RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W BSP1Q06604 576 aa7.06□□□□□ -1.28
LCP5YER127W LYS21Q12122 440 aaKnown RBP7.06□□□□□ -1.28
LCP5YER127W CDC16P09798 840 aa7.05□□□□□ -1.28
LCP5YER127W NUP1P20676 1076 aa7.05□□□□□ -1.28
LCP5YER127W SAN1P22470 610 aa7.05□□□□□ -1.28
LCP5YER127W ASG1P40467 964 aa7.05□□□□□ -1.28
LCP5YER127W IME4P41833 600 aa7.05□□□□□ -1.28
LCP5YER127W YPR003CP53394 754 aa7.05□□□□□ -1.28
LCP5YER127W TPO3Q06451 622 aa7.05□□□□□ -1.28
LCP5YER127W VIP1Q06685 1146 aaKnown RBP7.05□□□□□ -1.28
LCP5YER127W THI3Q07471 609 aa7.05□□□□□ -1.28
LCP5YER127W ENT4Q07872 247 aa7.05□□□□□ -1.28
LCP5YER127W RAV1P47104 1357 aa7.05□□□□□ -1.28
LCP5YER127W PCT1P13259 424 aa7.04□□□□□ -1.28
LCP5YER127W MAK32P23060 363 aa7.04□□□□□ -1.28
LCP5YER127W FMP10P40098 244 aa7.04□□□□□ -1.28
LCP5YER127W SIP4P46954 829 aa7.04□□□□□ -1.28
LCP5YER127W MUB1Q03162 620 aa7.04□□□□□ -1.28
LCP5YER127W SNU56Q03782 492 aaKnown RBP7.04□□□□□ -1.28
LCP5YER127W ORM2Q06144 216 aa7.04□□□□□ -1.28
LCP5YER127W IMH1Q06704 911 aaKnown RBP7.04□□□□□ -1.28
LCP5YER127W YOR111WQ99210 232 aa7.04□□□□□ -1.28
LCP5YER127W CDC24P11433 854 aaPredicted RBP7.03□□□□□ -1.28
LCP5YER127W PRE8P23639 250 aa7.03□□□□□ -1.28
LCP5YER127W ORC2P32833 620 aa7.03□□□□□ -1.28
LCP5YER127W LHS1P36016 881 aa7.03□□□□□ -1.28
LCP5YER127W UBP13P38187 747 aa7.03□□□□□ -1.28
LCP5YER127W SWP82P43554 623 aa7.03□□□□□ -1.28
LCP5YER127W YNR061CP53747 219 aa7.03□□□□□ -1.28
LCP5YER127W ILS1P09436 1072 aaKnown RBP7.02□□□□□ -1.29
LCP5YER127W AAC3P18238 307 aa7.02□□□□□ -1.29
LCP5YER127W URE2P23202 354 aaKnown RBP7.02□□□□□ -1.29
LCP5YER127W MSS51P32335 436 aa7.02□□□□□ -1.29
LCP5YER127W PAH1P32567 862 aa7.02□□□□□ -1.29
LCP5YER127W SOF1P33750 489 aaKnown RBP7.02□□□□□ -1.29
LCP5YER127W CUE2P36075 443 aaKnown RBP7.02□□□□□ -1.29
LCP5YER127W NTR2P36118 322 aaPredicted RBP7.02□□□□□ -1.29
LCP5YER127W ERV46P39727 415 aa7.02□□□□□ -1.29
LCP5YER127W MRX1P40050 688 aa7.02□□□□□ -1.29
LCP5YER127W SLZ1P40167 298 aa7.02□□□□□ -1.29
LCP5YER127W CIN1P40987 1014 aa7.02□□□□□ -1.29
LCP5YER127W ARC1P46672 376 aaKnown RBP7.02□□□□□ -1.29
LCP5YER127W COG4Q06096 861 aa7.02□□□□□ -1.29
LCP5YER127W IRC3Q06683 689 aa7.02□□□□□ -1.29
LCP5YER127W YLR111WQ12528 110 aa7.02□□□□□ -1.29
LCP5YER127W YBR085C-AO43137 85 aa7.01□□□□□ -1.29
LCP5YER127W SRP54P20424 541 aaKnown RBP7.01□□□□□ -1.29
LCP5YER127W ADE17P38009 592 aaKnown RBP7.01□□□□□ -1.29
LCP5YER127W ERP2P39704 215 aa7.01□□□□□ -1.29
LCP5YER127W NOP16P40007 231 aaKnown RBP7.01□□□□□ -1.29
LCP5YER127W PHM8P40025 321 aa7.01□□□□□ -1.29
LCP5YER127W BPL1P48445 690 aaPredicted RBP7.01□□□□□ -1.29
LCP5YER127W PIL1P53252 339 aaKnown RBP7.01□□□□□ -1.29
LCP5YER127W RSM28Q03430 361 aa7.01□□□□□ -1.29
LCP5YER127W RAD30Q04049 632 aa7.01□□□□□ -1.29
LCP5YER127W CET1O13297 549 aaPredicted RBP7□□□□□ -1.29
LCP5YER127W ESL2P36168 1195 aa7□□□□□ -1.29
LCP5YER127W AAP1P37898 856 aaKnown RBP7□□□□□ -1.29
LCP5YER127W SEC31P38968 1273 aaKnown RBP7□□□□□ -1.29
LCP5YER127W LGE1Q02796 332 aaKnown RBP7□□□□□ -1.29
LCP5YER127W THI7Q05998 598 aa7□□□□□ -1.29
LCP5YER127W FRE7Q12333 620 aa7□□□□□ -1.29
LCP5YER127W RRI2Q12348 645 aa7□□□□□ -1.29
LCP5YER127W TAD3Q9URQ3 322 aa7□□□□□ -1.29
LCP5YER127W MRP2P10663 115 aaPredicted RBP6.99□□□□□ -1.29
LCP5YER127W APN1P22936 367 aa6.99□□□□□ -1.29
LCP5YER127W RPN12P32496 274 aa6.99□□□□□ -1.29
LCP5YER127W SEC24P40482 926 aaKnown RBP6.99□□□□□ -1.29
LCP5YER127W IRC7P43623 340 aa6.99□□□□□ -1.29
LCP5YER127W AAD10P47182 288 aa6.99□□□□□ -1.29
LCP5YER127W ORC5P50874 479 aa6.99□□□□□ -1.29
LCP5YER127W INN1P53901 409 aa6.99□□□□□ -1.29
LCP5YER127W YSA1Q01976 231 aa6.99□□□□□ -1.29
LCP5YER127W SKG3Q06315 1026 aa6.99□□□□□ -1.29
LCP5YER127W GPN2Q08726 347 aaPredicted RBP6.99□□□□□ -1.29
LCP5YER127W HUA2Q12134 243 aa6.99□□□□□ -1.29
LCP5YER127W NDJ1Q12366 352 aa6.99□□□□□ -1.29
LCP5YER127W RAD9P14737 1309 aa6.99□□□□□ -1.29
LCP5YER127W YCR006CP25350 157 aa6.98□□□□□ -1.29
LCP5YER127W YBL029WP38201 376 aa6.98□□□□□ -1.29
LCP5YER127W RTS1P38903 757 aa6.98□□□□□ -1.29
LCP5YER127W ATF1P40353 525 aa6.98□□□□□ -1.29
LCP5YER127W JHD1P40034 492 aa6.97□□□□□ -1.29
LCP5YER127W UPF3P48412 387 aaKnown RBP6.97□□□□□ -1.29
LCP5YER127W YGL036WP53185 909 aaPredicted RBP6.97□□□□□ -1.29
LCP5YER127W RIX7Q07844 837 aaKnown RBP6.97□□□□□ -1.29
LCP5YER127W TCO89Q08921 799 aa6.97□□□□□ -1.29
LCP5YER127W YLR049CQ12110 428 aa6.97□□□□□ -1.29
LCP5YER127W YNL162W-AQ3E7A8 72 aa6.97□□□□□ -1.29
LCP5YER127W YBR126W-AQ8TGU7 68 aa6.97□□□□□ -1.29
LCP5YER127W NMD5P46970 1048 aa6.96□□□□□ -1.3
LCP5YER127W DUO1P53168 247 aaKnown RBP6.96□□□□□ -1.3
LCP5YER127W PDR8Q06149 701 aa6.96□□□□□ -1.3
LCP5YER127W PGK1P00560 416 aaKnown RBP6.95□□□□□ -1.3
LCP5YER127W PET111P08468 800 aa6.95□□□□□ -1.3
LCP5YER127W RPL19AP0CX82 189 aaKnown RBP6.95□□□□□ -1.3
LCP5YER127W RPL19BP0CX83 189 aaPredicted RBP6.95□□□□□ -1.3
LCP5YER127W MAL33P38157 468 aa6.95□□□□□ -1.3
LCP5YER127W ECM10P39987 644 aa6.95□□□□□ -1.3
LCP5YER127W BUR6P40096 142 aa6.95□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 585.8 ms