RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W YKE2P52553 114 aa5.8□□□□□ -1.48
VMS1YDR049W PNC1P53184 216 aaKnown RBP5.8□□□□□ -1.48
VMS1YDR049W YGR066CP53242 292 aa5.8□□□□□ -1.48
VMS1YDR049W YNL134CP53912 376 aaKnown RBP5.8□□□□□ -1.48
VMS1YDR049W ACS1Q01574 713 aa5.8□□□□□ -1.48
VMS1YDR049W TY2A-DR2Q03483 438 aa5.8□□□□□ -1.48
VMS1YDR049W GTO3Q04806 366 aa5.8□□□□□ -1.48
VMS1YDR049W RQC1Q05468 723 aaKnown RBP5.8□□□□□ -1.48
VMS1YDR049W NNT1Q05874 261 aa5.8□□□□□ -1.48
VMS1YDR049W HOS1Q12214 470 aa5.8□□□□□ -1.48
VMS1YDR049W TY2A-BQ12260 438 aa5.8□□□□□ -1.48
VMS1YDR049W TY2A-OR2Q12293 438 aa5.8□□□□□ -1.48
VMS1YDR049W TY2A-DR1Q12392 438 aa5.8□□□□□ -1.48
VMS1YDR049W TY2A-OR1Q12439 438 aa5.8□□□□□ -1.48
VMS1YDR049W YJR112W-AQ3E743 109 aa5.8□□□□□ -1.48
VMS1YDR049W TY2A-DR3Q99303 438 aa5.8□□□□□ -1.48
VMS1YDR049W VPS63O13549 108 aa5.79□□□□□ -1.48
VMS1YDR049W LPD1P09624 499 aaKnown RBP5.79□□□□□ -1.48
VMS1YDR049W MSB1P21339 1137 aaKnown RBP5.79□□□□□ -1.48
VMS1YDR049W MCM4P30665 933 aaKnown RBP5.79□□□□□ -1.48
VMS1YDR049W SYN8P31377 255 aa5.79□□□□□ -1.48
VMS1YDR049W YBL055CP34220 418 aaPredicted RBP5.79□□□□□ -1.48
VMS1YDR049W YKL070WP36087 169 aa5.79□□□□□ -1.48
VMS1YDR049W ERC1P38767 581 aa5.79□□□□□ -1.48
VMS1YDR049W SHQ1P40486 507 aaPredicted RBP5.79□□□□□ -1.48
VMS1YDR049W TIM21P53220 239 aa5.79□□□□□ -1.48
VMS1YDR049W CSL4P53859 292 aaPredicted RBP5.79□□□□□ -1.48
VMS1YDR049W NGL2Q03264 515 aaKnown RBP5.79□□□□□ -1.48
VMS1YDR049W ATG29Q12092 213 aa5.79□□□□□ -1.48
VMS1YDR049W ATG11Q12527 1178 aa5.79□□□□□ -1.48
VMS1YDR049W CDC4P07834 779 aa5.79□□□□□ -1.48
VMS1YDR049W YPK2P18961 677 aa5.79□□□□□ -1.48
VMS1YDR049W GID7P25569 745 aa5.79□□□□□ -1.48
VMS1YDR049W FAA1P30624 700 aaKnown RBP5.79□□□□□ -1.48
VMS1YDR049W PRO1P32264 428 aa5.79□□□□□ -1.48
VMS1YDR049W PRS1P32895 427 aaKnown RBP5.79□□□□□ -1.48
VMS1YDR049W YBL086CP38177 466 aa5.79□□□□□ -1.48
VMS1YDR049W YHR182WP38870 785 aa5.79□□□□□ -1.48
VMS1YDR049W SSN3P39073 555 aa5.79□□□□□ -1.48
VMS1YDR049W YTA12P40341 825 aa5.79□□□□□ -1.48
VMS1YDR049W YRB1P41920 201 aaKnown RBP5.79□□□□□ -1.48
VMS1YDR049W MRK1P50873 501 aa5.79□□□□□ -1.48
VMS1YDR049W SQS1P53866 767 aaKnown RBP5.79□□□□□ -1.48
VMS1YDR049W PET117Q02771 107 aa5.79□□□□□ -1.48
VMS1YDR049W RLI1Q03195 608 aaKnown RBP5.79□□□□□ -1.48
VMS1YDR049W FUS2Q05670 677 aa5.79□□□□□ -1.48
VMS1YDR049W YEH1Q07804 573 aa5.79□□□□□ -1.48
VMS1YDR049W TRE1Q08919 783 aa5.79□□□□□ -1.48
VMS1YDR049W LYS21Q12122 440 aaKnown RBP5.79□□□□□ -1.48
VMS1YDR049W TPK2P06245 380 aa5.78□□□□□ -1.48
VMS1YDR049W SNT1P25357 1226 aa5.78□□□□□ -1.48
VMS1YDR049W HXT1P32465 570 aa5.78□□□□□ -1.48
VMS1YDR049W SLA2P33338 968 aa5.78□□□□□ -1.48
VMS1YDR049W OCT1P35999 772 aa5.78□□□□□ -1.48
VMS1YDR049W RSM22P36056 628 aa5.78□□□□□ -1.48
VMS1YDR049W ALY1P36117 915 aa5.78□□□□□ -1.48
VMS1YDR049W THI2P38141 450 aa5.78□□□□□ -1.48
VMS1YDR049W TAE1P38340 232 aa5.78□□□□□ -1.48
VMS1YDR049W SCC4P40090 624 aa5.78□□□□□ -1.48
VMS1YDR049W DLD2P46681 530 aaKnown RBP5.78□□□□□ -1.48
VMS1YDR049W GCD14P46959 383 aaPredicted RBP5.78□□□□□ -1.48
VMS1YDR049W SMC3P47037 1230 aa5.78□□□□□ -1.48
VMS1YDR049W COQ6P53318 479 aa5.78□□□□□ -1.48
VMS1YDR049W HEF3P53978 1044 aaKnown RBP5.78□□□□□ -1.48
VMS1YDR049W RPN9Q04062 393 aaKnown RBP5.78□□□□□ -1.48
VMS1YDR049W CRF1Q04930 467 aa5.78□□□□□ -1.48
VMS1YDR049W RKM1Q08961 583 aaPredicted RBP5.78□□□□□ -1.48
VMS1YDR049W YPL260WQ08977 551 aa5.78□□□□□ -1.48
VMS1YDR049W RAP1P11938 827 aa5.77□□□□□ -1.49
VMS1YDR049W UBA1P22515 1024 aaKnown RBP5.77□□□□□ -1.49
VMS1YDR049W YPT7P32939 208 aa5.77□□□□□ -1.49
VMS1YDR049W MRPL4P36517 319 aa5.77□□□□□ -1.49
VMS1YDR049W ADE17P38009 592 aaKnown RBP5.77□□□□□ -1.49
VMS1YDR049W AFG3P39925 761 aa5.77□□□□□ -1.49
VMS1YDR049W OTU1P43558 301 aa5.77□□□□□ -1.49
VMS1YDR049W RMD9P53140 646 aaKnown RBP5.77□□□□□ -1.49
VMS1YDR049W ATG21Q02887 496 aa5.77□□□□□ -1.49
VMS1YDR049W MUB1Q03162 620 aa5.77□□□□□ -1.49
VMS1YDR049W RSM28Q03430 361 aa5.77□□□□□ -1.49
VMS1YDR049W PPN1Q04119 674 aa5.77□□□□□ -1.49
VMS1YDR049W YLL007CQ07799 665 aa5.77□□□□□ -1.49
VMS1YDR049W DSE3Q08729 430 aa5.77□□□□□ -1.49
VMS1YDR049W FMP40Q08968 688 aaPredicted RBP5.77□□□□□ -1.49
VMS1YDR049W ACM1Q08981 209 aa5.77□□□□□ -1.49
VMS1YDR049W TGS1Q12052 315 aa5.77□□□□□ -1.49
VMS1YDR049W YOL107WQ12239 342 aa5.77□□□□□ -1.49
VMS1YDR049W YLR278CQ05854 1341 aa5.77□□□□□ -1.49
VMS1YDR049W SSA3P09435 649 aaKnown RBP5.77□□□□□ -1.49
VMS1YDR049W ERG8P24521 451 aa5.77□□□□□ -1.49
VMS1YDR049W FLR1P38124 548 aa5.77□□□□□ -1.49
VMS1YDR049W SET5P38890 526 aaKnown RBP5.77□□□□□ -1.49
VMS1YDR049W PET100P38958 111 aa5.77□□□□□ -1.49
VMS1YDR049W JHD1P40034 492 aa5.77□□□□□ -1.49
VMS1YDR049W BUD8P41698 603 aa5.77□□□□□ -1.49
VMS1YDR049W MIG2P53035 382 aa5.77□□□□□ -1.49
VMS1YDR049W RMR1P53060 241 aa5.77□□□□□ -1.49
VMS1YDR049W YGR117CP53270 476 aa5.77□□□□□ -1.49
VMS1YDR049W YNR040WP53736 256 aa5.77□□□□□ -1.49
VMS1YDR049W TLG2Q08144 397 aa5.77□□□□□ -1.49
VMS1YDR049W VIK1Q12045 647 aa5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms