RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFI1	YPL254W	TIF4631	P39935	952 aa	Known RBP	5.71	□□□□□ -1.49
HFI1	YPL254W	BAP3	P41815	604 aa		5.71	□□□□□ -1.49
HFI1	YPL254W	TDA10	P42938	290 aa		5.71	□□□□□ -1.49
HFI1	YPL254W	DAS1	P47005	663 aa		5.71	□□□□□ -1.49
HFI1	YPL254W	COS5	P47187	383 aa		5.71	□□□□□ -1.49
HFI1	YPL254W	VID30	P53076	958 aa		5.71	□□□□□ -1.49
HFI1	YPL254W	ESBP6	P53918	673 aa		5.71	□□□□□ -1.49
HFI1	YPL254W	NCS2	P53923	493 aa	Predicted RBP	5.71	□□□□□ -1.49
HFI1	YPL254W	CEF1	Q03654	590 aa	Predicted RBP	5.71	□□□□□ -1.49
HFI1	YPL254W	FAR8	Q05040	523 aa		5.71	□□□□□ -1.49
HFI1	YPL254W	RPS21B	Q3E754	87 aa	Known RBP	5.71	□□□□□ -1.49
HFI1	YPL254W	YMR085W	P0CF18	432 aa		5.71	□□□□□ -1.5
HFI1	YPL254W	DAL2	P25335	343 aa		5.71	□□□□□ -1.5
HFI1	YPL254W	CBF2	P32504	956 aa		5.71	□□□□□ -1.5
HFI1	YPL254W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
HFI1	YPL254W	MMS21	P38632	267 aa		5.71	□□□□□ -1.5
HFI1	YPL254W	CHS7	P38843	316 aa		5.71	□□□□□ -1.5
HFI1	YPL254W	BEM4	P39011	633 aa		5.71	□□□□□ -1.5
HFI1	YPL254W	MNN11	P46985	422 aa	Known RBP	5.71	□□□□□ -1.5
HFI1	YPL254W	SUB1	P54000	292 aa	Known RBP	5.71	□□□□□ -1.5
HFI1	YPL254W	CMS1	Q07897	291 aa	Known RBP	5.71	□□□□□ -1.5
HFI1	YPL254W	SGO1	Q08490	590 aa		5.71	□□□□□ -1.5
HFI1	YPL254W	ECM3	Q99252	613 aa		5.71	□□□□□ -1.5
HFI1	YPL254W	FKS1	P38631	1876 aa	Known RBP	5.7	□□□□□ -1.5
HFI1	YPL254W	CDC33	P07260	213 aa	Known RBP	5.7	□□□□□ -1.5
HFI1	YPL254W	SAM1	P10659	382 aa	Known RBP	5.7	□□□□□ -1.5
HFI1	YPL254W	DBF4	P32325	704 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	MUD1	P32605	298 aa	Known RBP	5.7	□□□□□ -1.5
HFI1	YPL254W	YSC83	P32792	385 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	YME1	P32795	747 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	TFC4	P33339	1025 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	UBP13	P38187	747 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	PHO88	P38264	188 aa	Predicted RBP	5.7	□□□□□ -1.5
HFI1	YPL254W	FMO1	P38866	432 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	GET2	P40056	285 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	YTA12	P40341	825 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	FIS1	P40515	155 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	UBC11	P52492	156 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	TAM41	P53230	385 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	SLI1	P53304	468 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	UBX4	P54730	416 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	GTR1	Q00582	310 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	TRM44	Q02648	567 aa	Known RBP	5.7	□□□□□ -1.5
HFI1	YPL254W	MTG1	Q03151	367 aa	Predicted RBP	5.7	□□□□□ -1.5
HFI1	YPL254W	YMR210W	Q03649	449 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	HMO1	Q03973	246 aa	Known RBP	5.7	□□□□□ -1.5
HFI1	YPL254W	YHM2	Q04013	314 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	TMA64	Q04600	565 aa	Known RBP	5.7	□□□□□ -1.5
HFI1	YPL254W	YDR222W	Q04925	415 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	RLP24	Q07915	199 aa	Known RBP	5.7	□□□□□ -1.5
HFI1	YPL254W	OSW1	Q08692	278 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	TAF10	Q12030	206 aa		5.7	□□□□□ -1.5
HFI1	YPL254W	SNF1	P06782	633 aa	Known RBP	5.69	□□□□□ -1.5
HFI1	YPL254W	ARD1	P07347	238 aa	Predicted RBP	5.69	□□□□□ -1.5
HFI1	YPL254W	SPO16	P17122	198 aa		5.69	□□□□□ -1.5
HFI1	YPL254W	IMG2	P25642	146 aa	Predicted RBP	5.69	□□□□□ -1.5
HFI1	YPL254W	GYP6	P32806	458 aa		5.69	□□□□□ -1.5
HFI1	YPL254W	YBL055C	P34220	418 aa	Predicted RBP	5.69	□□□□□ -1.5
HFI1	YPL254W	MRX3	P38172	270 aa		5.69	□□□□□ -1.5
HFI1	YPL254W	HXT6	P39003	570 aa	Known RBP	5.69	□□□□□ -1.5
HFI1	YPL254W	HXT7	P39004	570 aa		5.69	□□□□□ -1.5
HFI1	YPL254W	NUP60	P39705	539 aa		5.69	□□□□□ -1.5
HFI1	YPL254W	ASG1	P40467	964 aa		5.69	□□□□□ -1.5
HFI1	YPL254W	MKT1	P40850	830 aa	Known RBP	5.69	□□□□□ -1.5
HFI1	YPL254W	NOP9	P47077	666 aa	Known RBP	5.69	□□□□□ -1.5
HFI1	YPL254W	CNM67	P53865	581 aa	Known RBP	5.69	□□□□□ -1.5
HFI1	YPL254W	YNL040W	P53960	456 aa	Predicted RBP	5.69	□□□□□ -1.5
HFI1	YPL254W	PRP3	Q03338	469 aa	Predicted RBP	5.69	□□□□□ -1.5
HFI1	YPL254W	UFO1	Q04511	668 aa		5.69	□□□□□ -1.5
HFI1	YPL254W	CRD1	Q07560	283 aa		5.69	□□□□□ -1.5
HFI1	YPL254W	VHS3	Q08438	674 aa		5.69	□□□□□ -1.5
HFI1	YPL254W	HIF1	Q12373	385 aa		5.69	□□□□□ -1.5
HFI1	YPL254W	PGK1	P00560	416 aa	Known RBP	5.68	□□□□□ -1.5
HFI1	YPL254W	ILV2	P07342	687 aa	Known RBP	5.68	□□□□□ -1.5
HFI1	YPL254W	PEP5	P12868	1029 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	IME1	P21190	360 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	MVD1	P32377	396 aa	Known RBP	5.68	□□□□□ -1.5
HFI1	YPL254W	EUG1	P32474	517 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	RAD5	P32849	1169 aa	Predicted RBP	5.68	□□□□□ -1.5
HFI1	YPL254W	SHP1	P34223	423 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	RPC37	P36121	282 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	CCL1	P37366	393 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	RIX1	P38883	763 aa	Predicted RBP	5.68	□□□□□ -1.5
HFI1	YPL254W	SPC72	P39723	622 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	ACA1	P39970	489 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	ILM1	P47155	203 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	LIF1	P53150	421 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	YGR111W	P53265	400 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	MUK1	Q02866	612 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	SPC24	Q04477	213 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	CUR1	Q06469	252 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	SEC39	Q12745	709 aa		5.68	□□□□□ -1.5
HFI1	YPL254W	CMD1	P06787	147 aa	Known RBP	5.67	□□□□□ -1.5
HFI1	YPL254W	RAD10	P06838	210 aa		5.67	□□□□□ -1.5
HFI1	YPL254W	RPS21A	P0C0V8	87 aa	Known RBP	5.67	□□□□□ -1.5
HFI1	YPL254W	TCP1	P12612	559 aa	Known RBP	5.67	□□□□□ -1.5
HFI1	YPL254W	HEM15	P16622	393 aa		5.67	□□□□□ -1.5
HFI1	YPL254W	TPS2	P31688	896 aa	Known RBP	5.67	□□□□□ -1.5
HFI1	YPL254W	EFB1	P32471	206 aa	Known RBP	5.67	□□□□□ -1.5
HFI1	YPL254W	YBR032W	P38223	100 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 74 ms