RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 TINF2Q9BSI4 451 aa11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 MOV10L1Q9BXT6 1211 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 HERC5Q9UII4 1024 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 FAM184BQ9ULE4 1060 aa11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 CNPY2Q9Y2B0 182 aa11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 EP300Q09472 2414 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-205ENST00000350435 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
UBE2D3-205ENST00000350435 ERCC3P19447 782 aa11.25□□□□□ -0.61
UBE2D3-205ENST00000350435 CLUL1Q15846 466 aa11.25□□□□□ -0.61
UBE2D3-205ENST00000350435 KIAA0319Q5VV43 1072 aa11.25□□□□□ -0.61
UBE2D3-205ENST00000350435 CCDC30Q5VVM6 783 aa11.25□□□□□ -0.61
UBE2D3-205ENST00000350435 BANK1Q8NDB2 785 aa11.25□□□□□ -0.61
UBE2D3-205ENST00000350435 AGBL1Q96MI9 1066 aa11.25□□□□□ -0.61
UBE2D3-205ENST00000350435 PUS3Q9BZE2 481 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-205ENST00000350435 CEP250Q9BV73 2442 aa11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 SOBPA7XYQ1 873 aa11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 DUSP11O75319 330 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 KCNJ6P48051 423 aa11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 ZYXQ15942 572 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 RSPO4Q2I0M5 234 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 GNASQ5JWF2 1037 aa11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 FBXO22Q8NEZ5 403 aa11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 FEZ1Q99689 392 aa11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 HINFPQ9BQA5 517 aa11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 MROH8Q9H579 483 aa11.24□□□□□ -0.61
UBE2D3-205ENST00000350435 NCK2O43639 380 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 LMNAP02545 664 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 FCER1AP12319 257 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 BTDP43251 543 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 DMWDQ09019 674 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 SMAD4Q13485 552 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 COL19A1Q14993 1142 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 NEUROD2Q15784 382 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 TCEAL5Q5H9L2 206 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 METTL24Q5JXM2 366 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 RPAINQ86UA6 219 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 NCAPG2Q86XI2 1143 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 SLF2Q8IX21 1173 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 C12orf42Q96LP6 360 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 RIPOR3Q96MK2 946 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 CRBNQ96SW2 442 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 FTOQ9C0B1 505 aaKnown RBP eCLIP11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 SPATC1LQ9H0A9 340 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 TRPV6Q9H1D0 765 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 GINM1Q9NU53 330 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 SPTBN2O15020 2390 aa11.23□□□□□ -0.61
UBE2D3-205ENST00000350435 B4GALT4O60513 344 aa11.22□□□□□ -0.61
UBE2D3-205ENST00000350435 BAIAP3O94812 1187 aa11.22□□□□□ -0.61
UBE2D3-205ENST00000350435 PDGFBP01127 241 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-205ENST00000350435 IFIT1P09914 478 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-205ENST00000350435 SDHBP21912 280 aa11.22□□□□□ -0.61
UBE2D3-205ENST00000350435 RFC2P35250 354 aa11.22□□□□□ -0.61
UBE2D3-205ENST00000350435 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-205ENST00000350435 SLC43A3Q8NBI5 491 aa11.22□□□□□ -0.61
UBE2D3-205ENST00000350435 KIF16BQ96L93 1317 aa11.22□□□□□ -0.61
UBE2D3-205ENST00000350435 SEZ6LQ9BYH1 1024 aa11.22□□□□□ -0.61
UBE2D3-205ENST00000350435 NSUN3Q9H649 340 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-205ENST00000350435 ASPMQ8IZT6 3477 aa11.22□□□□□ -0.61
UBE2D3-205ENST00000350435 TANC1Q9C0D5 1861 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 TNKSO95271 1327 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 LINC01553A4QN01 128 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 PDE8BO95263 885 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 GDF11O95390 407 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 LTBRP36941 435 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 USP14P54578 494 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 JAG1P78504 1218 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 ITGA7Q13683 1181 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 PLS1Q14651 629 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 DZIP1Q86YF9 867 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 LINS1Q8NG48 757 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 SIL1Q9H173 461 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 SEMA4AQ9H3S1 761 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 MBIPQ9NS73 344 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 ZBTB21Q9ULJ3 1066 aa11.21□□□□□ -0.61
UBE2D3-205ENST00000350435 RALGAPA2Q2PPJ7 1873 aa11.21□□□□□ -0.62
UBE2D3-205ENST00000350435 SIPA1L1O43166 1804 aa11.21□□□□□ -0.62
UBE2D3-205ENST00000350435 UNC79Q9P2D8 2635 aa11.2□□□□□ -0.62
UBE2D3-205ENST00000350435 LOC730098B7Z3J9 87 aa11.2□□□□□ -0.62
UBE2D3-205ENST00000350435 ADRB1P08588 477 aa11.2□□□□□ -0.62
UBE2D3-205ENST00000350435 VCAM1P19320 739 aa11.2□□□□□ -0.62
UBE2D3-205ENST00000350435 GJA9P57773 515 aa11.2□□□□□ -0.62
UBE2D3-205ENST00000350435 TMEM105Q8N8V8 129 aa11.2□□□□□ -0.62
UBE2D3-205ENST00000350435 RAD9AQ99638 391 aa11.2□□□□□ -0.62
UBE2D3-205ENST00000350435 TRIM34Q9BYJ4 488 aa11.2□□□□□ -0.62
UBE2D3-205ENST00000350435 ZHX1Q9UKY1 873 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-205ENST00000350435 DIS3Q9Y2L1 958 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-205ENST00000350435 TET1Q8NFU7 2136 aa11.2□□□□□ -0.62
UBE2D3-205ENST00000350435 GCN1Q92616 2671 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-205ENST00000350435 SALL1Q9NSC2 1324 aa11.19□□□□□ -0.62
UBE2D3-205ENST00000350435 CABYRO75952 493 aa11.19□□□□□ -0.62
UBE2D3-205ENST00000350435 PGK2P07205 417 aa11.19□□□□□ -0.62
UBE2D3-205ENST00000350435 COL9A3Q14050 684 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-205ENST00000350435 TMCO2Q7Z6W1 182 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-205ENST00000350435 ZGPATQ8N5A5 531 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-205ENST00000350435 MMP19Q99542 508 aa11.19□□□□□ -0.62
UBE2D3-205ENST00000350435 STK31Q9BXU1 1019 aa11.19□□□□□ -0.62
UBE2D3-205ENST00000350435 UPF3AQ9H1J1 476 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms