RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C RPR2P40571 144 aa2.53□□□□□ -2
RTR1YER139C SMK1P41808 388 aa2.53□□□□□ -2
RTR1YER139C CTK2P46962 323 aa2.53□□□□□ -2
RTR1YER139C RTT101P47050 842 aa2.53□□□□□ -2
RTR1YER139C TDA7P53882 636 aaPredicted RBP2.53□□□□□ -2
RTR1YER139C RPM2Q02773 1202 aa2.53□□□□□ -2
RTR1YER139C SOD1P00445 154 aaKnown RBP2.52□□□□□ -2.01
RTR1YER139C TFC4P33339 1025 aa2.52□□□□□ -2.01
RTR1YER139C PHD1P36093 366 aa2.52□□□□□ -2.01
RTR1YER139C ENP1P38333 483 aaKnown RBP2.52□□□□□ -2.01
RTR1YER139C STT3P39007 718 aaKnown RBP2.52□□□□□ -2.01
RTR1YER139C PHO90P39535 881 aa2.52□□□□□ -2.01
RTR1YER139C PKP2P53170 491 aa2.52□□□□□ -2.01
RTR1YER139C CNM67P53865 581 aaKnown RBP2.52□□□□□ -2.01
RTR1YER139C RBA50Q04418 439 aa2.52□□□□□ -2.01
RTR1YER139C FMP45Q07651 309 aa2.52□□□□□ -2.01
RTR1YER139C LHS1P36016 881 aa2.51□□□□□ -2.01
RTR1YER139C SRO77P38163 1010 aa2.51□□□□□ -2.01
RTR1YER139C COG6P53959 839 aa2.51□□□□□ -2.01
RTR1YER139C ERP1Q05359 219 aaKnown RBP2.51□□□□□ -2.01
RTR1YER139C YEH2Q07950 538 aa2.51□□□□□ -2.01
RTR1YER139C ARP7Q12406 477 aa2.51□□□□□ -2.01
RTR1YER139C SIR1P21691 654 aa2.5□□□□□ -2.01
RTR1YER139C RIT1P23796 513 aa2.5□□□□□ -2.01
RTR1YER139C MCM4P30665 933 aaKnown RBP2.5□□□□□ -2.01
RTR1YER139C ACH1P32316 526 aa2.5□□□□□ -2.01
RTR1YER139C MAD3P47074 515 aa2.5□□□□□ -2.01
RTR1YER139C YJR120WP47157 116 aa2.5□□□□□ -2.01
RTR1YER139C ADE3P07245 946 aaKnown RBP2.49□□□□□ -2.01
RTR1YER139C FPR3P38911 411 aaKnown RBP2.49□□□□□ -2.01
RTR1YER139C MRX1P40050 688 aa2.49□□□□□ -2.01
RTR1YER139C MSS11Q03825 758 aa2.49□□□□□ -2.01
RTR1YER139C TMC1Q08422 150 aaPredicted RBP2.49□□□□□ -2.01
RTR1YER139C NDC1P32500 655 aa2.48□□□□□ -2.01
RTR1YER139C GCD7P32502 381 aaPredicted RBP2.48□□□□□ -2.01
RTR1YER139C IDP2P41939 412 aa2.48□□□□□ -2.01
RTR1YER139C CEG1Q01159 459 aaPredicted RBP2.48□□□□□ -2.01
RTR1YER139C TMA17Q12513 150 aa2.48□□□□□ -2.01
RTR1YER139C NAT1P12945 854 aaKnown RBP2.47□□□□□ -2.01
RTR1YER139C MTF1P14908 341 aaKnown RBP2.47□□□□□ -2.01
RTR1YER139C SWI4P25302 1093 aaKnown RBP2.47□□□□□ -2.01
RTR1YER139C GAC1P28006 793 aa2.47□□□□□ -2.01
RTR1YER139C SOF1P33750 489 aaKnown RBP2.47□□□□□ -2.01
RTR1YER139C ECM10P39987 644 aa2.47□□□□□ -2.01
RTR1YER139C PAL1Q05518 499 aaKnown RBP2.47□□□□□ -2.01
RTR1YER139C NTR2P36118 322 aaPredicted RBP2.46□□□□□ -2.02
RTR1YER139C GEX2P36173 615 aa2.46□□□□□ -2.02
RTR1YER139C AAP1P37898 856 aaKnown RBP2.46□□□□□ -2.02
RTR1YER139C UBP12P39538 1254 aa2.46□□□□□ -2.02
RTR1YER139C YFR020WP43600 232 aa2.46□□□□□ -2.02
RTR1YER139C TIS11P47977 285 aa2.46□□□□□ -2.02
RTR1YER139C HEL2Q05580 639 aaKnown RBP2.46□□□□□ -2.02
RTR1YER139C CRN1Q06440 651 aa2.46□□□□□ -2.02
RTR1YER139C SWT1Q12104 458 aa2.46□□□□□ -2.02
RTR1YER139C YCL021W-AQ96VH3 125 aa2.46□□□□□ -2.02
RTR1YER139C POL3P15436 1097 aa2.45□□□□□ -2.02
RTR1YER139C ARP2P32381 391 aaKnown RBP2.45□□□□□ -2.02
RTR1YER139C PTR2P32901 601 aa2.45□□□□□ -2.02
RTR1YER139C MSN2P33748 704 aa2.45□□□□□ -2.02
RTR1YER139C MIA40P36046 403 aa2.45□□□□□ -2.02
RTR1YER139C SDT1P53078 280 aa2.45□□□□□ -2.02
RTR1YER139C SOL4P53315 255 aa2.45□□□□□ -2.02
RTR1YER139C MHR1Q06630 226 aa2.45□□□□□ -2.02
RTR1YER139C GRC3Q07845 632 aa2.45□□□□□ -2.02
RTR1YER139C CDC45Q08032 650 aa2.45□□□□□ -2.02
RTR1YER139C AYT1Q12226 474 aa2.45□□□□□ -2.02
RTR1YER139C HEM2P05373 342 aa2.44□□□□□ -2.02
RTR1YER139C BIK1P11709 440 aa2.44□□□□□ -2.02
RTR1YER139C TYR1P20049 452 aa2.44□□□□□ -2.02
RTR1YER139C SPC110P32380 944 aa2.44□□□□□ -2.02
RTR1YER139C MTC4P38335 694 aaKnown RBP2.44□□□□□ -2.02
RTR1YER139C AXL1P40851 1208 aa2.44□□□□□ -2.02
RTR1YER139C ERR3P42222 437 aa2.44□□□□□ -2.02
RTR1YER139C SWP82P43554 623 aa2.44□□□□□ -2.02
RTR1YER139C PEX14P53112 341 aa2.44□□□□□ -2.02
RTR1YER139C YGL039WP53183 348 aaKnown RBP2.44□□□□□ -2.02
RTR1YER139C RDR1Q08904 546 aa2.44□□□□□ -2.02
RTR1YER139C ARP6Q12509 438 aa2.44□□□□□ -2.02
RTR1YER139C IMA1P53051 589 aa2.43□□□□□ -2.02
RTR1YER139C RSM28Q03430 361 aa2.43□□□□□ -2.02
RTR1YER139C IWR1Q07532 353 aaPredicted RBP2.43□□□□□ -2.02
RTR1YER139C SPR1P32603 445 aa2.42□□□□□ -2.02
RTR1YER139C ARP1P38696 384 aa2.42□□□□□ -2.02
RTR1YER139C ATG26Q06321 1198 aa2.42□□□□□ -2.02
RTR1YER139C YDL012CQ12489 107 aa2.42□□□□□ -2.02
RTR1YER139C RPL20AP0CX23 172 aaKnown RBP2.41□□□□□ -2.02
RTR1YER139C RPL20BP0CX24 172 aaPredicted RBP2.41□□□□□ -2.02
RTR1YER139C PRS1P32895 427 aaKnown RBP2.41□□□□□ -2.02
RTR1YER139C SIP2P34164 415 aaKnown RBP2.41□□□□□ -2.02
RTR1YER139C YTA12P40341 825 aa2.41□□□□□ -2.02
RTR1YER139C YIL161WP40449 235 aaKnown RBP2.41□□□□□ -2.02
RTR1YER139C YMR087WQ04299 284 aa2.41□□□□□ -2.02
RTR1YER139C EIS1Q05050 843 aaKnown RBP2.41□□□□□ -2.02
RTR1YER139C ADE13Q05911 482 aaKnown RBP2.41□□□□□ -2.02
RTR1YER139C PDH1Q12428 516 aaKnown RBP2.41□□□□□ -2.02
RTR1YER139C PMR1P13586 950 aa2.4□□□□□ -2.03
RTR1YER139C RFS1P38234 210 aaKnown RBP2.4□□□□□ -2.03
RTR1YER139C RPN11P43588 306 aaKnown RBP2.4□□□□□ -2.03
RTR1YER139C YGL082WP53155 381 aa2.4□□□□□ -2.03
RTR1YER139C NNF2P53253 936 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms