RNA–Protein interactions for RNA: YKL123W

YKL123W, Transcript of Dubious open reading frame, yeast

Gene YKL123W, Length 381 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL123W	YKL123W	YFR020W	P43600	232 aa		3.72	□□□□□ -1.81
YKL123W	YKL123W	COG1	P53079	417 aa		3.72	□□□□□ -1.81
YKL123W	YKL123W	PAP2	P53632	584 aa	Known RBP	3.72	□□□□□ -1.81
YKL123W	YKL123W	ARC35	P53731	342 aa	Known RBP	3.72	□□□□□ -1.81
YKL123W	YKL123W	COX17	Q12287	69 aa		3.72	□□□□□ -1.81
YKL123W	YKL123W	YEF3	P16521	1044 aa	Known RBP	3.71	□□□□□ -1.82
YKL123W	YKL123W	RPB8	P20436	146 aa		3.71	□□□□□ -1.82
YKL123W	YKL123W	GID7	P25569	745 aa		3.71	□□□□□ -1.82
YKL123W	YKL123W	TRS65	P32893	560 aa		3.71	□□□□□ -1.82
YKL123W	YKL123W	TFC3	P34111	1160 aa		3.71	□□□□□ -1.82
YKL123W	YKL123W	MRPL36	P36531	177 aa		3.71	□□□□□ -1.82
YKL123W	YKL123W	RIM2	P38127	377 aa		3.71	□□□□□ -1.82
YKL123W	YKL123W	DHH1	P39517	506 aa	Known RBP	3.71	□□□□□ -1.82
YKL123W	YKL123W	CIA1	Q05583	330 aa		3.71	□□□□□ -1.82
YKL123W	YKL123W	TMA16	Q08687	178 aa		3.71	□□□□□ -1.82
YKL123W	YKL123W	DAP1	Q12091	152 aa		3.71	□□□□□ -1.82
YKL123W	YKL123W	PCD1	Q12524	340 aa		3.71	□□□□□ -1.82
YKL123W	YKL123W	GAC1	P28006	793 aa		3.7	□□□□□ -1.82
YKL123W	YKL123W	PSF2	P40359	213 aa		3.7	□□□□□ -1.82
YKL123W	YKL123W	IMP4	P53941	290 aa	Known RBP	3.7	□□□□□ -1.82
YKL123W	YKL123W	YDR415C	Q04033	374 aa	Predicted RBP	3.7	□□□□□ -1.82
YKL123W	YKL123W	YDL218W	Q07629	317 aa		3.7	□□□□□ -1.82
YKL123W	YKL123W	NYV1	Q12255	253 aa		3.7	□□□□□ -1.82
YKL123W	YKL123W	TPK1	P06244	397 aa		3.69	□□□□□ -1.82
YKL123W	YKL123W	MTF2	P10849	440 aa		3.69	□□□□□ -1.82
YKL123W	YKL123W	GLN3	P18494	730 aa		3.69	□□□□□ -1.82
YKL123W	YKL123W	MSM1	P22438	575 aa		3.69	□□□□□ -1.82
YKL123W	YKL123W	PHO90	P39535	881 aa		3.69	□□□□□ -1.82
YKL123W	YKL123W	ACA1	P39970	489 aa		3.69	□□□□□ -1.82
YKL123W	YKL123W	AZF1	P41696	914 aa		3.69	□□□□□ -1.82
YKL123W	YKL123W	YMR178W	Q03219	274 aa	Known RBP	3.69	□□□□□ -1.82
YKL123W	YKL123W	FCP1	Q03254	732 aa		3.69	□□□□□ -1.82
YKL123W	YKL123W	TFC6	Q06339	672 aa		3.69	□□□□□ -1.82
YKL123W	YKL123W	YBR298C-A	Q8TGK4	73 aa		3.69	□□□□□ -1.82
YKL123W	YKL123W	PDA1	P16387	420 aa	Known RBP	3.68	□□□□□ -1.82
YKL123W	YKL123W	YOX1	P34161	385 aa		3.68	□□□□□ -1.82
YKL123W	YKL123W	MIA40	P36046	403 aa		3.68	□□□□□ -1.82
YKL123W	YKL123W	ESL2	P36168	1195 aa		3.68	□□□□□ -1.82
YKL123W	YKL123W	RGI2	P40188	164 aa		3.68	□□□□□ -1.82
YKL123W	YKL123W	PKP1	P40530	394 aa		3.68	□□□□□ -1.82
YKL123W	YKL123W	YOL057W	Q08225	711 aa		3.68	□□□□□ -1.82
YKL123W	YKL123W	CSR2	Q12734	1121 aa		3.68	□□□□□ -1.82
YKL123W	YKL123W	VCX1	Q99385	411 aa		3.68	□□□□□ -1.82
YKL123W	YKL123W	UBC1	P21734	215 aa	Known RBP	3.67	□□□□□ -1.82
YKL123W	YKL123W	IFA38	P38286	347 aa		3.67	□□□□□ -1.82
YKL123W	YKL123W	YIL060W	P40519	144 aa		3.67	□□□□□ -1.82
YKL123W	YKL123W	IST3	P40565	148 aa	Predicted RBP	3.67	□□□□□ -1.82
YKL123W	YKL123W	GUF1	P46943	645 aa		3.67	□□□□□ -1.82
YKL123W	YKL123W	CTF18	P49956	741 aa		3.67	□□□□□ -1.82
