RNA–Protein interactions for RNA: YDL127W

PCL2, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL2, Length 927 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL2	YDL127W	YLR112W	Q12130	139 aa		4.65	□□□□□ -1.67
PCL2	YDL127W	YOR019W	Q99248	730 aa		4.65	□□□□□ -1.67
PCL2	YDL127W	CHO1	P08456	276 aa		4.64	□□□□□ -1.67
PCL2	YDL127W	CLB2	P24869	491 aa		4.64	□□□□□ -1.67
PCL2	YDL127W	RER1	P25560	188 aa		4.64	□□□□□ -1.67
PCL2	YDL127W	RKM3	P38222	552 aa		4.64	□□□□□ -1.67
PCL2	YDL127W	IME4	P41833	600 aa		4.64	□□□□□ -1.67
PCL2	YDL127W	DPB11	P47027	764 aa	Predicted RBP	4.64	□□□□□ -1.67
PCL2	YDL127W	SVL3	Q03088	825 aa	Known RBP	4.64	□□□□□ -1.67
PCL2	YDL127W	YML131W	Q03102	365 aa		4.64	□□□□□ -1.67
PCL2	YDL127W	CTL1	Q03220	320 aa	Known RBP	4.64	□□□□□ -1.67
PCL2	YDL127W	IZH1	Q03419	316 aa		4.64	□□□□□ -1.67
PCL2	YDL127W	GPN2	Q08726	347 aa	Predicted RBP	4.64	□□□□□ -1.67
PCL2	YDL127W	SPE2	P21182	396 aa		4.63	□□□□□ -1.67
PCL2	YDL127W	CBF2	P32504	956 aa		4.63	□□□□□ -1.67
PCL2	YDL127W	MNN2	P38069	597 aa		4.63	□□□□□ -1.67
PCL2	YDL127W	ARC40	P38328	384 aa	Known RBP	4.63	□□□□□ -1.67
PCL2	YDL127W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	RIP-Chip
PCL2	YDL127W	SLZ1	P40167	298 aa		4.63	□□□□□ -1.67
PCL2	YDL127W	YFR020W	P43600	232 aa		4.63	□□□□□ -1.67
PCL2	YDL127W	NNF2	P53253	936 aa		4.63	□□□□□ -1.67
PCL2	YDL127W	YMR178W	Q03219	274 aa	Known RBP	4.63	□□□□□ -1.67
PCL2	YDL127W	ARP9	Q05123	467 aa		4.63	□□□□□ -1.67
PCL2	YDL127W	NKP1	Q12493	238 aa		4.63	□□□□□ -1.67
PCL2	YDL127W	CBP1	P07252	654 aa		4.62	□□□□□ -1.67
PCL2	YDL127W	RPL42A	P0CX27	106 aa	Known RBP	4.62	□□□□□ -1.67
PCL2	YDL127W	RPL42B	P0CX28	106 aa	Known RBP	4.62	□□□□□ -1.67
PCL2	YDL127W	MRP20	P32387	263 aa		4.62	□□□□□ -1.67
PCL2	YDL127W	YKL050C	P35736	922 aa		4.62	□□□□□ -1.67
PCL2	YDL127W	PSD1	P39006	500 aa		4.62	□□□□□ -1.67
PCL2	YDL127W	UIP3	P39547	235 aa		4.62	□□□□□ -1.67
PCL2	YDL127W	YNL234W	P53857	426 aa		4.62	□□□□□ -1.67
PCL2	YDL127W	SKG3	Q06315	1026 aa		4.62	□□□□□ -1.67
PCL2	YDL127W	OPY2	Q06810	360 aa		4.62	□□□□□ -1.67
PCL2	YDL127W	GRS2	Q06817	618 aa		4.62	□□□□□ -1.67
PCL2	YDL127W	APL4	Q12028	832 aa		4.62	□□□□□ -1.67
PCL2	YDL127W	YFL068W	P0CX99	160 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	YLL066W-A	P0CY00	160 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	YLL067W-A	P0CY01	160 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	GUK1	P15454	187 aa	Known RBP	4.61	□□□□□ -1.67
PCL2	YDL127W	RPB8	P20436	146 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	YUR1	P26725	428 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	STV1	P37296	890 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	KTR3	P38130	404 aa	Predicted RBP	4.61	□□□□□ -1.67
PCL2	YDL127W	RFC1	P38630	861 aa	Known RBP	4.61	□□□□□ -1.67
PCL2	YDL127W	YNG2	P38806	282 aa	Known RBP	4.61	□□□□□ -1.67
PCL2	YDL127W	AXL2	P38928	823 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	YIL169C	P40442	995 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	TES1	P41903	349 aa	Known RBP	4.61	□□□□□ -1.67
PCL2	YDL127W	STB2	P46679	850 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	SCS3	P53012	380 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	CBK1	P53894	756 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	INA17	Q02888	182 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	SNO4	Q04902	237 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	YMR034C	Q05131	434 aa	Predicted RBP	4.61	□□□□□ -1.67
PCL2	YDL127W	HSP33	Q08914	237 aa	Known RBP	4.61	□□□□□ -1.67
PCL2	YDL127W	HSP32	Q08992	237 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	YOL087C	Q99247	1116 aa		4.61	□□□□□ -1.67
PCL2	YDL127W	PRE8	P23639	250 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	GAC1	P28006	793 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	SSH4	P32343	579 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	MIA40	P36046	403 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	ALY1	P36117	915 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	YPK3	P38070	525 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	DIA4	P38705	446 aa	Predicted RBP	4.6	□□□□□ -1.67
PCL2	YDL127W	MET30	P39014	640 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	SEC24	P40482	926 aa	Known RBP	4.6	□□□□□ -1.67
PCL2	YDL127W	IAH1	P41734	238 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	AAD10	P47182	288 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	SGF73	P53165	657 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	YTP1	P53584	459 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	YNR061C	P53747	219 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	YMR018W	Q04364	514 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	SSP2	Q08646	371 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	INP53	Q12271	1107 aa		4.6	□□□□□ -1.67
PCL2	YDL127W	FUM1	P08417	488 aa	Known RBP	4.59	□□□□□ -1.67
PCL2	YDL127W	YCR043C	P25361	127 aa		4.59	□□□□□ -1.67
PCL2	YDL127W	LEU5	P38702	357 aa		4.59	□□□□□ -1.67
PCL2	YDL127W	VID27	P40157	782 aa		4.59	□□□□□ -1.67
PCL2	YDL127W	YJR061W	P40355	935 aa		4.59	□□□□□ -1.67
PCL2	YDL127W	PIL1	P53252	339 aa	Known RBP	4.59	□□□□□ -1.67
PCL2	YDL127W	ESBP6	P53918	673 aa		4.59	□□□□□ -1.67
PCL2	YDL127W	BET4	Q00618	327 aa		4.59	□□□□□ -1.67
PCL2	YDL127W	YMR254C	Q04838	102 aa		4.59	□□□□□ -1.67
PCL2	YDL127W	PDB1	P32473	366 aa	Known RBP	4.58	□□□□□ -1.68
PCL2	YDL127W	SAD1	P43589	448 aa		4.58	□□□□□ -1.68
PCL2	YDL127W	ARC1	P46672	376 aa	Known RBP	4.58	□□□□□ -1.68
PCL2	YDL127W	BSC5	P53755	489 aa		4.58	□□□□□ -1.68
PCL2	YDL127W	TDA9	Q04545	1251 aa		4.58	□□□□□ -1.68
PCL2	YDL127W	PSR1	Q07800	427 aa		4.58	□□□□□ -1.68
PCL2	YDL127W	TAH18	Q12181	623 aa		4.58	□□□□□ -1.68
PCL2	YDL127W	SKM1	Q12469	655 aa		4.58	□□□□□ -1.68
PCL2	YDL127W	SNU114	P36048	1008 aa	Known RBP	4.57	□□□□□ -1.68
PCL2	YDL127W	BUR6	P40096	142 aa		4.57	□□□□□ -1.68
PCL2	YDL127W	FMP42	Q04991	504 aa		4.57	□□□□□ -1.68
PCL2	YDL127W	RSF1	Q05043	376 aa		4.57	□□□□□ -1.68
PCL2	YDL127W	ATG9	Q12142	997 aa		4.57	□□□□□ -1.68
PCL2	YDL127W	CDC24	P11433	854 aa	Predicted RBP	4.56	□□□□□ -1.68
PCL2	YDL127W	VMA16	P23968	213 aa		4.56	□□□□□ -1.68
PCL2	YDL127W	LCB1	P25045	558 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 99.9 ms