RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W BAG7Q12128 409 aa3.51□□□□□ -1.85
PRE1YER012W MHP1P43638 1398 aa3.51□□□□□ -1.85
PRE1YER012W SSB1P11484 613 aaKnown RBP3.5□□□□□ -1.85
PRE1YER012W SST2P11972 698 aaKnown RBP3.5□□□□□ -1.85
PRE1YER012W STE50P25344 346 aa3.5□□□□□ -1.85
PRE1YER012W KRE9P39005 276 aa3.5□□□□□ -1.85
PRE1YER012W SSB2P40150 613 aaKnown RBP3.5□□□□□ -1.85
PRE1YER012W CUL3P53202 744 aa3.5□□□□□ -1.85
PRE1YER012W RRP46P53256 223 aaPredicted RBP3.5□□□□□ -1.85
PRE1YER012W EKI1Q03764 534 aa3.5□□□□□ -1.85
PRE1YER012W YDR415CQ04033 374 aaPredicted RBP3.5□□□□□ -1.85
PRE1YER012W MCP2Q06567 569 aa3.5□□□□□ -1.85
PRE1YER012W NYV1Q12255 253 aa3.5□□□□□ -1.85
PRE1YER012W TKL1P23254 680 aaKnown RBP3.49□□□□□ -1.85
PRE1YER012W LRE1P25579 583 aaKnown RBP3.49□□□□□ -1.85
PRE1YER012W TRS65P32893 560 aa3.49□□□□□ -1.85
PRE1YER012W EXO84P38261 753 aa3.49□□□□□ -1.85
PRE1YER012W ATG27P46989 271 aa3.49□□□□□ -1.85
PRE1YER012W CRZ1P53968 678 aa3.49□□□□□ -1.85
PRE1YER012W EIS1Q05050 843 aaKnown RBP3.49□□□□□ -1.85
PRE1YER012W PIF1P07271 859 aa3.48□□□□□ -1.85
PRE1YER012W PDA1P16387 420 aaKnown RBP3.48□□□□□ -1.85
PRE1YER012W SMY1P32364 656 aaKnown RBP3.48□□□□□ -1.85
PRE1YER012W SDS24P38314 527 aa3.48□□□□□ -1.85
PRE1YER012W PHM8P40025 321 aa3.48□□□□□ -1.85
PRE1YER012W DSD1P53095 428 aa3.48□□□□□ -1.85
PRE1YER012W YTP1P53584 459 aa3.48□□□□□ -1.85
PRE1YER012W TAP42Q04372 366 aa3.48□□□□□ -1.85
PRE1YER012W BRE1Q07457 700 aaKnown RBP3.48□□□□□ -1.85
PRE1YER012W BUG1Q12191 341 aa3.48□□□□□ -1.85
PRE1YER012W FIG2P25653 1609 aa3.48□□□□□ -1.85
PRE1YER012W YML002WP0CF17 737 aa3.47□□□□□ -1.85
PRE1YER012W SRP54P20424 541 aaKnown RBP3.47□□□□□ -1.85
PRE1YER012W YPK3P38070 525 aa3.47□□□□□ -1.85
PRE1YER012W YBR139WP38109 508 aa3.47□□□□□ -1.85
PRE1YER012W RFC1P38630 861 aaKnown RBP3.47□□□□□ -1.85
PRE1YER012W BUD27P43573 796 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
PRE1YER012W IMA1P53051 589 aa3.47□□□□□ -1.85
PRE1YER012W CPR6P53691 371 aaKnown RBP3.47□□□□□ -1.85
PRE1YER012W ALE1Q08548 619 aa3.47□□□□□ -1.85
PRE1YER012W SWT1Q12104 458 aa3.47□□□□□ -1.85
PRE1YER012W CSR2Q12734 1121 aa3.47□□□□□ -1.85
PRE1YER012W HKR1P41809 1802 aa3.47□□□□□ -1.85
PRE1YER012W MIS1P09440 975 aaKnown RBP3.46□□□□□ -1.86
PRE1YER012W GUK1P15454 187 aaKnown RBP3.46□□□□□ -1.86
PRE1YER012W HSP104P31539 908 aaKnown RBP3.46□□□□□ -1.86
PRE1YER012W TOM20P35180 183 aa3.46□□□□□ -1.86
PRE1YER012W GEX2P36173 615 aa3.46□□□□□ -1.86
PRE1YER012W YJL070CP40361 888 aa3.46□□□□□ -1.86
PRE1YER012W HIS6P40545 261 aa3.46□□□□□ -1.86
PRE1YER012W AZF1P41696 914 aa3.46□□□□□ -1.86
PRE1YER012W PEX8P53248 589 aa3.46□□□□□ -1.86
PRE1YER012W PDS5Q04264 1277 aa3.46□□□□□ -1.86
PRE1YER012W CRN1Q06440 651 aa3.46□□□□□ -1.86
PRE1YER012W ATG23Q06671 453 aa3.46□□□□□ -1.86
PRE1YER012W DAP1Q12091 152 aa3.46□□□□□ -1.86
PRE1YER012W SPT7P35177 1332 aa3.45□□□□□ -1.86
PRE1YER012W MSS18P08593 268 aa3.45□□□□□ -1.86
PRE1YER012W ICL1P28240 557 aaPredicted RBP3.45□□□□□ -1.86
PRE1YER012W STV1P37296 890 aa3.45□□□□□ -1.86
PRE1YER012W RIM2P38127 377 aa3.45□□□□□ -1.86
PRE1YER012W RTS2P40962 232 aa3.45□□□□□ -1.86
PRE1YER012W FET5P43561 622 aa3.45□□□□□ -1.86
PRE1YER012W DCP2P53550 970 aaKnown RBP3.45□□□□□ -1.86
PRE1YER012W ZDS2P54786 942 aa3.45□□□□□ -1.86
PRE1YER012W ARP10Q04549 284 aa3.45□□□□□ -1.86
PRE1YER012W GAL1P04385 528 aa3.44□□□□□ -1.86
PRE1YER012W TOP1P04786 769 aa3.44□□□□□ -1.86
PRE1YER012W BIK1P11709 440 aa3.44□□□□□ -1.86
PRE1YER012W PMS1P14242 873 aa3.44□□□□□ -1.86
PRE1YER012W GLN3P18494 730 aa3.44□□□□□ -1.86
PRE1YER012W CLB4P24871 460 aa3.44□□□□□ -1.86
PRE1YER012W RPN2P32565 945 aaKnown RBP3.44□□□□□ -1.86
PRE1YER012W FSH1P38777 243 aaKnown RBP3.44□□□□□ -1.86
PRE1YER012W PUG1P40100 303 aa3.44□□□□□ -1.86
PRE1YER012W SWP82P43554 623 aa3.44□□□□□ -1.86
PRE1YER012W YJR008WP47085 338 aa3.44□□□□□ -1.86
PRE1YER012W YGL082WP53155 381 aa3.44□□□□□ -1.86
PRE1YER012W MET14Q02196 202 aa3.44□□□□□ -1.86
PRE1YER012W YDL218WQ07629 317 aa3.44□□□□□ -1.86
PRE1YER012W YLR278CQ05854 1341 aa3.44□□□□□ -1.86
PRE1YER012W ATP2P00830 511 aaKnown RBP3.43□□□□□ -1.86
PRE1YER012W RAP1P11938 827 aa3.43□□□□□ -1.86
PRE1YER012W MSH1P25846 959 aa3.43□□□□□ -1.86
PRE1YER012W LHS1P36016 881 aa3.43□□□□□ -1.86
PRE1YER012W SEC31P38968 1273 aaKnown RBP3.43□□□□□ -1.86
PRE1YER012W YFR020WP43600 232 aa3.43□□□□□ -1.86
PRE1YER012W IMP4P53941 290 aaKnown RBP3.43□□□□□ -1.86
PRE1YER012W CTL1Q03220 320 aaKnown RBP3.43□□□□□ -1.86
PRE1YER012W TRS130Q03660 1102 aa3.43□□□□□ -1.86
PRE1YER012W VAM6Q07468 1049 aa3.43□□□□□ -1.86
PRE1YER012W TMA7Q3E764 64 aaKnown RBP3.43□□□□□ -1.86
PRE1YER012W PRP16P15938 1071 aaPredicted RBP3.42□□□□□ -1.86
PRE1YER012W SAN1P22470 610 aa3.42□□□□□ -1.86
PRE1YER012W NTR2P36118 322 aaPredicted RBP3.42□□□□□ -1.86
PRE1YER012W YIL161WP40449 235 aaKnown RBP3.42□□□□□ -1.86
PRE1YER012W CTK2P46962 323 aa3.42□□□□□ -1.86
PRE1YER012W YOL159CQ08300 171 aa3.42□□□□□ -1.86
PRE1YER012W PCD1Q12524 340 aa3.42□□□□□ -1.86
PRE1YER012W RPB8P20436 146 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 91.9 ms