RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	SPC29	P33419	253 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	MDJ1	P35191	511 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	CTF13	P35203	478 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	DID4	P36108	232 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	RFC5	P38251	354 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	PZF1	P39933	429 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	UBP9	P39967	754 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	SPF1	P39986	1215 aa	Known RBP	5.05	□□□□□ -1.6
SEC39	YLR440C	YJR056C	P47115	236 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	RPA14	P50106	137 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	AIM14	P53109	570 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	CAF120	P53836	1060 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	YDR514C	Q04408	483 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	GTB1	Q04924	702 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	RSF1	Q05043	376 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	PUS5	Q06244	254 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	TDA5	Q06417	326 aa	Known RBP	5.05	□□□□□ -1.6
SEC39	YLR440C	NTO1	Q12311	748 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	LDB17	Q12342	491 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	NSI1	Q12457	570 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	RRP12	Q12754	1228 aa	Known RBP	5.05	□□□□□ -1.6
SEC39	YLR440C	YCL001W-B	Q96VH2	84 aa		5.05	□□□□□ -1.6
SEC39	YLR440C	IPP1	P00817	287 aa	Known RBP	5.04	□□□□□ -1.6
SEC39	YLR440C	AI4	P03878	556 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	HXK2	P04807	486 aa	Known RBP	5.04	□□□□□ -1.6
SEC39	YLR440C	DBP5	P20449	482 aa	Known RBP	5.04	□□□□□ -1.6
SEC39	YLR440C	VMA16	P23968	213 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	YCR101C	P25607	182 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	ATP11	P32453	318 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	RPD3	P32561	433 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	MKS1	P34072	584 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	NTH2	P35172	780 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	MYO3	P36006	1272 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	PFF1	P38244	976 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	REV7	P38927	245 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	SOP4	P39543	234 aa	Predicted RBP	5.04	□□□□□ -1.6
SEC39	YLR440C	LYS14	P40971	790 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	GLG2	P47011	380 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	SAM37	P50110	327 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	YGR127W	P53275	312 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	WAR1	Q03631	944 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	YAP6	Q03935	383 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	YML082W	Q04533	649 aa	Known RBP	5.04	□□□□□ -1.6
SEC39	YLR440C	DFG5	Q05031	458 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	YPR091C	Q06833	770 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	SRO7	Q12038	1033 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	HER1	Q12276	1246 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	PNS1	Q12412	539 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	GRX6	Q12438	231 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	APM4	Q99186	491 aa		5.04	□□□□□ -1.6
SEC39	YLR440C	ADE3	P07245	946 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	SSA3	P09435	649 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	TUB1	P09733	447 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	SAM1	P10659	382 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	PHO81	P17442	1178 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	RAD57	P25301	460 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	CTR86	P25355	563 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	ERG3	P32353	365 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	FRD1	P32614	470 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	RAD24	P32641	659 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	SQT1	P35184	431 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	DBP7	P36120	742 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	AAP1	P37898	856 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	SSH1	P38353	490 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	LNP1	P38878	278 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	SEN34	P39707	275 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	SOK1	P40317	901 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	VHR1	P40522	640 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	ERR3	P42222	437 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	BNA3	P47039	444 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	YNL181W	P53878	407 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	VAC7	P53950	1165 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	YPL071C	Q02864	156 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	NBA1	Q08229	501 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	GPN2	Q08726	347 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	AKR2	Q12013	749 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	TGL5	Q12043	749 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	SNU23	Q12368	194 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	PHO5	P00635	467 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	PDC1	P06169	563 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	LPD1	P09624	499 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	GCD2	P12754	651 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	CHS2	P14180	963 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	RNR1	P21524	888 aa	Known RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	GID7	P25569	745 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	SRP101	P32916	621 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	YBR225W	P38321	900 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	OAF1	P39720	1047 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC39	YLR440C	VAB2	P40003	282 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	ATM1	P40416	690 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	ASG1	P40467	964 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	FET5	P43561	622 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	YFL034W	P43564	1073 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	CCC1	P47818	322 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	HFM1	P51979	1187 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	YGR122W	P53272	402 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	SOL4	P53315	255 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	COQ6	P53318	479 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	MFM1	Q02783	413 aa		5.03	□□□□□ -1.6
SEC39	YLR440C	OAZ1	Q02803	292 aa		5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms