RNA–Protein interactions for RNA: YNL054W-B

YNL054W-B, Transcript of TyB Gag-Pol protein, yeastyeast

Gene YNL054W-B, Length 5,250 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-BYNL054W-B FRS1P15624 595 aaKnown RBP0.44□□□□□ -2.34
YNL054W-BYNL054W-B CDC15P27636 974 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B DOT5P40553 215 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B PIP2P52960 996 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B HEF3P53978 1044 aaKnown RBP0.44□□□□□ -2.34
YNL054W-BYNL054W-B HMO1Q03973 246 aaKnown RBP0.44□□□□□ -2.34
YNL054W-BYNL054W-B CWC2Q12046 339 aaPredicted RBP0.44□□□□□ -2.34
YNL054W-BYNL054W-B SSK22P25390 1331 aaPredicted RBP0.44□□□□□ -2.34
YNL054W-BYNL054W-B SAC3P46674 1301 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B FLO11P08640 1367 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B ACO1P19414 778 aaKnown RBP RIP-Chip data0.44□□□□□ -2.34not detected
YNL054W-BYNL054W-B CYS4P32582 507 aaKnown RBP0.44□□□□□ -2.34
YNL054W-BYNL054W-B YME1P32795 747 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B UBP12P39538 1254 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B ARR3Q06598 404 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B HOP1P20050 605 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B SPE2P21182 396 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B YKR018CP36114 725 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B SAP1P39955 897 aaKnown RBP0.44□□□□□ -2.34
YNL054W-BYNL054W-B YIR035CP40579 254 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B SAP4P53036 818 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B LCL3P53153 274 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B IZH1Q03419 316 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B HRD3Q05787 833 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B LCB4Q12246 624 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B CDC23P16522 626 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B RRP14P36080 434 aaKnown RBP0.44□□□□□ -2.34
YNL054W-BYNL054W-B ATG12P38316 186 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B PCM1P38628 557 aaKnown RBP0.44□□□□□ -2.34
YNL054W-BYNL054W-B RGI2P40188 164 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B TAP42Q04372 366 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B THI73Q07904 523 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B YLR111WQ12528 110 aa0.44□□□□□ -2.34
YNL054W-BYNL054W-B OLE1P21147 510 aaKnown RBP0.43□□□□□ -2.34
YNL054W-BYNL054W-B HBS1P32769 611 aaKnown RBP0.43□□□□□ -2.34
YNL054W-BYNL054W-B RTS1P38903 757 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B ELP2P42935 788 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B ALG12P53730 551 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B FOL1P53848 824 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B TRE2Q08693 809 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B FMP27Q06179 2628 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B RNR4P49723 345 aaKnown RBP0.43□□□□□ -2.34
YNL054W-BYNL054W-B PTA1Q01329 785 aaPredicted RBP0.43□□□□□ -2.34
YNL054W-BYNL054W-B ERP1Q05359 219 aaKnown RBP0.43□□□□□ -2.34
YNL054W-BYNL054W-B CHO2P05374 869 aaKnown RBP0.43□□□□□ -2.34
YNL054W-BYNL054W-B SWI4P25302 1093 aaKnown RBP0.43□□□□□ -2.34
YNL054W-BYNL054W-B NPR2P39923 615 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B GSM1P42950 618 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B YGR054WP53235 642 aaKnown RBP0.43□□□□□ -2.34
YNL054W-BYNL054W-B ATG33Q06485 197 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B YPS3Q12303 508 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B PRM7Q12459 698 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B SPO7P18410 259 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B SAC6P32599 642 aaKnown RBP0.43□□□□□ -2.34
YNL054W-BYNL054W-B ALG8P40351 577 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B BST1P43571 1029 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B POL31P46957 487 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B RPL15BP54780 204 aaPredicted RBP0.43□□□□□ -2.34
YNL054W-BYNL054W-B UBP16Q02863 499 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B CRF1Q04930 467 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B INP53Q12271 1107 aa0.43□□□□□ -2.34
YNL054W-BYNL054W-B RPS21AP0C0V8 87 aaKnown RBP0.42□□□□□ -2.34
YNL054W-BYNL054W-B KRS1P15180 591 aaKnown RBP0.42□□□□□ -2.34
YNL054W-BYNL054W-B PFK2P16862 959 aaKnown RBP RIP-Chip data0.42□□□□□ -2.34not detected
YNL054W-BYNL054W-B ACH1P32316 526 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B TMA108P40462 946 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B OSW7P43611 510 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B SMC3P47037 1230 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B PLM2Q04383 521 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B RRP15Q06511 250 aaPredicted RBP0.42□□□□□ -2.34
YNL054W-BYNL054W-B CDC16P09798 840 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B MRP21P38175 177 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B TIM17P39515 158 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B BIT61P47041 543 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B RSN1Q03516 953 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B POB3Q04636 552 aaKnown RBP0.42□□□□□ -2.34
YNL054W-BYNL054W-B TMA17Q12513 150 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B LPD1P09624 499 aaKnown RBP0.42□□□□□ -2.34
YNL054W-BYNL054W-B DAL2P25335 343 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B PAM1P37304 830 aaKnown RBP0.42□□□□□ -2.34
YNL054W-BYNL054W-B SSP120P39931 234 aaKnown RBP0.42□□□□□ -2.34
YNL054W-BYNL054W-B YJL107CP42947 387 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B SAE2P46946 345 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B PFD1P46988 109 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B YLR407WQ06070 228 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B LEA1Q08963 238 aaPredicted RBP0.42□□□□□ -2.34
YNL054W-BYNL054W-B DCS2Q12123 353 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B HOS1Q12214 470 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B COX17Q12287 69 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B YER145C-AA0A023PYF4 145 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B LHS1P36016 881 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B YPT35P38815 214 aaKnown RBP0.42□□□□□ -2.34
YNL054W-BYNL054W-B TAF4P50105 388 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B YAT1P80235 687 aa0.42□□□□□ -2.34
YNL054W-BYNL054W-B HXT4P32467 576 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B TUL1P36096 758 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B PHM8P40025 321 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B MRX1P40050 688 aa0.41□□□□□ -2.34
YNL054W-BYNL054W-B SCS2P40075 244 aaKnown RBP0.41□□□□□ -2.34
YNL054W-BYNL054W-B YNL018CP53976 612 aa0.41□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms