RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	VCX1	Q99385	411 aa		2.26	□□□□□ -2.05
DOT6	YER088C	TY3B-I	Q7LHG5	1498 aa	Known RBP	2.26	□□□□□ -2.05
DOT6	YER088C	CHO1	P08456	276 aa		2.25	□□□□□ -2.05
DOT6	YER088C	GPA1	P08539	472 aa		2.25	□□□□□ -2.05
DOT6	YER088C	ILS1	P09436	1072 aa	Known RBP	2.25	□□□□□ -2.05
DOT6	YER088C	SPO16	P17122	198 aa		2.25	□□□□□ -2.05
DOT6	YER088C	CNA1	P23287	553 aa		2.25	□□□□□ -2.05
DOT6	YER088C	CBF2	P32504	956 aa		2.25	□□□□□ -2.05
DOT6	YER088C	OCT1	P35999	772 aa		2.25	□□□□□ -2.05
DOT6	YER088C	FMP10	P40098	244 aa		2.25	□□□□□ -2.05
DOT6	YER088C	UBX6	P47049	396 aa		2.25	□□□□□ -2.05
DOT6	YER088C	AAT1	Q01802	451 aa		2.25	□□□□□ -2.05
DOT6	YER088C	YPL068C	Q02749	293 aa		2.25	□□□□□ -2.05
DOT6	YER088C	SWA2	Q06677	668 aa		2.25	□□□□□ -2.05
DOT6	YER088C	TMA16	Q08687	178 aa		2.25	□□□□□ -2.05
DOT6	YER088C	YER145C-A	A0A023PYF4	145 aa		2.25	□□□□□ -2.05
DOT6	YER088C	SNF2	P22082	1703 aa		2.25	□□□□□ -2.05
DOT6	YER088C	AIM17	P23180	465 aa	Known RBP	2.25	□□□□□ -2.05
DOT6	YER088C	GCD7	P32502	381 aa	Predicted RBP	2.25	□□□□□ -2.05
DOT6	YER088C	UBP13	P38187	747 aa		2.25	□□□□□ -2.05
DOT6	YER088C	MNT3	P40549	630 aa		2.25	□□□□□ -2.05
DOT6	YER088C	RPN11	P43588	306 aa	Known RBP	2.25	□□□□□ -2.05
DOT6	YER088C	ASE1	P50275	885 aa		2.25	□□□□□ -2.05
DOT6	YER088C	ROM2	P51862	1356 aa	Known RBP	2.25	□□□□□ -2.05
DOT6	YER088C	VTC3	Q02725	835 aa		2.25	□□□□□ -2.05
DOT6	YER088C	YLR455W	Q06188	304 aa		2.25	□□□□□ -2.05
DOT6	YER088C	GPN2	Q08726	347 aa	Predicted RBP	2.25	□□□□□ -2.05
DOT6	YER088C	RGT2	Q12300	763 aa		2.25	□□□□□ -2.05
DOT6	YER088C	ICT1	Q12385	394 aa		2.25	□□□□□ -2.05
DOT6	YER088C	PET111	P08468	800 aa		2.24	□□□□□ -2.05
DOT6	YER088C	RPB2	P08518	1224 aa	Known RBP	2.24	□□□□□ -2.05
DOT6	YER088C	GUK1	P15454	187 aa	Known RBP	2.24	□□□□□ -2.05
DOT6	YER088C	TMT1	P32643	299 aa		2.24	□□□□□ -2.05
DOT6	YER088C	MRS6	P32864	603 aa	Known RBP	2.24	□□□□□ -2.05
DOT6	YER088C	AAP1	P37898	856 aa	Known RBP	2.24	□□□□□ -2.05
DOT6	YER088C	TOM71	P38825	639 aa	Known RBP	2.24	□□□□□ -2.05
DOT6	YER088C	AXL2	P38928	823 aa		2.24	□□□□□ -2.05
DOT6	YER088C	YIL161W	P40449	235 aa	Known RBP	2.24	□□□□□ -2.05
DOT6	YER088C	GAT1	P43574	510 aa		2.24	□□□□□ -2.05
DOT6	YER088C	DCP2	P53550	970 aa	Known RBP	2.24	□□□□□ -2.05
DOT6	YER088C	YML131W	Q03102	365 aa		2.24	□□□□□ -2.05
DOT6	YER088C	CAC2	Q04199	468 aa		2.24	□□□□□ -2.05
DOT6	YER088C	PSK2	Q08217	1101 aa		2.24	□□□□□ -2.05
DOT6	YER088C	YOL087C	Q99247	1116 aa		2.24	□□□□□ -2.05
DOT6	YER088C	YPR089W	O13585	888 aa		2.24	□□□□□ -2.05
DOT6	YER088C	TPK1	P06244	397 aa		2.24	□□□□□ -2.05
DOT6	YER088C	TRX2	P22803	104 aa	Known RBP	2.24	□□□□□ -2.05
DOT6	YER088C	ERG8	P24521	451 aa		2.24	□□□□□ -2.05
DOT6	YER088C	STE50	P25344	346 aa		2.24	□□□□□ -2.05
DOT6	YER088C	SRB5	P32585	307 aa		2.24	□□□□□ -2.05
DOT6	YER088C	NUP120	P35729	1037 aa		2.24	□□□□□ -2.05
DOT6	YER088C	ASK1	P35734	292 aa		2.24	□□□□□ -2.05
DOT6	YER088C	NTR2	P36118	322 aa	Predicted RBP	2.24	□□□□□ -2.05
DOT6	YER088C	PXL1	P36166	706 aa		2.24	□□□□□ -2.05
DOT6	YER088C	MRPL36	P36531	177 aa		2.24	□□□□□ -2.05
DOT6	YER088C	ADE17	P38009	592 aa	Known RBP	2.24	□□□□□ -2.05
DOT6	YER088C	LEU5	P38702	357 aa		2.24	□□□□□ -2.05
DOT6	YER088C	FLO5	P38894	1075 aa		2.24	□□□□□ -2.05
DOT6	YER088C	NPR2	P39923	615 aa		2.24	□□□□□ -2.05
DOT6	YER088C	YER010C	P40011	234 aa		2.24	□□□□□ -2.05
DOT6	YER088C	FAF1	P40546	346 aa	Predicted RBP	2.24	□□□□□ -2.05
DOT6	YER088C	DOT5	P40553	215 aa		2.24	□□□□□ -2.05
DOT6	YER088C	IST3	P40565	148 aa	Predicted RBP	2.24	□□□□□ -2.05
DOT6	YER088C	PDR8	Q06149	701 aa		2.24	□□□□□ -2.05
DOT6	YER088C	CRN1	Q06440	651 aa		2.24	□□□□□ -2.05
DOT6	YER088C	FRE3	Q08905	711 aa		2.24	□□□□□ -2.05
DOT6	YER088C	RRI1	Q12468	440 aa		2.24	□□□□□ -2.05
DOT6	YER088C	PSK1	P31374	1356 aa		2.23	□□□□□ -2.05
DOT6	YER088C	ASG1	P40467	964 aa		2.23	□□□□□ -2.05
DOT6	YER088C	PCI8	P40512	444 aa		2.23	□□□□□ -2.05
DOT6	YER088C	SNM1	P40993	198 aa		2.23	□□□□□ -2.05
DOT6	YER088C	LYS4	P49367	693 aa	Predicted RBP	2.23	□□□□□ -2.05
DOT6	YER088C	VPS4	P52917	437 aa		2.23	□□□□□ -2.05
DOT6	YER088C	ASI1	P54074	624 aa		2.23	□□□□□ -2.05
DOT6	YER088C	MCH4	Q08268	501 aa		2.23	□□□□□ -2.05
DOT6	YER088C	SSP2	Q08646	371 aa		2.23	□□□□□ -2.05
DOT6	YER088C	ATX2	Q12067	313 aa		2.23	□□□□□ -2.05
DOT6	YER088C	HER1	Q12276	1246 aa		2.23	□□□□□ -2.05
DOT6	YER088C	RAV1	P47104	1357 aa		2.22	□□□□□ -2.05
DOT6	YER088C	SSM4	P40318	1319 aa		2.22	□□□□□ -2.05
DOT6	YER088C	YCR006C	P25350	157 aa		2.22	□□□□□ -2.05
DOT6	YER088C	MRP20	P32387	263 aa		2.22	□□□□□ -2.05
DOT6	YER088C	RPT3	P33298	428 aa	Known RBP	2.22	□□□□□ -2.05
DOT6	YER088C	GND1	P38720	489 aa	Known RBP	2.22	□□□□□ -2.05
DOT6	YER088C	SEC31	P38968	1273 aa	Known RBP	2.22	□□□□□ -2.05
DOT6	YER088C	ECM10	P39987	644 aa		2.22	□□□□□ -2.05
DOT6	YER088C	JHD1	P40034	492 aa		2.22	□□□□□ -2.05
DOT6	YER088C	SIP4	P46954	829 aa		2.22	□□□□□ -2.05
DOT6	YER088C	CTK2	P46962	323 aa		2.22	□□□□□ -2.05
DOT6	YER088C	LYS20	P48570	428 aa	Known RBP	2.22	□□□□□ -2.05
DOT6	YER088C	GLO1	P50107	326 aa		2.22	□□□□□ -2.05
DOT6	YER088C	PIL1	P53252	339 aa	Known RBP	2.22	□□□□□ -2.05
DOT6	YER088C	REG1	Q00816	1014 aa		2.22	□□□□□ -2.05
DOT6	YER088C	SVL3	Q03088	825 aa	Known RBP	2.22	□□□□□ -2.05
DOT6	YER088C	RSM28	Q03430	361 aa		2.22	□□□□□ -2.05
DOT6	YER088C	ECM16	Q04217	1267 aa	Known RBP	2.22	□□□□□ -2.05
DOT6	YER088C	VMS1	Q04311	632 aa	Known RBP	2.22	□□□□□ -2.05
DOT6	YER088C	RAD9	P14737	1309 aa		2.22	□□□□□ -2.05
DOT6	YER088C	SPT7	P35177	1332 aa		2.22	□□□□□ -2.05
DOT6	YER088C	YFL068W	P0CX99	160 aa		2.22	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 151.6 ms