RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	MUM2	P38236	366 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	DED81	P38707	554 aa	Known RBP	5.74	□□□□□ -1.49
ATG12	YBR217W	SSN3	P39073	555 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	MNN1	P39106	762 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	ERV46	P39727	415 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	YEL073C	P39974	107 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	HAT2	P39984	401 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	HOS4	P40480	1083 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	ZIM17	P42844	174 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	YJR039W	P47107	1121 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	URB2	P47108	1174 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	NNF1	P47149	201 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	BUD32	P53323	261 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	USA1	Q03714	838 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	TRM12	Q04235	462 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	SSL1	Q04673	461 aa	Predicted RBP	5.74	□□□□□ -1.49
ATG12	YBR217W	SEC53	P07283	254 aa	Known RBP	5.73	□□□□□ -1.49
ATG12	YBR217W	FUM1	P08417	488 aa	Known RBP	5.73	□□□□□ -1.49
ATG12	YBR217W	SSC1	P0CS90	654 aa	Known RBP	5.73	□□□□□ -1.49
ATG12	YBR217W	SCL1	P21243	252 aa	Known RBP	5.73	□□□□□ -1.49
ATG12	YBR217W	HRR25	P29295	494 aa	Known RBP	5.73	□□□□□ -1.49
ATG12	YBR217W	MF(ALPHA)2	P32435	120 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	RIM1	P32445	135 aa	Known RBP	5.73	□□□□□ -1.49
ATG12	YBR217W	ATP11	P32453	318 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	BEM3	P32873	1128 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	YHR020W	P38708	688 aa	Known RBP	5.73	□□□□□ -1.49
ATG12	YBR217W	OCA5	P38738	679 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	SPC97	P38863	823 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	FAA3	P39002	694 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	SAP1	P39955	897 aa	Known RBP	5.73	□□□□□ -1.49
ATG12	YBR217W	YJL107C	P42947	387 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	GAT1	P43574	510 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	NUP85	P46673	744 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	HST3	P53687	447 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	SLT2	Q00772	484 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	SPP2	Q02521	185 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	RNY1	Q02933	434 aa	Known RBP	5.73	□□□□□ -1.49
ATG12	YBR217W	PFA4	Q12006	378 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	UBX3	Q12229	455 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	YOR012W	Q12351	137 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	ICT1	Q12385	394 aa		5.73	□□□□□ -1.49
ATG12	YBR217W	ILV2	P07342	687 aa	Known RBP	5.72	□□□□□ -1.49
ATG12	YBR217W	MSH1	P25846	959 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	TIP20	P33891	701 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	RPF2	P36160	344 aa	Known RBP	5.72	□□□□□ -1.49
ATG12	YBR217W	EFM1	P38732	585 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
ATG12	YBR217W	CEM1	P39525	442 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	SSP120	P39931	234 aa	Known RBP	5.72	□□□□□ -1.49
ATG12	YBR217W	PEP8	P40335	379 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	UTP18	P40362	594 aa	Predicted RBP	5.72	□□□□□ -1.49
ATG12	YBR217W	TFG1	P41895	735 aa	Predicted RBP	5.72	□□□□□ -1.49
ATG12	YBR217W	DUG1	P43616	481 aa	Known RBP	5.72	□□□□□ -1.49
ATG12	YBR217W	PET130	P47065	347 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	HXT16	P47185	567 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	BOL2	P53082	120 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	BIO4	P53630	237 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	ZRG17	P53735	605 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	HXT15	P54854	567 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	ADE12	P80210	433 aa	Known RBP	5.72	□□□□□ -1.49
ATG12	YBR217W	YAT1	P80235	687 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	YMR209C	Q03648	457 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	CSN9	Q03981	162 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	YLR177W	Q06251	628 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	ALR1	Q08269	859 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	SLP1	Q12232	587 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	GPR1	Q12361	961 aa		5.72	□□□□□ -1.49
ATG12	YBR217W	CDC21	P06785	304 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	SWI5	P08153	709 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	YAR066W	P0CX18	203 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	YHR214W	P0CX19	203 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	TRX2	P22803	104 aa	Known RBP	5.71	□□□□□ -1.5
ATG12	YBR217W	ILV6	P25605	309 aa	Known RBP	5.71	□□□□□ -1.5
ATG12	YBR217W	AAD3	P25612	363 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	PTM1	P32857	523 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	DEF1	P35732	738 aa	Known RBP	5.71	□□□□□ -1.5
ATG12	YBR217W	RRP14	P36080	434 aa	Known RBP	5.71	□□□□□ -1.5
ATG12	YBR217W	PIM1	P36775	1133 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	YHR182W	P38870	785 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	YJL206C	P39529	758 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	YAL037W	P39728	267 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	GIM4	P40005	111 aa	Known RBP	5.71	□□□□□ -1.5
ATG12	YBR217W	MGS1	P40151	587 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	SSU1	P41930	458 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	PFA3	P42836	336 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	FET5	P43561	622 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	TIS11	P47977	285 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	AAT1	Q01802	451 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	GOT1	Q03554	138 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	ROT1	Q03691	256 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	TAF12	Q03761	539 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	BNA5	Q05979	453 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	YLR456W	Q06199	204 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	EAF1	Q06337	982 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	IOC2	Q12072	812 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	CHS5	Q12114	671 aa	Known RBP	5.71	□□□□□ -1.5
ATG12	YBR217W	PST1	Q12355	444 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	KCS1	Q12494	1050 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	RGS2	Q99188	309 aa		5.71	□□□□□ -1.5
ATG12	YBR217W	RNQ1	P25367	405 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms