RNA–Protein interactions for RNA: YHR192W

LNP1, Transcript of Lunapark family member involved in ER network formation, yeastyeast

Gene LNP1, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LNP1YHR192W DCI1Q08558 271 aa4.8□□□□□ -1.64
LNP1YHR192W RPN5Q12250 445 aaKnown RBP4.8□□□□□ -1.64
LNP1YHR192W CEX1Q12453 761 aa4.8□□□□□ -1.64
LNP1YHR192W AVL9Q12500 764 aa4.8□□□□□ -1.64
LNP1YHR192W SEC39Q12745 709 aa4.8□□□□□ -1.64
LNP1YHR192W HRP1Q99383 534 aaKnown RBP4.8□□□□□ -1.64
LNP1YHR192W LAT1P12695 482 aaKnown RBP4.79□□□□□ -1.64
LNP1YHR192W PRP4P20053 465 aaKnown RBP4.79□□□□□ -1.64
LNP1YHR192W GRR1P24814 1151 aa4.79□□□□□ -1.64
LNP1YHR192W LRE1P25579 583 aaKnown RBP4.79□□□□□ -1.64
LNP1YHR192W FEN2P25621 512 aaKnown RBP4.79□□□□□ -1.64
LNP1YHR192W URK1P27515 501 aa4.79□□□□□ -1.64
LNP1YHR192W SYN8P31377 255 aa4.79□□□□□ -1.64
LNP1YHR192W RIB7P33312 244 aa4.79□□□□□ -1.64
LNP1YHR192W NIP100P33420 868 aa4.79□□□□□ -1.64
LNP1YHR192W LTV1P34078 463 aa4.79□□□□□ -1.64
LNP1YHR192W SIF2P38262 535 aa4.79□□□□□ -1.64
LNP1YHR192W GET2P40056 285 aa4.79□□□□□ -1.64
LNP1YHR192W BUL1P48524 976 aa4.79□□□□□ -1.64
LNP1YHR192W STR3P53101 465 aaKnown RBP4.79□□□□□ -1.64
LNP1YHR192W TWF1P53250 332 aa4.79□□□□□ -1.64
LNP1YHR192W YGR111WP53265 400 aa4.79□□□□□ -1.64
LNP1YHR192W MRD1Q06106 887 aaKnown RBP4.79□□□□□ -1.64
LNP1YHR192W SPH1Q06160 661 aa4.79□□□□□ -1.64
LNP1YHR192W YLR040CQ07988 224 aa4.79□□□□□ -1.64
LNP1YHR192W FRE5Q08908 694 aa4.79□□□□□ -1.64
LNP1YHR192W FMP40Q08968 688 aaPredicted RBP4.79□□□□□ -1.64
LNP1YHR192W MDY2Q12285 212 aa4.79□□□□□ -1.64
LNP1YHR192W GAL80P04387 435 aa4.78□□□□□ -1.64
LNP1YHR192W RPL3P14126 387 aaKnown RBP4.78□□□□□ -1.64
LNP1YHR192W EST1P17214 699 aaPredicted RBP4.78□□□□□ -1.64
LNP1YHR192W APN1P22936 367 aa4.78□□□□□ -1.64
LNP1YHR192W ERG6P25087 383 aaKnown RBP4.78□□□□□ -1.64
LNP1YHR192W YCR061WP25639 631 aa4.78□□□□□ -1.64
LNP1YHR192W ERV1P27882 189 aa4.78□□□□□ -1.64
LNP1YHR192W SEF1P34228 1148 aa4.78□□□□□ -1.64
LNP1YHR192W MAF1P41910 395 aa4.78□□□□□ -1.64
LNP1YHR192W DLD2P46681 530 aaKnown RBP4.78□□□□□ -1.64
LNP1YHR192W YGR054WP53235 642 aaKnown RBP4.78□□□□□ -1.64
LNP1YHR192W RIA1P53893 1110 aa4.78□□□□□ -1.64
LNP1YHR192W YNL144CP53907 740 aa4.78□□□□□ -1.64
LNP1YHR192W GTB1Q04924 702 aa4.78□□□□□ -1.64
LNP1YHR192W VTA1Q06263 330 aa4.78□□□□□ -1.64
LNP1YHR192W YOL073CQ08232 322 aa4.78□□□□□ -1.64
LNP1YHR192W RTC5Q12108 567 aaKnown RBP4.78□□□□□ -1.64
LNP1YHR192W HIR3P47171 1648 aa4.78□□□□□ -1.64
LNP1YHR192W YEL043WP32618 956 aa4.77□□□□□ -1.65
LNP1YHR192W HCS1P34243 683 aa4.77□□□□□ -1.65
LNP1YHR192W SUL1P38359 859 aa4.77□□□□□ -1.65
LNP1YHR192W MUP3P38734 546 aa4.77□□□□□ -1.65
LNP1YHR192W NUP60P39705 539 aa4.77□□□□□ -1.65
LNP1YHR192W SEC24P40482 926 aaKnown RBP4.77□□□□□ -1.65
LNP1YHR192W YIL089WP40500 205 aa4.77□□□□□ -1.65
LNP1YHR192W HXT14P42833 540 aa4.77□□□□□ -1.65
LNP1YHR192W PET130P47065 347 aa4.77□□□□□ -1.65
LNP1YHR192W MTL1P53214 551 aa4.77□□□□□ -1.65
LNP1YHR192W YNR068CP53754 272 aa4.77□□□□□ -1.65
LNP1YHR192W RSM28Q03430 361 aa4.77□□□□□ -1.65
LNP1YHR192W ARX1Q03862 593 aaKnown RBP4.77□□□□□ -1.65
LNP1YHR192W MGR3Q04472 501 aa4.77□□□□□ -1.65
LNP1YHR192W ARG7Q04728 441 aa4.77□□□□□ -1.65
LNP1YHR192W DON1Q05610 365 aa4.77□□□□□ -1.65
LNP1YHR192W SGT2Q12118 346 aaKnown RBP4.77□□□□□ -1.65
LNP1YHR192W SPE4Q12455 300 aa4.77□□□□□ -1.65
LNP1YHR192W YER175W-AQ8TGU4 54 aa4.77□□□□□ -1.65
LNP1YHR192W ARD1P07347 238 aaPredicted RBP4.76□□□□□ -1.65
LNP1YHR192W PDA1P16387 420 aaKnown RBP4.76□□□□□ -1.65
LNP1YHR192W PDB1P32473 366 aaKnown RBP4.76□□□□□ -1.65
LNP1YHR192W PMT1P33775 817 aa4.76□□□□□ -1.65
LNP1YHR192W RRP1P35178 278 aaPredicted RBP4.76□□□□□ -1.65
LNP1YHR192W HEL1P36113 551 aa4.76□□□□□ -1.65
LNP1YHR192W FUN12P39730 1002 aaKnown RBP4.76□□□□□ -1.65
LNP1YHR192W ALG5P40350 334 aa4.76□□□□□ -1.65
LNP1YHR192W SEC27P41811 889 aaKnown RBP4.76□□□□□ -1.65
LNP1YHR192W CTK2P46962 323 aa4.76□□□□□ -1.65
LNP1YHR192W IRC8P47046 822 aa4.76□□□□□ -1.65
LNP1YHR192W YGL036WP53185 909 aaPredicted RBP4.76□□□□□ -1.65
LNP1YHR192W SNF12P53628 566 aa4.76□□□□□ -1.65
LNP1YHR192W ARP5P53946 755 aa4.76□□□□□ -1.65
LNP1YHR192W BOP3P53958 396 aa4.76□□□□□ -1.65
LNP1YHR192W RPA49Q01080 415 aaPredicted RBP4.76□□□□□ -1.65
LNP1YHR192W HEL2Q05580 639 aaKnown RBP4.76□□□□□ -1.65
LNP1YHR192W MMR1Q06324 491 aa4.76□□□□□ -1.65
LNP1YHR192W ARR3Q06598 404 aa4.76□□□□□ -1.65
LNP1YHR192W VPS54Q12071 889 aa4.76□□□□□ -1.65
LNP1YHR192W CHS5Q12114 671 aaKnown RBP4.76□□□□□ -1.65
LNP1YHR192W HER1Q12276 1246 aa4.76□□□□□ -1.65
LNP1YHR192W TPK2P06245 380 aa4.75□□□□□ -1.65
LNP1YHR192W SRV2P17555 526 aaKnown RBP4.75□□□□□ -1.65
LNP1YHR192W MVD1P32377 396 aaKnown RBP4.75□□□□□ -1.65
LNP1YHR192W NIP1P32497 812 aaKnown RBP4.75□□□□□ -1.65
LNP1YHR192W SIP1P32578 815 aa4.75□□□□□ -1.65
LNP1YHR192W BCS1P32839 456 aa4.75□□□□□ -1.65
LNP1YHR192W EBP2P36049 427 aaKnown RBP4.75□□□□□ -1.65
LNP1YHR192W RRT2P38332 387 aa4.75□□□□□ -1.65
LNP1YHR192W YNG2P38806 282 aaKnown RBP4.75□□□□□ -1.65
LNP1YHR192W VPS45P38932 577 aa4.75□□□□□ -1.65
LNP1YHR192W CCT6P39079 546 aa4.75□□□□□ -1.65
LNP1YHR192W BUD16P39988 312 aa4.75□□□□□ -1.65
LNP1YHR192W SGN1P40561 250 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
Retrieved 100 of 5,963 RNA–protein pairs in 80.2 ms