YKL123W	YKL123W	IST1	P53843	298 aa	Predicted RBP	3.67	□□□□□ -1.82
YKL123W	YKL123W	MRPL13	Q02204	264 aa		3.67	□□□□□ -1.82
YKL123W	YKL123W	NUP100	Q02629	959 aa		3.67	□□□□□ -1.82
YKL123W	YKL123W	NUC1	P08466	329 aa		3.66	□□□□□ -1.82
YKL123W	YKL123W	APA1	P16550	321 aa	Known RBP	3.66	□□□□□ -1.82
YKL123W	YKL123W	SDS24	P38314	527 aa		3.66	□□□□□ -1.82
YKL123W	YKL123W	ERG7	P38604	731 aa		3.66	□□□□□ -1.82
YKL123W	YKL123W	PFK26	P40433	827 aa	Known RBP	3.66	□□□□□ -1.82
YKL123W	YKL123W	PKP2	P53170	491 aa		3.66	□□□□□ -1.82
YKL123W	YKL123W	YNR061C	P53747	219 aa		3.66	□□□□□ -1.82
YKL123W	YKL123W	CSR1	Q06705	408 aa	Known RBP	3.66	□□□□□ -1.82
YKL123W	YKL123W	YOL159C	Q08300	171 aa		3.66	□□□□□ -1.82
YKL123W	YKL123W	ATG9	Q12142	997 aa		3.66	□□□□□ -1.82
YKL123W	YKL123W	ERG27	Q12452	347 aa	Known RBP	3.66	□□□□□ -1.82
YKL123W	YKL123W	HXK2	P04807	486 aa	Known RBP	3.65	□□□□□ -1.83
YKL123W	YKL123W	PRO3	P32263	286 aa	Known RBP	3.65	□□□□□ -1.83
YKL123W	YKL123W	MIC60	P36112	540 aa		3.65	□□□□□ -1.83
YKL123W	YKL123W	ARP1	P38696	384 aa		3.65	□□□□□ -1.83
YKL123W	YKL123W	KRE9	P39005	276 aa		3.65	□□□□□ -1.83
YKL123W	YKL123W	ROK1	P45818	564 aa	Predicted RBP	3.65	□□□□□ -1.83
YKL123W	YKL123W	NNF2	P53253	936 aa		3.65	□□□□□ -1.83
YKL123W	YKL123W	TMA64	Q04600	565 aa	Known RBP	3.65	□□□□□ -1.83
YKL123W	YKL123W	CDC15	P27636	974 aa		3.64	□□□□□ -1.83
YKL123W	YKL123W	RAD16	P31244	790 aa		3.64	□□□□□ -1.83
YKL123W	YKL123W	ERG1	P32476	496 aa	Known RBP	3.64	□□□□□ -1.83
YKL123W	YKL123W	SPC34	P36131	295 aa		3.64	□□□□□ -1.83
YKL123W	YKL123W	YBR139W	P38109	508 aa		3.64	□□□□□ -1.83
YKL123W	YKL123W	RTS1	P38903	757 aa		3.64	□□□□□ -1.83
YKL123W	YKL123W	DIM1	P41819	318 aa	Known RBP	3.64	□□□□□ -1.83
YKL123W	YKL123W	SMC3	P47037	1230 aa		3.64	□□□□□ -1.83
YKL123W	YKL123W	UBX4	P54730	416 aa		3.64	□□□□□ -1.83
YKL123W	YKL123W	REG1	Q00816	1014 aa		3.64	□□□□□ -1.83
YKL123W	YKL123W	ADE13	Q05911	482 aa	Known RBP	3.64	□□□□□ -1.83
YKL123W	YKL123W	BLS1	Q06071	122 aa		3.64	□□□□□ -1.83
YKL123W	YKL123W	ATG26	Q06321	1198 aa		3.64	□□□□□ -1.83
YKL123W	YKL123W	PPT2	Q12036	173 aa		3.64	□□□□□ -1.83
YKL123W	YKL123W	PRP16	P15938	1071 aa	Predicted RBP	3.63	□□□□□ -1.83
YKL123W	YKL123W	YJR061W	P40355	935 aa		3.63	□□□□□ -1.83
YKL123W	YKL123W	DPB11	P47027	764 aa	Predicted RBP	3.63	□□□□□ -1.83
YKL123W	YKL123W	RRT6	P53117	311 aa	Predicted RBP	3.63	□□□□□ -1.83
YKL123W	YKL123W	PSR2	Q07949	397 aa		3.63	□□□□□ -1.83
YKL123W	YKL123W	PSK2	Q08217	1101 aa		3.63	□□□□□ -1.83
YKL123W	YKL123W	YOR019W	Q99248	730 aa		3.63	□□□□□ -1.83
YKL123W	YKL123W	MRS3	P10566	314 aa		3.62	□□□□□ -1.83
YKL123W	YKL123W	NOP1	P15646	327 aa	Known RBP	3.62	□□□□□ -1.83
YKL123W	YKL123W	ERG8	P24521	451 aa		3.62	□□□□□ -1.83
YKL123W	YKL123W	CPR3	P25719	182 aa		3.62	□□□□□ -1.83
YKL123W	YKL123W	PHD1	P36093	366 aa		3.62	□□□□□ -1.83
YKL123W	YKL123W	PSD1	P39006	500 aa		3.62	□□□□□ -1.83
YKL123W	YKL123W	YER130C	P39959	443 aa		3.62	□□□□□ -1.83
YKL123W	YKL123W	VPS4	P52917	437 aa		3.62	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 44 ms