RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C COG4Q06096 861 aa3.38□□□□□ -1.87
VAB2YEL005C GSH2Q08220 491 aa3.38□□□□□ -1.87
VAB2YEL005C CIR2Q08822 631 aa3.38□□□□□ -1.87
VAB2YEL005C RRI2Q12348 645 aa3.38□□□□□ -1.87
VAB2YEL005C INH1P01097 85 aa3.37□□□□□ -1.87
VAB2YEL005C ARG81P05085 880 aa3.37□□□□□ -1.87
VAB2YEL005C CHO1P08456 276 aa3.37□□□□□ -1.87
VAB2YEL005C IMP2'P32351 346 aa3.37□□□□□ -1.87
VAB2YEL005C ECM32P32644 1121 aaKnown RBP3.37□□□□□ -1.87
VAB2YEL005C MIA40P36046 403 aa3.37□□□□□ -1.87
VAB2YEL005C ICS2P38284 255 aa3.37□□□□□ -1.87
VAB2YEL005C FLC2P39719 783 aa3.37□□□□□ -1.87
VAB2YEL005C IRC8P47046 822 aa3.37□□□□□ -1.87
VAB2YEL005C VID30P53076 958 aa3.37□□□□□ -1.87
VAB2YEL005C BOP3P53958 396 aa3.37□□□□□ -1.87
VAB2YEL005C TSR2Q06672 205 aaKnown RBP3.37□□□□□ -1.87
VAB2YEL005C ECM30Q06673 1274 aa3.37□□□□□ -1.87
VAB2YEL005C FMP40Q08968 688 aaPredicted RBP3.37□□□□□ -1.87
VAB2YEL005C ATG9Q12142 997 aa3.37□□□□□ -1.87
VAB2YEL005C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
VAB2YEL005C MF(ALPHA)1P01149 165 aa3.36□□□□□ -1.87
VAB2YEL005C GCN4P03069 281 aa3.36□□□□□ -1.87
VAB2YEL005C CBP1P07252 654 aa3.36□□□□□ -1.87
VAB2YEL005C ARD1P07347 238 aaPredicted RBP3.36□□□□□ -1.87
VAB2YEL005C CLB2P24869 491 aa3.36□□□□□ -1.87
VAB2YEL005C SGF29P25554 259 aa3.36□□□□□ -1.87
VAB2YEL005C ASK1P35734 292 aa3.36□□□□□ -1.87
VAB2YEL005C VPS41P38959 992 aa3.36□□□□□ -1.87
VAB2YEL005C ELO1P39540 310 aa3.36□□□□□ -1.87
VAB2YEL005C UPF3P48412 387 aaKnown RBP3.36□□□□□ -1.87
VAB2YEL005C LCL3P53153 274 aa3.36□□□□□ -1.87
VAB2YEL005C YNL181WP53878 407 aa3.36□□□□□ -1.87
VAB2YEL005C ASI1P54074 624 aa3.36□□□□□ -1.87
VAB2YEL005C IZH1Q03419 316 aa3.36□□□□□ -1.87
VAB2YEL005C CAC2Q04199 468 aa3.36□□□□□ -1.87
VAB2YEL005C YDL218WQ07629 317 aa3.36□□□□□ -1.87
VAB2YEL005C DSE3Q08729 430 aa3.36□□□□□ -1.87
VAB2YEL005C RDR1Q08904 546 aa3.36□□□□□ -1.87
VAB2YEL005C CTI6Q08923 506 aa3.36□□□□□ -1.87
VAB2YEL005C UBX3Q12229 455 aa3.36□□□□□ -1.87
VAB2YEL005C EDE1P34216 1381 aa3.36□□□□□ -1.87
VAB2YEL005C MRP7P12687 371 aa3.35□□□□□ -1.87
VAB2YEL005C HSC82P15108 705 aaKnown RBP3.35□□□□□ -1.87
VAB2YEL005C SUI2P20459 304 aaKnown RBP3.35□□□□□ -1.87
VAB2YEL005C AIM17P23180 465 aaKnown RBP3.35□□□□□ -1.87
VAB2YEL005C IMG1P25626 169 aa3.35□□□□□ -1.87
VAB2YEL005C CMK1P27466 446 aaKnown RBP3.35□□□□□ -1.87
VAB2YEL005C MEP2P41948 499 aa3.35□□□□□ -1.87
VAB2YEL005C SGM1P47166 707 aa3.35□□□□□ -1.87
VAB2YEL005C DSD1P53095 428 aa3.35□□□□□ -1.87
VAB2YEL005C YGR066CP53242 292 aa3.35□□□□□ -1.87
VAB2YEL005C EAF7P53911 425 aaKnown RBP3.35□□□□□ -1.87
VAB2YEL005C RPL15BP54780 204 aaPredicted RBP3.35□□□□□ -1.87
VAB2YEL005C MAK10Q02197 733 aa3.35□□□□□ -1.87
VAB2YEL005C YDR415CQ04033 374 aaPredicted RBP3.35□□□□□ -1.87
VAB2YEL005C ATG26Q06321 1198 aa3.35□□□□□ -1.87
VAB2YEL005C LUC7Q07508 261 aaPredicted RBP3.35□□□□□ -1.87
VAB2YEL005C TEN1Q07921 160 aa3.35□□□□□ -1.87
VAB2YEL005C ETT1Q08421 412 aaKnown RBP3.35□□□□□ -1.87
VAB2YEL005C NMD4Q12129 218 aa3.35□□□□□ -1.87
VAB2YEL005C YLR112WQ12130 139 aa3.35□□□□□ -1.87
VAB2YEL005C CBS1P14066 229 aa3.34□□□□□ -1.87
VAB2YEL005C EST1P17214 699 aaPredicted RBP3.34□□□□□ -1.87
VAB2YEL005C OCA4P25366 362 aa3.34□□□□□ -1.87
VAB2YEL005C BOS1P25385 244 aa3.34□□□□□ -1.87
VAB2YEL005C SEF1P34228 1148 aa3.34□□□□□ -1.87
VAB2YEL005C YKL100CP34248 587 aa3.34□□□□□ -1.87
VAB2YEL005C UBP11P36026 717 aa3.34□□□□□ -1.87
VAB2YEL005C JNM1P36224 373 aa3.34□□□□□ -1.87
VAB2YEL005C MNN2P38069 597 aa3.34□□□□□ -1.87
VAB2YEL005C TSC10P38342 320 aa3.34□□□□□ -1.87
VAB2YEL005C RRP3P38712 501 aaKnown RBP3.34□□□□□ -1.87
VAB2YEL005C ANS1P38832 159 aa3.34□□□□□ -1.87
VAB2YEL005C ALG5P40350 334 aa3.34□□□□□ -1.87
VAB2YEL005C ARF3P40994 183 aaRIP-Chip data3.34□□□□□ -1.87 RIP-Chip
VAB2YEL005C LYS4P49367 693 aaPredicted RBP3.34□□□□□ -1.87
VAB2YEL005C ERG26P53199 349 aaKnown RBP3.34□□□□□ -1.87
VAB2YEL005C RBG2P53295 368 aaKnown RBP3.34□□□□□ -1.87
VAB2YEL005C DUG3P53871 357 aa3.34□□□□□ -1.87
VAB2YEL005C GRC3Q07845 632 aa3.34□□□□□ -1.87
VAB2YEL005C CDC45Q08032 650 aa3.34□□□□□ -1.87
VAB2YEL005C MED1Q12321 566 aa3.34□□□□□ -1.87
VAB2YEL005C RPL42AP0CX27 106 aaKnown RBP3.33□□□□□ -1.88
VAB2YEL005C RPL42BP0CX28 106 aaKnown RBP3.33□□□□□ -1.88
VAB2YEL005C YER190C-BP0CX94 160 aa3.33□□□□□ -1.88
VAB2YEL005C YEL077W-AP0CX95 160 aa3.33□□□□□ -1.88
VAB2YEL005C YGR296C-BP0CX96 160 aa3.33□□□□□ -1.88
VAB2YEL005C YPL283W-BP0CX97 160 aa3.33□□□□□ -1.88
VAB2YEL005C YPR204C-AP0CX98 160 aa3.33□□□□□ -1.88
VAB2YEL005C GAC1P28006 793 aa3.33□□□□□ -1.88
VAB2YEL005C ROT2P38138 954 aa3.33□□□□□ -1.88
VAB2YEL005C IAH1P41734 238 aa3.33□□□□□ -1.88
VAB2YEL005C MRX6P48564 524 aa3.33□□□□□ -1.88
VAB2YEL005C LYS20P48570 428 aaKnown RBP3.33□□□□□ -1.88
VAB2YEL005C YGL082WP53155 381 aa3.33□□□□□ -1.88
VAB2YEL005C EFM6P53970 246 aa3.33□□□□□ -1.88
VAB2YEL005C YVH1Q02256 364 aaKnown RBP3.33□□□□□ -1.88
VAB2YEL005C NGL3Q03210 505 aa3.33□□□□□ -1.88
VAB2YEL005C YMR160WQ03823 816 aa3.33□□□□□ -1.88
VAB2YEL005C YKU80Q04437 629 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms