RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	CSL4	P53859	292 aa	Predicted RBP	5.16	□□□□□ -1.58
ECM1	YAL059W	EGD1	Q02642	157 aa	Known RBP	5.16	□□□□□ -1.58
ECM1	YAL059W	ARX1	Q03862	593 aa	Known RBP	5.16	□□□□□ -1.58
ECM1	YAL059W	YFT2	Q06676	274 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	TCO89	Q08921	799 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	YIL002W-A	Q3E7Z5	69 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	YOR019W	Q99248	730 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	ATP2	P00830	511 aa	Known RBP	5.15	□□□□□ -1.59
ECM1	YAL059W	RPL6B	P05739	176 aa	Known RBP	5.15	□□□□□ -1.59
ECM1	YAL059W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
ECM1	YAL059W	RPL1A	P0CX43	217 aa	Known RBP	5.15	□□□□□ -1.59
ECM1	YAL059W	RPL1B	P0CX44	217 aa	Known RBP	5.15	□□□□□ -1.59
ECM1	YAL059W	CDC43	P18898	376 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	GCD7	P32502	381 aa	Predicted RBP	5.15	□□□□□ -1.59
ECM1	YAL059W	PEX18	P38855	283 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	BDH2	P39713	417 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	JHD1	P40034	492 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	PKP1	P40530	394 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	GSM1	P42950	618 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	CAK1	P43568	368 aa	Predicted RBP	5.15	□□□□□ -1.59
ECM1	YAL059W	ALK1	P43633	760 aa	Known RBP	5.15	□□□□□ -1.59
ECM1	YAL059W	TAH11	P47112	604 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	LIA1	P47120	325 aa	Known RBP	5.15	□□□□□ -1.59
ECM1	YAL059W	AAD10	P47182	288 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	YGR066C	P53242	292 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	YGR111W	P53265	400 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	RPL6A	Q02326	176 aa	Known RBP	5.15	□□□□□ -1.59
ECM1	YAL059W	VPS64	Q03944	604 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	MRD1	Q06106	887 aa	Known RBP	5.15	□□□□□ -1.59
ECM1	YAL059W	KAP95	Q06142	861 aa	Known RBP	5.15	□□□□□ -1.59
ECM1	YAL059W	RRT8	Q08219	342 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	DCI1	Q08558	271 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	ICL2	Q12031	575 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
ECM1	YAL059W	TAF3	Q12297	353 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	ERG27	Q12452	347 aa	Known RBP	5.15	□□□□□ -1.59
ECM1	YAL059W	ISN1	Q99312	450 aa		5.15	□□□□□ -1.59
ECM1	YAL059W	PET122	P10355	254 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	DAP2	P18962	818 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	LTV1	P34078	463 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	SEF1	P34228	1148 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	RPC37	P36121	282 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	MAL33	P38157	468 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	CDS1	P38221	457 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	CST26	P38226	397 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	TDP1	P38319	544 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	ALD5	P40047	520 aa	Known RBP	5.14	□□□□□ -1.59
ECM1	YAL059W	VFA1	P40080	203 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	CTR1	P49573	406 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	LCL3	P53153	274 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	YGR151C	P53287	111 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	YDR239C	Q03780	787 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	INP2	Q03824	705 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	PPN1	Q04119	674 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	MRPL1	Q04599	285 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	MDM36	Q06820	579 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	VAM6	Q07468	1049 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	SUL2	Q12325	893 aa		5.14	□□□□□ -1.59
ECM1	YAL059W	RPS7A	P26786	190 aa	Known RBP	5.13	□□□□□ -1.59
ECM1	YAL059W	DPH5	P32469	300 aa	Predicted RBP	5.13	□□□□□ -1.59
ECM1	YAL059W	MSS1	P32559	526 aa	Predicted RBP	5.13	□□□□□ -1.59
ECM1	YAL059W	KES1	P35844	434 aa	Known RBP	5.13	□□□□□ -1.59
ECM1	YAL059W	YKT6	P36015	200 aa	Known RBP	5.13	□□□□□ -1.59
ECM1	YAL059W	GLG1	P36143	616 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	PIM1	P36775	1133 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	CTP1	P38152	299 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	GDT1	P38301	280 aa	Predicted RBP	5.13	□□□□□ -1.59
ECM1	YAL059W	ERC1	P38767	581 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	AIM10	P39965	576 aa	Known RBP	5.13	□□□□□ -1.59
ECM1	YAL059W	CHS6	P40955	746 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	VPS73	P53142	486 aa	Known RBP	5.13	□□□□□ -1.59
ECM1	YAL059W	DCP2	P53550	970 aa	Known RBP	5.13	□□□□□ -1.59
ECM1	YAL059W	GIM3	P53900	129 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	YPL108W	Q02872	168 aa	Predicted RBP	5.13	□□□□□ -1.59
ECM1	YAL059W	NGL2	Q03264	515 aa	Known RBP	5.13	□□□□□ -1.59
ECM1	YAL059W	ABZ2	Q03266	374 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	PPM1	Q04081	328 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	ECM18	Q04623	453 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	YDL086W	Q07505	273 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	YEH1	Q07804	573 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	TMA16	Q08687	178 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	ATG29	Q12092	213 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	TAD3	Q9URQ3	322 aa		5.13	□□□□□ -1.59
ECM1	YAL059W	HMG2	P12684	1045 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	ABF1	P14164	731 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	FUB1	P25659	250 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	SYN8	P31377	255 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	HMX1	P32339	317 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	SPC110	P32380	944 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	YBL028C	P38202	106 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	RRT2	P38332	387 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	YMR124W	P39523	943 aa	Known RBP	5.12	□□□□□ -1.59
ECM1	YAL059W	SLZ1	P40167	298 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	ASE1	P50275	885 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	INN1	P53901	409 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	AQR1	P53943	586 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	KAP120	Q02932	1032 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	TRS31	Q03337	283 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	VPS54	Q12071	889 aa		5.12	□□□□□ -1.59
ECM1	YAL059W	SWT1	Q12104	458 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms