RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 MSH1P25846 959 aa2.87□□□□□ -1.95
snR54snR54 GEX2P36173 615 aa2.87□□□□□ -1.95
snR54snR54 RKM3P38222 552 aa2.87□□□□□ -1.95
snR54snR54 YMR254CQ04838 102 aa2.87□□□□□ -1.95
snR54snR54 YLR281CQ05863 155 aa2.87□□□□□ -1.95
snR54snR54 UTP21Q06078 939 aaPredicted RBP2.87□□□□□ -1.95
snR54snR54 VAM6Q07468 1049 aa2.87□□□□□ -1.95
snR54snR54 SWT1Q12104 458 aa2.87□□□□□ -1.95
snR54snR54 SRP54P20424 541 aaKnown RBP2.86□□□□□ -1.95
snR54snR54 CLB4P24871 460 aa2.86□□□□□ -1.95
snR54snR54 BZZ1P38822 633 aa2.86□□□□□ -1.95
snR54snR54 SGF73P53165 657 aa2.86□□□□□ -1.95
snR54snR54 YNL234WP53857 426 aa2.86□□□□□ -1.95
snR54snR54 SMA1Q02651 245 aa2.86□□□□□ -1.95
snR54snR54 TRS130Q03660 1102 aa2.86□□□□□ -1.95
snR54snR54 TIP41Q12199 356 aa2.86□□□□□ -1.95
snR54snR54 ATP2P00830 511 aaKnown RBP2.85□□□□□ -1.95
snR54snR54 CDC23P16522 626 aa2.85□□□□□ -1.95
snR54snR54 PTP2P29461 750 aa2.85□□□□□ -1.95
snR54snR54 SEC1P30619 724 aaKnown RBP2.85□□□□□ -1.95
snR54snR54 PDR3P33200 976 aa2.85□□□□□ -1.95
snR54snR54 GRX7P38068 203 aa2.85□□□□□ -1.95
snR54snR54 YIL161WP40449 235 aaKnown RBP2.85□□□□□ -1.95
snR54snR54 DCP2P53550 970 aaKnown RBP2.85□□□□□ -1.95
snR54snR54 YTP1P53584 459 aa2.85□□□□□ -1.95
snR54snR54 YNL181WP53878 407 aa2.85□□□□□ -1.95
snR54snR54 CRN1Q06440 651 aa2.85□□□□□ -1.95
snR54snR54 NCP1P16603 691 aaKnown RBP2.84□□□□□ -1.95
snR54snR54 TKL1P23254 680 aaKnown RBP2.84□□□□□ -1.95
snR54snR54 YHL041WP38730 149 aa2.84□□□□□ -1.95
snR54snR54 VPS27P40343 622 aaKnown RBP2.84□□□□□ -1.95
snR54snR54 HXT9P40885 567 aa2.84□□□□□ -1.95
snR54snR54 SWP82P43554 623 aa2.84□□□□□ -1.95
snR54snR54 SCW10Q04951 389 aa2.84□□□□□ -1.95
snR54snR54 RTT103Q05543 409 aa2.84□□□□□ -1.95
snR54snR54 MCP2Q06567 569 aa2.84□□□□□ -1.95
snR54snR54 PCD1Q12524 340 aa2.84□□□□□ -1.95
snR54snR54 EDE1P34216 1381 aa2.84□□□□□ -1.96
snR54snR54 BAR1P12630 587 aa2.83□□□□□ -1.96
snR54snR54 YEF3P16521 1044 aaKnown RBP2.83□□□□□ -1.96
snR54snR54 RAD24P32641 659 aa2.83□□□□□ -1.96
snR54snR54 TOM20P35180 183 aa2.83□□□□□ -1.96
snR54snR54 LHS1P36016 881 aa2.83□□□□□ -1.96
snR54snR54 NTR2P36118 322 aaPredicted RBP2.83□□□□□ -1.96
snR54snR54 RFC1P38630 861 aaKnown RBP2.83□□□□□ -1.96
snR54snR54 CUL3P53202 744 aa2.83□□□□□ -1.96
snR54snR54 EKI1Q03764 534 aa2.83□□□□□ -1.96
snR54snR54 BSC1Q12140 328 aa2.83□□□□□ -1.96
snR54snR54 TAH18Q12181 623 aa2.83□□□□□ -1.96
snR54snR54 RAP1P11938 827 aa2.82□□□□□ -1.96
snR54snR54 RPT2P40327 437 aaKnown RBP2.82□□□□□ -1.96
snR54snR54 YFR020WP43600 232 aa2.82□□□□□ -1.96
snR54snR54 CTK2P46962 323 aa2.82□□□□□ -1.96
snR54snR54 MAK10Q02197 733 aa2.82□□□□□ -1.96
snR54snR54 COX17Q12287 69 aa2.82□□□□□ -1.96
snR54snR54 TY2A-LR1P0C2J4 438 aa2.81□□□□□ -1.96
snR54snR54 TY2A-FP0CX61 438 aa2.81□□□□□ -1.96
snR54snR54 TY2A-GR2P0CX62 438 aa2.81□□□□□ -1.96
snR54snR54 APA1P16550 321 aaKnown RBP2.81□□□□□ -1.96
snR54snR54 TY2A-CP25383 438 aa2.81□□□□□ -1.96
snR54snR54 NUP120P35729 1037 aa2.81□□□□□ -1.96
snR54snR54 STV1P37296 890 aa2.81□□□□□ -1.96
snR54snR54 AAP1P37898 856 aaKnown RBP2.81□□□□□ -1.96
snR54snR54 YPK3P38070 525 aa2.81□□□□□ -1.96
snR54snR54 ECM10P39987 644 aa2.81□□□□□ -1.96
snR54snR54 MRX1P40050 688 aa2.81□□□□□ -1.96
snR54snR54 FET5P43561 622 aa2.81□□□□□ -1.96
snR54snR54 ATG27P46989 271 aa2.81□□□□□ -1.96
snR54snR54 COG1P53079 417 aa2.81□□□□□ -1.96
snR54snR54 ARC35P53731 342 aaKnown RBP2.81□□□□□ -1.96
snR54snR54 CTL1Q03220 320 aaKnown RBP2.81□□□□□ -1.96
snR54snR54 TY2A-DR2Q03483 438 aa2.81□□□□□ -1.96
snR54snR54 YDR415CQ04033 374 aaPredicted RBP2.81□□□□□ -1.96
snR54snR54 ARP10Q04549 284 aa2.81□□□□□ -1.96
snR54snR54 YLR352WQ06479 807 aa2.81□□□□□ -1.96
snR54snR54 TMA16Q08687 178 aa2.81□□□□□ -1.96
snR54snR54 TY2A-BQ12260 438 aa2.81□□□□□ -1.96
snR54snR54 TY2A-OR2Q12293 438 aa2.81□□□□□ -1.96
snR54snR54 TY2A-DR1Q12392 438 aa2.81□□□□□ -1.96
snR54snR54 TY2A-OR1Q12439 438 aa2.81□□□□□ -1.96
snR54snR54 TY2A-DR3Q99303 438 aa2.81□□□□□ -1.96
snR54snR54 SPO16P17122 198 aa2.8□□□□□ -1.96
snR54snR54 CLB2P24869 491 aa2.8□□□□□ -1.96
snR54snR54 SAC1P32368 623 aaKnown RBP2.8□□□□□ -1.96
snR54snR54 SOF1P33750 489 aaKnown RBP2.8□□□□□ -1.96
snR54snR54 PSF2P40359 213 aa2.8□□□□□ -1.96
snR54snR54 RTS2P40962 232 aa2.8□□□□□ -1.96
snR54snR54 CSL4P53859 292 aaPredicted RBP2.8□□□□□ -1.96
snR54snR54 FCP1Q03254 732 aa2.8□□□□□ -1.96
snR54snR54 RSM28Q03430 361 aa2.8□□□□□ -1.96
snR54snR54 YDL218WQ07629 317 aa2.8□□□□□ -1.96
snR54snR54 YOL159CQ08300 171 aa2.8□□□□□ -1.96
snR54snR54 NYV1Q12255 253 aa2.8□□□□□ -1.96
snR54snR54 GUK1P15454 187 aaKnown RBP2.79□□□□□ -1.96
snR54snR54 YCL049CP25577 312 aa2.79□□□□□ -1.96
snR54snR54 TRS65P32893 560 aa2.79□□□□□ -1.96
snR54snR54 IFA38P38286 347 aa2.79□□□□□ -1.96
snR54snR54 YJL070CP40361 888 aa2.79□□□□□ -1.96
snR54snR54 ASE1P50275 885 aa2.79□□□□□ -1.96
snR54snR54 CRZ1P53968 678 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 70.3 ms