RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C PLB3Q08108 686 aa3.57□□□□□ -1.84
VPS53YJL029C ZRT2Q12436 422 aa3.57□□□□□ -1.84
VPS53YJL029C LEU1P07264 779 aaKnown RBP3.56□□□□□ -1.84
VPS53YJL029C RRP43P25359 394 aaPredicted RBP3.56□□□□□ -1.84
VPS53YJL029C RFA2P26754 273 aaKnown RBP3.56□□□□□ -1.84
VPS53YJL029C DPB3P27344 201 aa3.56□□□□□ -1.84
VPS53YJL029C UBC6P33296 250 aaPredicted RBP3.56□□□□□ -1.84
VPS53YJL029C BYE1P36106 594 aa3.56□□□□□ -1.84
VPS53YJL029C RRP3P38712 501 aaKnown RBP3.56□□□□□ -1.84
VPS53YJL029C YJL107CP42947 387 aa3.56□□□□□ -1.84
VPS53YJL029C NUP85P46673 744 aa3.56□□□□□ -1.84
VPS53YJL029C NPY1P53164 384 aa3.56□□□□□ -1.84
VPS53YJL029C RIM8P53179 542 aa3.56□□□□□ -1.84
VPS53YJL029C YMR160WQ03823 816 aa3.56□□□□□ -1.84
VPS53YJL029C YDR132CQ03900 495 aa3.56□□□□□ -1.84
VPS53YJL029C VTI1Q04338 217 aa3.56□□□□□ -1.84
VPS53YJL029C RRN11Q04712 507 aa3.56□□□□□ -1.84
VPS53YJL029C SPR28Q04921 423 aa3.56□□□□□ -1.84
VPS53YJL029C YFT2Q06676 274 aa3.56□□□□□ -1.84
VPS53YJL029C RTT10Q08924 1013 aa3.56□□□□□ -1.84
VPS53YJL029C MCD1Q12158 566 aa3.56□□□□□ -1.84
VPS53YJL029C YDR061WQ12298 539 aa3.56□□□□□ -1.84
VPS53YJL029C PET111P08468 800 aa3.56□□□□□ -1.84
VPS53YJL029C INO1P11986 533 aa3.56□□□□□ -1.84
VPS53YJL029C PEP5P12868 1029 aa3.56□□□□□ -1.84
VPS53YJL029C EPT1P22140 391 aa3.56□□□□□ -1.84
VPS53YJL029C VAN1P23642 535 aa3.56□□□□□ -1.84
VPS53YJL029C PUF4P25339 888 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
VPS53YJL029C CIN8P27895 1000 aa3.56□□□□□ -1.84
VPS53YJL029C CNS1P33313 385 aa3.56□□□□□ -1.84
VPS53YJL029C TFC3P34111 1160 aa3.56□□□□□ -1.84
VPS53YJL029C KES1P35844 434 aaKnown RBP3.56□□□□□ -1.84
VPS53YJL029C YPT52P36018 234 aaKnown RBP3.56□□□□□ -1.84
VPS53YJL029C LDB7P38210 180 aa3.56□□□□□ -1.84
VPS53YJL029C MSG5P38590 489 aa3.56□□□□□ -1.84
VPS53YJL029C SMF2P38778 549 aa3.56□□□□□ -1.84
VPS53YJL029C YAL037WP39728 267 aa3.56□□□□□ -1.84
VPS53YJL029C NDC80P40460 691 aa3.56□□□□□ -1.84
VPS53YJL029C SAE2P46946 345 aa3.56□□□□□ -1.84
VPS53YJL029C NNF1P47149 201 aa3.56□□□□□ -1.84
VPS53YJL029C EMC4P53073 190 aa3.56□□□□□ -1.84
VPS53YJL029C ZRG17P53735 605 aa3.56□□□□□ -1.84
VPS53YJL029C SPP2Q02521 185 aa3.56□□□□□ -1.84
VPS53YJL029C PET117Q02771 107 aa3.56□□□□□ -1.84
VPS53YJL029C TFB2Q02939 513 aa3.56□□□□□ -1.84
VPS53YJL029C RPC11Q04307 110 aaPredicted RBP3.56□□□□□ -1.84
VPS53YJL029C YDR278CQ05612 105 aa3.56□□□□□ -1.84
VPS53YJL029C BNA5Q05979 453 aa3.56□□□□□ -1.84
VPS53YJL029C GRS2Q06817 618 aa3.56□□□□□ -1.84
VPS53YJL029C ATG10Q07879 167 aa3.56□□□□□ -1.84
VPS53YJL029C CPA1P07258 411 aaKnown RBP3.55□□□□□ -1.84
VPS53YJL029C RIM1P32445 135 aaKnown RBP3.55□□□□□ -1.84
VPS53YJL029C TAE1P38340 232 aa3.55□□□□□ -1.84
VPS53YJL029C CCT4P39078 528 aaKnown RBP3.55□□□□□ -1.84
VPS53YJL029C SEO1P39709 593 aa3.55□□□□□ -1.84
VPS53YJL029C PXA1P41909 870 aa3.55□□□□□ -1.84
VPS53YJL029C SUN4P53616 420 aa3.55□□□□□ -1.84
VPS53YJL029C UTP6Q02354 440 aaKnown RBP3.55□□□□□ -1.84
VPS53YJL029C ARG7Q04728 441 aa3.55□□□□□ -1.84
VPS53YJL029C CUE5Q08412 411 aaKnown RBP3.55□□□□□ -1.84
VPS53YJL029C YLR149CQ99296 730 aa3.55□□□□□ -1.84
VPS53YJL029C FMP27Q06179 2628 aa3.55□□□□□ -1.84
VPS53YJL029C GAL4P04386 881 aa3.55□□□□□ -1.84
VPS53YJL029C CDC24P11433 854 aaPredicted RBP3.55□□□□□ -1.84
VPS53YJL029C GLN4P13188 809 aaKnown RBP3.55□□□□□ -1.84
VPS53YJL029C RBK1P25332 333 aa3.55□□□□□ -1.84
VPS53YJL029C SPR1P32603 445 aa3.55□□□□□ -1.84
VPS53YJL029C UTR2P32623 467 aa3.55□□□□□ -1.84
VPS53YJL029C BEM3P32873 1128 aa3.55□□□□□ -1.84
VPS53YJL029C TOM20P35180 183 aa3.55□□□□□ -1.84
VPS53YJL029C PIM1P36775 1133 aa3.55□□□□□ -1.84
VPS53YJL029C MRP21P38175 177 aa3.55□□□□□ -1.84
VPS53YJL029C UBS1P38290 277 aa3.55□□□□□ -1.84
VPS53YJL029C LEU5P38702 357 aa3.55□□□□□ -1.84
VPS53YJL029C CYC2P38909 366 aa3.55□□□□□ -1.84
VPS53YJL029C TAT2P38967 592 aa3.55□□□□□ -1.84
VPS53YJL029C SEC28P40509 296 aaKnown RBP3.55□□□□□ -1.84
VPS53YJL029C OSW7P43611 510 aa3.55□□□□□ -1.84
VPS53YJL029C SCW11P53189 542 aa3.55□□□□□ -1.84
VPS53YJL029C YAT1P80235 687 aa3.55□□□□□ -1.84
VPS53YJL029C NAM8Q00539 523 aaKnown RBP3.55□□□□□ -1.84
VPS53YJL029C EGD1Q02642 157 aaKnown RBP3.55□□□□□ -1.84
VPS53YJL029C YML096WQ04489 525 aa3.55□□□□□ -1.84
VPS53YJL029C YLR456WQ06199 204 aa3.55□□□□□ -1.84
VPS53YJL029C SMF3Q12078 473 aaPredicted RBP3.55□□□□□ -1.84
VPS53YJL029C YPR089WO13585 888 aa3.54□□□□□ -1.84
VPS53YJL029C GCR1P07261 785 aa3.54□□□□□ -1.84
VPS53YJL029C SWI5P08153 709 aa3.54□□□□□ -1.84
VPS53YJL029C ABF1P14164 731 aa3.54□□□□□ -1.84
VPS53YJL029C SPO16P17122 198 aa3.54□□□□□ -1.84
VPS53YJL029C YSR3P23501 404 aa3.54□□□□□ -1.84
VPS53YJL029C IRS4P36115 615 aaKnown RBP3.54□□□□□ -1.84
VPS53YJL029C GMH1P36125 273 aa3.54□□□□□ -1.84
VPS53YJL029C VHC1P38329 1120 aa3.54□□□□□ -1.84
VPS53YJL029C GND1P38720 489 aaKnown RBP3.54□□□□□ -1.84
VPS53YJL029C MNN1P39106 762 aa3.54□□□□□ -1.84
VPS53YJL029C YIL108WP40483 696 aaKnown RBP3.54□□□□□ -1.84
VPS53YJL029C GTS1P40956 396 aa3.54□□□□□ -1.84
VPS53YJL029C SAP4P53036 818 aa3.54□□□□□ -1.84
VPS53YJL029C SNO2P53823 222 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms