR001W VMA16P23968 213 aa2.26□□□□□ -2.05
RRP6YOR001W IDH2P28241 369 aaKnown RBP2.26□□□□□ -2.05
RRP6YOR001W SIP1P32578 815 aa2.26□□□□□ -2.05
RRP6YOR001W LTV1P34078 463 aa2.26□□□□□ -2.05
RRP6YOR001W YBR144CP34215 104 aa2.26□□□□□ -2.05
RRP6YOR001W SEF1P34228 1148 aa2.26□□□□□ -2.05
RRP6YOR001W APE3P37302 537 aaKnown RBP2.26□□□□□ -2.05
RRP6YOR001W ADE17P38009 592 aaKnown RBP2.26□□□□□ -2.05
RRP6YOR001W SIF2P38262 535 aa2.26□□□□□ -2.05
RRP6YOR001W SER3P40054 469 aa2.26□□□□□ -2.05
RRP6YOR001W BUR6P40096 142 aa2.26□□□□□ -2.05
RRP6YOR001W STB2P46679 850 aa2.26□□□□□ -2.05
RRP6YOR001W SMC3P47037 1230 aa2.26□□□□□ -2.05
RRP6YOR001W AIM22P47051 409 aa2.26□□□□□ -2.05
RRP6YOR001W DRN1P53255 507 aaKnown RBP2.26□□□□□ -2.05
RRP6YOR001W COG2P53271 262 aa2.26□□□□□ -2.05
RRP6YOR001W IST1P53843 298 aaPredicted RBP2.26□□□□□ -2.05
RRP6YOR001W EOS1P53938 366 aa2.26□□□□□ -2.05
RRP6YOR001W CTF4Q01454 927 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms