RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W VMA16P23968 213 aa3.44□□□□□ -1.86
SRP1YNL189W SGF29P25554 259 aa3.44□□□□□ -1.86
SRP1YNL189W YBR225WP38321 900 aa3.44□□□□□ -1.86
SRP1YNL189W UIP3P39547 235 aa3.44□□□□□ -1.86
SRP1YNL189W MAF1P41910 395 aa3.44□□□□□ -1.86
SRP1YNL189W VPS25P47142 202 aa3.44□□□□□ -1.86
SRP1YNL189W DIA3P52290 468 aa3.44□□□□□ -1.86
SRP1YNL189W PKP2P53170 491 aa3.44□□□□□ -1.86
SRP1YNL189W GRC3Q07845 632 aa3.44□□□□□ -1.86
SRP1YNL189W AFT2Q08957 416 aa3.44□□□□□ -1.86
SRP1YNL189W CBP1P07252 654 aa3.43□□□□□ -1.86
SRP1YNL189W SAC6P32599 642 aaKnown RBP3.43□□□□□ -1.86
SRP1YNL189W NAB3P38996 802 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
SRP1YNL189W CCT6P39079 546 aa3.43□□□□□ -1.86
SRP1YNL189W ERP2P39704 215 aa3.43□□□□□ -1.86
SRP1YNL189W NPR2P39923 615 aa3.43□□□□□ -1.86
SRP1YNL189W VRG4P40107 337 aa3.43□□□□□ -1.86
SRP1YNL189W NDE1P40215 560 aa3.43□□□□□ -1.86
SRP1YNL189W SCW4P53334 386 aaKnown RBP3.43□□□□□ -1.86
SRP1YNL189W VTC3Q02725 835 aa3.43□□□□□ -1.86
SRP1YNL189W YMR178WQ03219 274 aaKnown RBP3.43□□□□□ -1.86
SRP1YNL189W DPB4Q04603 196 aaKnown RBP3.43□□□□□ -1.86
SRP1YNL189W ARP9Q05123 467 aa3.43□□□□□ -1.86
SRP1YNL189W NMD4Q12129 218 aa3.43□□□□□ -1.86
SRP1YNL189W RGT2Q12300 763 aa3.43□□□□□ -1.86
SRP1YNL189W EDE1P34216 1381 aa3.43□□□□□ -1.86
SRP1YNL189W SEC53P07283 254 aaKnown RBP3.42□□□□□ -1.86
SRP1YNL189W MRP13P12686 339 aa3.42□□□□□ -1.86
SRP1YNL189W YKL050CP35736 922 aa3.42□□□□□ -1.86
SRP1YNL189W TSC10P38342 320 aa3.42□□□□□ -1.86
SRP1YNL189W FLC2P39719 783 aa3.42□□□□□ -1.86
SRP1YNL189W YIR016WP40572 265 aa3.42□□□□□ -1.86
SRP1YNL189W SMC3P47037 1230 aa3.42□□□□□ -1.86
SRP1YNL189W IRC8P47046 822 aa3.42□□□□□ -1.86
SRP1YNL189W GLO1P50107 326 aa3.42□□□□□ -1.86
SRP1YNL189W MFB1Q04922 465 aa3.42□□□□□ -1.86
SRP1YNL189W ATG26Q06321 1198 aa3.42□□□□□ -1.86
SRP1YNL189W YDL218WQ07629 317 aa3.42□□□□□ -1.86
SRP1YNL189W TEN1Q07921 160 aa3.42□□□□□ -1.86
SRP1YNL189W SDH5Q08230 162 aa3.42□□□□□ -1.86
SRP1YNL189W APL4Q12028 832 aa3.42□□□□□ -1.86
SRP1YNL189W NOP58Q12499 511 aaKnown RBP3.42□□□□□ -1.86
SRP1YNL189W EST1P17214 699 aaPredicted RBP3.41□□□□□ -1.86
SRP1YNL189W CMK1P27466 446 aaKnown RBP3.41□□□□□ -1.86
SRP1YNL189W MGM1P32266 881 aa3.41□□□□□ -1.86
SRP1YNL189W TIF3P34167 436 aaKnown RBP3.41□□□□□ -1.86
SRP1YNL189W ASK1P35734 292 aa3.41□□□□□ -1.86
SRP1YNL189W UBP11P36026 717 aa3.41□□□□□ -1.86
SRP1YNL189W AGP2P38090 596 aa3.41□□□□□ -1.86
SRP1YNL189W AFG3P39925 761 aa3.41□□□□□ -1.86
SRP1YNL189W RGI2P40188 164 aa3.41□□□□□ -1.86
SRP1YNL189W PCI8P40512 444 aa3.41□□□□□ -1.86
SRP1YNL189W MDV1P47025 714 aa3.41□□□□□ -1.86
SRP1YNL189W VPS75P53853 264 aa3.41□□□□□ -1.86
SRP1YNL189W ESBP6P53918 673 aa3.41□□□□□ -1.86
SRP1YNL189W BUD22Q04347 519 aaKnown RBP3.41□□□□□ -1.86
SRP1YNL189W EMI2Q04409 500 aaKnown RBP3.41□□□□□ -1.86
SRP1YNL189W UTP21Q06078 939 aaPredicted RBP3.41□□□□□ -1.86
SRP1YNL189W MCP2Q06567 569 aa3.41□□□□□ -1.86
SRP1YNL189W LUC7Q07508 261 aaPredicted RBP3.41□□□□□ -1.86
SRP1YNL189W BUD7Q08754 746 aa3.41□□□□□ -1.86
SRP1YNL189W SNF3P10870 884 aa3.41□□□□□ -1.86
SRP1YNL189W ADH7P25377 361 aa3.41□□□□□ -1.86
SRP1YNL189W YIH1P25637 258 aa3.41□□□□□ -1.86
SRP1YNL189W PEP3P27801 918 aa3.41□□□□□ -1.86
SRP1YNL189W RPN12P32496 274 aa3.41□□□□□ -1.86
SRP1YNL189W MIA40P36046 403 aa3.41□□□□□ -1.86
SRP1YNL189W SRO77P38163 1010 aa3.41□□□□□ -1.86
SRP1YNL189W ESL1P40456 1118 aa3.41□□□□□ -1.86
SRP1YNL189W SGM1P47166 707 aa3.41□□□□□ -1.86
SRP1YNL189W HOS2P53096 452 aaPredicted RBP3.41□□□□□ -1.86
SRP1YNL189W EFM6P53970 246 aa3.41□□□□□ -1.86
SRP1YNL189W RSM23Q01163 450 aa3.41□□□□□ -1.86
SRP1YNL189W MSC1Q03104 513 aa3.41□□□□□ -1.86
SRP1YNL189W EKI1Q03764 534 aa3.41□□□□□ -1.86
SRP1YNL189W ARP10Q04549 284 aa3.41□□□□□ -1.86
SRP1YNL189W YMR034CQ05131 434 aaPredicted RBP3.41□□□□□ -1.86
SRP1YNL189W ECM30Q06673 1274 aa3.41□□□□□ -1.86
SRP1YNL189W YEH1Q07804 573 aa3.41□□□□□ -1.86
SRP1YNL189W CTI6Q08923 506 aa3.41□□□□□ -1.86
SRP1YNL189W LEU9Q12166 604 aaKnown RBP3.41□□□□□ -1.86
SRP1YNL189W YPT6Q99260 215 aa3.41□□□□□ -1.86
SRP1YNL189W SGS1P35187 1447 aa3.4□□□□□ -1.87
SRP1YNL189W YFL068WP0CX99 160 aa3.4□□□□□ -1.87
SRP1YNL189W YLL066W-AP0CY00 160 aa3.4□□□□□ -1.87
SRP1YNL189W YLL067W-AP0CY01 160 aa3.4□□□□□ -1.87
SRP1YNL189W RPB8P20436 146 aa3.4□□□□□ -1.87
SRP1YNL189W PUP3P25451 205 aaKnown RBP3.4□□□□□ -1.87
SRP1YNL189W STV1P37296 890 aa3.4□□□□□ -1.87
SRP1YNL189W DBP8P38719 431 aa3.4□□□□□ -1.87
SRP1YNL189W YIL152WP40455 235 aa3.4□□□□□ -1.87
SRP1YNL189W MF(ALPHA)1P01149 165 aa3.39□□□□□ -1.87
SRP1YNL189W CBS1P14066 229 aa3.39□□□□□ -1.87
SRP1YNL189W SPE2P21182 396 aa3.39□□□□□ -1.87
SRP1YNL189W SGV1P23293 657 aaKnown RBP3.39□□□□□ -1.87
SRP1YNL189W IMG1P25626 169 aa3.39□□□□□ -1.87
SRP1YNL189W SSE2P32590 693 aaKnown RBP3.39□□□□□ -1.87
SRP1YNL189W PDR3P33200 976 aa3.39□□□□□ -1.87
SRP1YNL189W YBR144CP34215 104 aa3.39□□□□□ -1.87
SRP1YNL189W MTR2P34232 184 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms