RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	RPL19A	P0CX82	189 aa	Known RBP	6.62	□□□□□ -1.35
TIF1	YKR059W	RPL19B	P0CX83	189 aa	Predicted RBP	6.62	□□□□□ -1.35
TIF1	YKR059W	MAS1	P10507	462 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	PMS1	P14242	873 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	VPS1	P21576	704 aa	Known RBP	6.62	□□□□□ -1.35
TIF1	YKR059W	TY2A-C	P25383	438 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	PEX34	P25584	144 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	ERG3	P32353	365 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	MRP20	P32387	263 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	YSC83	P32792	385 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	ORC2	P32833	620 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	TRM2	P33753	639 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	CDS1	P38221	457 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	VID24	P38263	362 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	SIP3	P38717	1229 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	FLC2	P39719	783 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	UBP5	P39944	805 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	THI6	P41835	540 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	VPS75	P53853	264 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	ARP5	P53946	755 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	ARK1	P53974	638 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	SEC5	P89102	971 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	STP1	Q00947	519 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	TY2A-DR2	Q03483	438 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	HMO1	Q03973	246 aa	Known RBP	6.62	□□□□□ -1.35
TIF1	YKR059W	ADY3	Q07732	790 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	TY2A-B	Q12260	438 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	TY2A-OR2	Q12293	438 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	TY2A-DR1	Q12392	438 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	TY2A-OR1	Q12439	438 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	TY2A-DR3	Q99303	438 aa		6.62	□□□□□ -1.35
TIF1	YKR059W	MSB2	P32334	1306 aa		6.61	□□□□□ -1.35
TIF1	YKR059W	GAL80	P04387	435 aa		6.61	□□□□□ -1.35
TIF1	YKR059W	PWP1	P21304	576 aa	Known RBP	6.61	□□□□□ -1.35
TIF1	YKR059W	YCK2	P23292	546 aa	Known RBP	6.61	□□□□□ -1.35
TIF1	YKR059W	ROX1	P25042	368 aa		6.61	□□□□□ -1.35
TIF1	YKR059W	ECM32	P32644	1121 aa	Known RBP	6.61	□□□□□ -1.35
TIF1	YKR059W	MCX1	P38323	520 aa	Predicted RBP	6.61	□□□□□ -1.35
TIF1	YKR059W	MSS4	P38994	779 aa		6.61	□□□□□ -1.35
TIF1	YKR059W	YIL161W	P40449	235 aa	Known RBP	6.61	□□□□□ -1.35
TIF1	YKR059W	IDS2	P46958	469 aa		6.61	□□□□□ -1.35
TIF1	YKR059W	PRY1	P47032	299 aa		6.61	□□□□□ -1.35
TIF1	YKR059W	NOP9	P47077	666 aa	Known RBP	6.61	□□□□□ -1.35
TIF1	YKR059W	CUE3	P53137	624 aa	Known RBP	6.61	□□□□□ -1.35
TIF1	YKR059W	NNF2	P53253	936 aa		6.61	□□□□□ -1.35
TIF1	YKR059W	SPC98	P53540	846 aa		6.61	□□□□□ -1.35
TIF1	YKR059W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	6.61	□□□□□ -1.35	not detected
TIF1	YKR059W	REG1	Q00816	1014 aa		6.61	□□□□□ -1.35
TIF1	YKR059W	VTC3	Q02725	835 aa		6.61	□□□□□ -1.35
TIF1	YKR059W	YML053C	Q04978	212 aa		6.61	□□□□□ -1.35
TIF1	YKR059W	AIM6	Q07716	390 aa		6.61	□□□□□ -1.35
TIF1	YKR059W	RPS14A	P06367	137 aa	Known RBP	6.6	□□□□□ -1.35
TIF1	YKR059W	SUI3	P09064	285 aa	Known RBP	6.6	□□□□□ -1.35
TIF1	YKR059W	FRS2	P15625	503 aa	Known RBP	6.6	□□□□□ -1.35
TIF1	YKR059W	STE14	P32584	239 aa		6.6	□□□□□ -1.35
TIF1	YKR059W	YPT7	P32939	208 aa		6.6	□□□□□ -1.35
TIF1	YKR059W	YHR054C	P38780	354 aa		6.6	□□□□□ -1.35
TIF1	YKR059W	RPP1	P38786	293 aa		6.6	□□□□□ -1.35
TIF1	YKR059W	RPS14B	P39516	138 aa	Known RBP	6.6	□□□□□ -1.35
TIF1	YKR059W	FTR1	P40088	404 aa		6.6	□□□□□ -1.35
TIF1	YKR059W	LSM5	P40089	93 aa	Known RBP	6.6	□□□□□ -1.35
TIF1	YKR059W	ULP2	P40537	1034 aa	Predicted RBP	6.6	□□□□□ -1.35
TIF1	YKR059W	VPS25	P47142	202 aa		6.6	□□□□□ -1.35
TIF1	YKR059W	CSL4	P53859	292 aa	Predicted RBP	6.6	□□□□□ -1.35
TIF1	YKR059W	FDC1	Q03034	503 aa		6.6	□□□□□ -1.35
TIF1	YKR059W	RAD30	Q04049	632 aa		6.6	□□□□□ -1.35
TIF1	YKR059W	ENT4	Q07872	247 aa		6.6	□□□□□ -1.35
TIF1	YKR059W	NMD4	Q12129	218 aa		6.6	□□□□□ -1.35
TIF1	YKR059W	PDH1	Q12428	516 aa	Known RBP	6.6	□□□□□ -1.35
TIF1	YKR059W	ZPS1	Q12512	249 aa		6.6	□□□□□ -1.35
TIF1	YKR059W	NBL1	Q3E7Y6	73 aa		6.6	□□□□□ -1.35
TIF1	YKR059W	RPB2	P08518	1224 aa	Known RBP	6.59	□□□□□ -1.35
TIF1	YKR059W	YCK1	P23291	538 aa		6.59	□□□□□ -1.35
TIF1	YKR059W	VPS3	P23643	1011 aa		6.59	□□□□□ -1.35
TIF1	YKR059W	PEX2	P32800	271 aa		6.59	□□□□□ -1.35
TIF1	YKR059W	KDX1	P36005	433 aa		6.59	□□□□□ -1.35
TIF1	YKR059W	TAT1	P38085	619 aa		6.59	□□□□□ -1.35
TIF1	YKR059W	POL12	P38121	705 aa	Predicted RBP	6.59	□□□□□ -1.35
TIF1	YKR059W	UBP13	P38187	747 aa		6.59	□□□□□ -1.35
TIF1	YKR059W	TDP1	P38319	544 aa		6.59	□□□□□ -1.35
TIF1	YKR059W	MRX6	P48564	524 aa		6.59	□□□□□ -1.35
TIF1	YKR059W	TAM41	P53230	385 aa		6.59	□□□□□ -1.35
TIF1	YKR059W	VAM6	Q07468	1049 aa		6.59	□□□□□ -1.35
TIF1	YKR059W	SGT2	Q12118	346 aa	Known RBP	6.59	□□□□□ -1.35
TIF1	YKR059W	CTF3	Q12748	733 aa		6.59	□□□□□ -1.35
TIF1	YKR059W	TUB3	P09734	445 aa	Known RBP	6.58	□□□□□ -1.36
TIF1	YKR059W	CBS1	P14066	229 aa		6.58	□□□□□ -1.36
TIF1	YKR059W	MTF1	P14908	341 aa	Known RBP	6.58	□□□□□ -1.36
TIF1	YKR059W	REC107	P21651	314 aa		6.58	□□□□□ -1.36
TIF1	YKR059W	DCG1	P32460	244 aa		6.58	□□□□□ -1.36
TIF1	YKR059W	MDL1	P33310	695 aa		6.58	□□□□□ -1.36
TIF1	YKR059W	PIH1	P38768	344 aa		6.58	□□□□□ -1.36
TIF1	YKR059W	YJL193W	P39542	402 aa		6.58	□□□□□ -1.36
TIF1	YKR059W	YIL166C	P40445	542 aa		6.58	□□□□□ -1.36
TIF1	YKR059W	SSU1	P41930	458 aa		6.58	□□□□□ -1.36
TIF1	YKR059W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	6.58	□□□□□ -1.36	not detected
TIF1	YKR059W	LEA1	Q08963	238 aa	Predicted RBP	6.58	□□□□□ -1.36
TIF1	YKR059W	SUL2	Q12325	893 aa		6.58	□□□□□ -1.36
TIF1	YKR059W	IRA1	P18963	3092 aa		6.58	□□□□□ -1.36
TIF1	YKR059W	VPS33	P20795	691 aa		6.57	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms